; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026263 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026263
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionsigma factor binding protein 2, chloroplastic-like
Genome locationchr10:33552165..33552569
RNA-Seq ExpressionLag0026263
SyntenyLag0026263
Gene Ontology termsGO:0051091 - positive regulation of DNA-binding transcription factor activity (biological process)
InterPro domainsIPR008889 - VQ
IPR039335 - Sigma factor binding protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443611.1 PREDICTED: uncharacterized protein LOC103487167 [Cucumis melo]6.3e-2455.15Show/hide
Query:  MDPSLIVGDVQETT--KKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKFPSPSVRSPETDLPKKPEEDDDNDDELLL
        MD +L+V ++  TT  KKK TRKRKS +   QPLKVVYISNPM V TSA+EFRALVQ LTGRDAEFPDP+KF   S      DL KK   D   DDE  L
Subjt:  MDPSLIVGDVQETT--KKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKFPSPSVRSPETDLPKKPEEDDDNDDELLL

Query:  LDLAAMDDSSSDDFLEGSYGTLEDMFTRDMVEKLAA
        L    +D S  DDF   S+ +LED+  RD++E   A
Subjt:  LDLAAMDDSSSDDFLEGSYGTLEDMFTRDMVEKLAA

XP_011652185.1 uncharacterized protein LOC105434994 [Cucumis sativus]9.0e-2355.07Show/hide
Query:  MDPSLIVGDVQETTKK--KATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKF-PSPSVR-SPETDLPKKPEEDDDNDDEL
        MD SL+V ++  T KK  K TRKRKS +   QPLKVVYISNPM V TSA+EFRALVQ LTGRDAEFPDPTKF P+ S     + D+ KK    +  +DE 
Subjt:  MDPSLIVGDVQETTKK--KATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKF-PSPSVR-SPETDLPKKPEEDDDNDDEL

Query:  LLLDLAAMDDSSSDDFLEGSYGTLEDMFTRDMVEKLAA
         LL    +D S  DDFL  SY +LED+  RD++E   A
Subjt:  LLLDLAAMDDSSSDDFLEGSYGTLEDMFTRDMVEKLAA

XP_022147780.1 sigma factor binding protein 2, chloroplastic-like [Momordica charantia]5.3e-2355.81Show/hide
Query:  MDPSLIVGDVQETTKKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKFPSPSVRSPETDLPKKPEEDDDNDDELLLLD
        MD +LIV +++    KK TRKRK    KNQPLKVVYISNPM V TSA+EFRALVQ LTGRDAEFPDP KF   S+   E +L K  E DDD +     LD
Subjt:  MDPSLIVGDVQETTKKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKFPSPSVRSPETDLPKKPEEDDDNDDELLLLD

Query:  LAAMDDSSSDDFLEGSYGTLEDMFTRDMV
        +A   + S+DDFLE  Y + E+M  R+M+
Subjt:  LAAMDDSSSDDFLEGSYGTLEDMFTRDMV

XP_022941301.1 uncharacterized protein LOC111446639 [Cucurbita moschata]5.3e-2359.26Show/hide
Query:  MDPSLIVGDVQETTKKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDA-EFPDPTKFPSPSVRSPETDLPKKPEEDDDNDDELLLL
        M+ SL+  DV+E  +K+  R RK  D KNQPLKVVYISNPM VQ SAAEFR LVQ LTG+DA +FP      S SV++PET++ K     DD+DDE LLL
Subjt:  MDPSLIVGDVQETTKKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDA-EFPDPTKFPSPSVRSPETDLPKKPEEDDDNDDELLLL

Query:  DLAAMDDSSSDDFLEGSYGTLEDMFTRDMVEKLAA
          AAM+D SSD FL GSY + E +F RDMV+KLAA
Subjt:  DLAAMDDSSSDDFLEGSYGTLEDMFTRDMVEKLAA

XP_023539403.1 uncharacterized protein LOC111800056 [Cucurbita pepo subsp. pepo]2.3e-2659.26Show/hide
Query:  MDPSLIVGDVQETTKKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDA-EFPDPTKFPSPSVRSPETDLPKKPEEDDDNDDELLLL
        M+ SL+  DV+E  +K+  RKRK  D KNQPLKVVYISNPM VQ SAAEFR LVQ LTG+DA +FP     PS SV +PET++ K  ++DDD+D +LLL 
Subjt:  MDPSLIVGDVQETTKKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDA-EFPDPTKFPSPSVRSPETDLPKKPEEDDDNDDELLLL

Query:  DLAAMDDSSSDDFLEGSYGTLEDMFTRDMVEKLAA
          AA+ + SSDDFL GSY +LE +F RDMV++LAA
Subjt:  DLAAMDDSSSDDFLEGSYGTLEDMFTRDMVEKLAA

TrEMBL top hitse value%identityAlignment
A0A0A0LFH5 VQ domain-containing protein4.4e-2355.07Show/hide
Query:  MDPSLIVGDVQETTKK--KATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKF-PSPSVR-SPETDLPKKPEEDDDNDDEL
        MD SL+V ++  T KK  K TRKRKS +   QPLKVVYISNPM V TSA+EFRALVQ LTGRDAEFPDPTKF P+ S     + D+ KK    +  +DE 
Subjt:  MDPSLIVGDVQETTKK--KATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKF-PSPSVR-SPETDLPKKPEEDDDNDDEL

Query:  LLLDLAAMDDSSSDDFLEGSYGTLEDMFTRDMVEKLAA
         LL    +D S  DDFL  SY +LED+  RD++E   A
Subjt:  LLLDLAAMDDSSSDDFLEGSYGTLEDMFTRDMVEKLAA

A0A1S3B8H6 uncharacterized protein LOC1034871673.0e-2455.15Show/hide
Query:  MDPSLIVGDVQETT--KKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKFPSPSVRSPETDLPKKPEEDDDNDDELLL
        MD +L+V ++  TT  KKK TRKRKS +   QPLKVVYISNPM V TSA+EFRALVQ LTGRDAEFPDP+KF   S      DL KK   D   DDE  L
Subjt:  MDPSLIVGDVQETT--KKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKFPSPSVRSPETDLPKKPEEDDDNDDELLL

Query:  LDLAAMDDSSSDDFLEGSYGTLEDMFTRDMVEKLAA
        L    +D S  DDF   S+ +LED+  RD++E   A
Subjt:  LDLAAMDDSSSDDFLEGSYGTLEDMFTRDMVEKLAA

A0A5D3DPQ4 Sigma factor binding protein 23.0e-2455.15Show/hide
Query:  MDPSLIVGDVQETT--KKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKFPSPSVRSPETDLPKKPEEDDDNDDELLL
        MD +L+V ++  TT  KKK TRKRKS +   QPLKVVYISNPM V TSA+EFRALVQ LTGRDAEFPDP+KF   S      DL KK   D   DDE  L
Subjt:  MDPSLIVGDVQETT--KKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKFPSPSVRSPETDLPKKPEEDDDNDDELLL

Query:  LDLAAMDDSSSDDFLEGSYGTLEDMFTRDMVEKLAA
        L    +D S  DDF   S+ +LED+  RD++E   A
Subjt:  LDLAAMDDSSSDDFLEGSYGTLEDMFTRDMVEKLAA

A0A6J1D137 sigma factor binding protein 2, chloroplastic-like2.6e-2355.81Show/hide
Query:  MDPSLIVGDVQETTKKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKFPSPSVRSPETDLPKKPEEDDDNDDELLLLD
        MD +LIV +++    KK TRKRK    KNQPLKVVYISNPM V TSA+EFRALVQ LTGRDAEFPDP KF   S+   E +L K  E DDD +     LD
Subjt:  MDPSLIVGDVQETTKKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKFPSPSVRSPETDLPKKPEEDDDNDDELLLLD

Query:  LAAMDDSSSDDFLEGSYGTLEDMFTRDMV
        +A   + S+DDFLE  Y + E+M  R+M+
Subjt:  LAAMDDSSSDDFLEGSYGTLEDMFTRDMV

A0A6J1FKR4 uncharacterized protein LOC1114466392.6e-2359.26Show/hide
Query:  MDPSLIVGDVQETTKKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDA-EFPDPTKFPSPSVRSPETDLPKKPEEDDDNDDELLLL
        M+ SL+  DV+E  +K+  R RK  D KNQPLKVVYISNPM VQ SAAEFR LVQ LTG+DA +FP      S SV++PET++ K     DD+DDE LLL
Subjt:  MDPSLIVGDVQETTKKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDA-EFPDPTKFPSPSVRSPETDLPKKPEEDDDNDDELLLL

Query:  DLAAMDDSSSDDFLEGSYGTLEDMFTRDMVEKLAA
          AAM+D SSD FL GSY + E +F RDMV+KLAA
Subjt:  DLAAMDDSSSDDFLEGSYGTLEDMFTRDMVEKLAA

SwissProt top hitse value%identityAlignment
O80669 Sigma factor binding protein 2, chloroplastic6.8e-0543.42Show/hide
Query:  TKKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEF--PDPTKFPSPSVRSP-ETDLPKKP
        T+    +KRKS    ++P+KV YISNPM V+T  ++FR LVQ LTG+DA    P PT F +  +  P E+++  +P
Subjt:  TKKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEF--PDPTKFPSPSVRSP-ETDLPKKP

Q9LDH1 Sigma factor binding protein 1, chloroplastic4.2e-0750.85Show/hide
Query:  KKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKFPSPS
        +K+ +++K     N+P+KV YISNPM VQT A++FR LVQ LTG+DA    P    SPS
Subjt:  KKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKFPSPS

Arabidopsis top hitse value%identityAlignment
AT2G41180.1 VQ motif-containing protein4.8e-0643.42Show/hide
Query:  TKKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEF--PDPTKFPSPSVRSP-ETDLPKKP
        T+    +KRKS    ++P+KV YISNPM V+T  ++FR LVQ LTG+DA    P PT F +  +  P E+++  +P
Subjt:  TKKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEF--PDPTKFPSPSVRSP-ETDLPKKP

AT3G56710.1 sigma factor binding protein 13.0e-0850.85Show/hide
Query:  KKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKFPSPS
        +K+ +++K     N+P+KV YISNPM VQT A++FR LVQ LTG+DA    P    SPS
Subjt:  KKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKFPSPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCAAGTTTGATTGTTGGCGACGTGCAAGAGACGACGAAGAAGAAAGCAACGAGGAAAAGAAAATCCCCTGACCCGAAGAACCAACCCCTCAAAGTTGTCTACAT
ATCCAACCCCATGTGGGTTCAAACCAGCGCCGCTGAATTCCGAGCCTTGGTTCAACTACTCACTGGCCGAGACGCCGAGTTCCCGGACCCGACCAAGTTTCCATCCCCCT
CGGTCCGTTCTCCGGAGACAGACCTTCCGAAGAAACCAGAAGAAGACGACGACAACGACGACGAACTACTGTTACTTGATTTGGCTGCAATGGATGATTCCAGCAGCGAT
GATTTTCTTGAGGGTTCGTATGGGACTTTGGAGGATATGTTCACGAGGGATATGGTGGAGAAATTGGCGGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCAAGTTTGATTGTTGGCGACGTGCAAGAGACGACGAAGAAGAAAGCAACGAGGAAAAGAAAATCCCCTGACCCGAAGAACCAACCCCTCAAAGTTGTCTACAT
ATCCAACCCCATGTGGGTTCAAACCAGCGCCGCTGAATTCCGAGCCTTGGTTCAACTACTCACTGGCCGAGACGCCGAGTTCCCGGACCCGACCAAGTTTCCATCCCCCT
CGGTCCGTTCTCCGGAGACAGACCTTCCGAAGAAACCAGAAGAAGACGACGACAACGACGACGAACTACTGTTACTTGATTTGGCTGCAATGGATGATTCCAGCAGCGAT
GATTTTCTTGAGGGTTCGTATGGGACTTTGGAGGATATGTTCACGAGGGATATGGTGGAGAAATTGGCGGCCTGA
Protein sequenceShow/hide protein sequence
MDPSLIVGDVQETTKKKATRKRKSPDPKNQPLKVVYISNPMWVQTSAAEFRALVQLLTGRDAEFPDPTKFPSPSVRSPETDLPKKPEEDDDNDDELLLLDLAAMDDSSSD
DFLEGSYGTLEDMFTRDMVEKLAA