; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026262 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026262
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:33542243..33543514
RNA-Seq ExpressionLag0026262
SyntenyLag0026262
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3453480.1 reverse transcriptase [Gossypium australe]4.0e-2047.17Show/hide
Query:  MKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIKDK--LGT
        MK  CWNARGLG+PRA+R LR+ +   +PHL+F+METK DS   DR++ S  +    +V ++GS GGL + W  +  V + SY + HID +IK++     
Subjt:  MKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIKDK--LGT

Query:  WRFTGF
        WRFTGF
Subjt:  WRFTGF

KAA3467350.1 reverse transcriptase [Gossypium australe]2.0e-1944.23Show/hide
Query:  MKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIK--DKLGT
        MK++CWN RGLG+PRA+R LRH +   NPHL+F+METK D  + +R++    +     V ++GS GGL + W  + +V + S+ + HID +IK  D +  
Subjt:  MKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIK--DKLGT

Query:  WRFT
        WRFT
Subjt:  WRFT

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]1.5e-2252.88Show/hide
Query:  MKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIKDKLGTWR
        MK+LCWN  GLGNP   R LR+ V    P L+F+ ETK +     R K  L +D   SV S G SGGLM+LWNS++ V I S   GHID++I DK G+WR
Subjt:  MKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIKDKLGTWR

Query:  FTGF
        FTGF
Subjt:  FTGF

XP_030505962.1 uncharacterized protein LOC115720894 [Cannabis sativa]1.5e-1933.88Show/hide
Query:  MKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIKDKLG-TW
        M  + WNARGLGNP A R L   V   NP L+F+METK  +G   R K SL +     V   G  GG+M+LW     V + S    H D     + G  W
Subjt:  MKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIKDKLG-TW

Query:  RFT---GFME-ILKQIKGASLGILTQVI--------NSLGEEARWSVIKLR-KIGQMHPQAAQME------------KSRLKGSLKQAIKRKEDEVQALY
         F+   GF E + K+     +  L  V         ++L E   W +I  +   G M P+   ++             +R  G LK  I + +  V  + 
Subjt:  RFT---GFME-ILKQIKGASLGILTQVI--------NSLGEEARWSVIKLR-KIGQMHPQAAQME------------KSRLKGSLKQAIKRKEDEVQALY

Query:  AVESDQ--NWESILNAESELDDLLEEEEEYWRIRSRDDWLKSGDR
         + S    +  ++  AES LDDLL +EE+YW+ RSR DWL+SGDR
Subjt:  AVESDQ--NWESILNAESELDDLLEEEEEYWRIRSRDDWLKSGDR

XP_042950313.1 uncharacterized protein LOC122282426 [Carya illinoinensis]5.2e-2050.96Show/hide
Query:  MKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIK-DKLGTW
        MKT+CWN+RGLGNP  IRALR  +    P L+F+ ETK  +   D +K  L +   FSV S+G SGGL +LWNS+  V + S+ + HID  IK D L  W
Subjt:  MKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIK-DKLGTW

Query:  RFTG
        RFTG
Subjt:  RFTG

TrEMBL top hitse value%identityAlignment
A0A2N9G1F9 Uncharacterized protein2.3e-2146.79Show/hide
Query:  PVGRMKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIKDKL
        P   M  L WN +GLGNP A+RAL H V    P ++F+METK D+G+ + I+  L +D  F+VPS G SGGL +LW ++ EV+I +Y + HID  +  K 
Subjt:  PVGRMKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIKDKL

Query:  G-TWRFTGF
           WR TGF
Subjt:  G-TWRFTGF

A0A2N9G8I6 Reverse transcriptase domain-containing protein2.3e-2146.79Show/hide
Query:  PVGRMKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIKDKL
        P   M  L WN +GLGNP A+RAL H V    P ++F+METK D+G+ + I+  L +D  F+VPS G SGGL +LW ++ EV+I +Y + HID  +  K 
Subjt:  PVGRMKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIKDKL

Query:  G-TWRFTGF
           WR TGF
Subjt:  G-TWRFTGF

A0A2N9IBI9 Reverse transcriptase domain-containing protein2.3e-2146.79Show/hide
Query:  PVGRMKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIKDKL
        P   M  L WN +GLGNP A+RAL H V    P ++F+METK D+G+ + I+  L +D  F+VPS G SGGL +LW ++ EV+I +Y + HID  +  K 
Subjt:  PVGRMKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIKDKL

Query:  G-TWRFTGF
           WR TGF
Subjt:  G-TWRFTGF

A0A6J1DUG8 uncharacterized protein LOC1110241357.1e-2352.88Show/hide
Query:  MKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIKDKLGTWR
        MK+LCWN  GLGNP   R LR+ V    P L+F+ ETK +     R K  L +D   SV S G SGGLM+LWNS++ V I S   GHID++I DK G+WR
Subjt:  MKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIKDKLGTWR

Query:  FTGF
        FTGF
Subjt:  FTGF

A0A803Q6Y1 Uncharacterized protein3.0e-2131.97Show/hide
Query:  ISAEAVDQPVGRMKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHI
        ++  A+  P   MK L WNA GLGNP A R LR  V    PH++FIMETK D     R + +L++     VP  G SGGL++LW    +V + +Y     
Subjt:  ISAEAVDQPVGRMKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVFSVPSKGSSGGLMILWNSETEVLISSYLEGHI

Query:  DTMIKDKLG-TWRFTGFMEILKQIKGASLGILTQVINSLGEEARWSVI--------KLRKIGQMHPQAAQMEKSR-------------------------
        D  IK   G +W F+ F    +  K      L +    +     W VI           K+G       QM+K R                         
Subjt:  DTMIKDKLG-TWRFTGFMEILKQIKGASLGILTQVINSLGEEARWSVI--------KLRKIGQMHPQAAQMEKSR-------------------------

Query:  ----LKGSLKQAIKRKEDEVQALYAVESDQNWESIL---NAESELDDLLEEEEEYWRIRSRDDWLKSGD
              G++K+ IK    EV+ L   ++  N ES+      E  LD+LL +EE YW+ RSR DWL+SGD
Subjt:  ----LKGSLKQAIKRKEDEVQALYAVESDQNWESIL---NAESELDDLLEEEEEYWRIRSRDDWLKSGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCAAGAGGATACACAAATCATGGTCAGCCAACTAGGAAAAAGACATGGGCTAGAATCTTCTGTGGAATGTGACACCAACAAGAAACTGAAAACTAAATGCTTCGA
GGAAATCAGAGGGATATCGGCGGAGGCTGTGGATCAGCCCGTCGGACGCATGAAAACATTATGCTGGAACGCTCGAGGATTGGGGAATCCTCGAGCGATCCGAGCGCTCC
GCCATTTTGTTGGAAGCTTAAATCCCCACTTGATCTTCATCATGGAAACGAAATGTGACTCTGGGAAATGTGATAGAATAAAAGCTAGTTTACAATATGACTTTGTGTTC
AGTGTGCCCAGCAAAGGTAGTAGTGGAGGGCTTATGATCCTTTGGAATTCGGAGACTGAGGTTTTGATTAGCTCCTATTTAGAGGGGCATATTGACACTATGATCAAAGA
TAAGTTGGGTACTTGGCGCTTCACAGGGTTTATGGAAATCCTGAAACAGATAAAAGGCGCTTCTCTTGGGATTTTAACTCAGGTGATAAATTCACTTGGAGAAGAGGCAA
GATGGAGCGTAATCAAATTAAGAAAGATTGGACAGATGCATCCACAAGCTGCACAAATGGAAAAATCAAGGTTGAAAGGCAGCTTGAAACAAGCCATCAAGAGGAAAGAA
GACGAAGTTCAGGCTTTATACGCGGTTGAATCTGACCAGAATTGGGAGAGTATACTGAATGCAGAATCCGAGCTCGATGACCTCCTTGAGGAAGAAGAAGAATATTGGCG
GATCCGTTCTAGAGATGATTGGTTAAAAAGCGGAGACAGAACACAAAATGGTTCCATGCAAAAGCTTCTCAACGAAAAAAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGCAAGAGGATACACAAATCATGGTCAGCCAACTAGGAAAAAGACATGGGCTAGAATCTTCTGTGGAATGTGACACCAACAAGAAACTGAAAACTAAATGCTTCGA
GGAAATCAGAGGGATATCGGCGGAGGCTGTGGATCAGCCCGTCGGACGCATGAAAACATTATGCTGGAACGCTCGAGGATTGGGGAATCCTCGAGCGATCCGAGCGCTCC
GCCATTTTGTTGGAAGCTTAAATCCCCACTTGATCTTCATCATGGAAACGAAATGTGACTCTGGGAAATGTGATAGAATAAAAGCTAGTTTACAATATGACTTTGTGTTC
AGTGTGCCCAGCAAAGGTAGTAGTGGAGGGCTTATGATCCTTTGGAATTCGGAGACTGAGGTTTTGATTAGCTCCTATTTAGAGGGGCATATTGACACTATGATCAAAGA
TAAGTTGGGTACTTGGCGCTTCACAGGGTTTATGGAAATCCTGAAACAGATAAAAGGCGCTTCTCTTGGGATTTTAACTCAGGTGATAAATTCACTTGGAGAAGAGGCAA
GATGGAGCGTAATCAAATTAAGAAAGATTGGACAGATGCATCCACAAGCTGCACAAATGGAAAAATCAAGGTTGAAAGGCAGCTTGAAACAAGCCATCAAGAGGAAAGAA
GACGAAGTTCAGGCTTTATACGCGGTTGAATCTGACCAGAATTGGGAGAGTATACTGAATGCAGAATCCGAGCTCGATGACCTCCTTGAGGAAGAAGAAGAATATTGGCG
GATCCGTTCTAGAGATGATTGGTTAAAAAGCGGAGACAGAACACAAAATGGTTCCATGCAAAAGCTTCTCAACGAAAAAAAGAAATAG
Protein sequenceShow/hide protein sequence
MQQEDTQIMVSQLGKRHGLESSVECDTNKKLKTKCFEEIRGISAEAVDQPVGRMKTLCWNARGLGNPRAIRALRHFVGSLNPHLIFIMETKCDSGKCDRIKASLQYDFVF
SVPSKGSSGGLMILWNSETEVLISSYLEGHIDTMIKDKLGTWRFTGFMEILKQIKGASLGILTQVINSLGEEARWSVIKLRKIGQMHPQAAQMEKSRLKGSLKQAIKRKE
DEVQALYAVESDQNWESILNAESELDDLLEEEEEYWRIRSRDDWLKSGDRTQNGSMQKLLNEKKK