; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026269 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026269
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr10:33658877..33659304
RNA-Seq ExpressionLag0026269
SyntenyLag0026269
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_012831557.1 PREDICTED: uncharacterized protein LOC105952539 [Erythranthe guttata]1.7e-1241.94Show/hide
Query:  VADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLVQDKLL
        V DSGAS HI +++SLF+ +  AH   V+ P ++   V  +GD++L   + LH+V Y+PEF +N+LSV+ALL      + F   S+++QDKL+
Subjt:  VADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLVQDKLL

XP_012833844.1 PREDICTED: uncharacterized protein LOC105954710 [Erythranthe guttata]2.7e-1341.41Show/hide
Query:  VADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLVQDKLLLKTIGR
        + DSGAS HI HDK LFI++R      V+ P  +  IV  +GD++L   I L  V Y+P+F +N++SV+A L+++++ + FS  ++++QDK   K IGR
Subjt:  VADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLVQDKLLLKTIGR

XP_012835096.1 PREDICTED: uncharacterized protein LOC105955841, partial [Erythranthe guttata]8.5e-1240.59Show/hide
Query:  VADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLVQDKLLLKTIGRA
        + DSGAS HI HDK LFI++R      V+ P  +  IV  +GD++L   I L  V Y+P+F + ++SV+A L  ++Y++ FS   Y++Q K   K IGR 
Subjt:  VADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLVQDKLLLKTIGRA

Query:  E
        +
Subjt:  E

XP_012857659.1 PREDICTED: uncharacterized protein LOC105976934 [Erythranthe guttata]3.1e-1444.09Show/hide
Query:  VADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLVQDKLL
        + DSGAS HI H+KSLF++M+      VV P  +  +V+ IGD++L   ++LH+V Y+PEF +N++SV+ALL    Y+V F   S+ +QD+L+
Subjt:  VADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLVQDKLL

XP_022856063.1 uncharacterized protein LOC111377235, partial [Olea europaea var. sylvestris]5.9e-1344.44Show/hide
Query:  VADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLVQDKLLLKTIGR
        V DSGA+SHI   KS F SM+L     V  P   R  V  +G +K  N +ML DVLY+P F +N++SV++L+KD   IV F  N   +QD    K IG+
Subjt:  VADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLVQDKLLLKTIGR

TrEMBL top hitse value%identityAlignment
A0A151QLJ3 Uncharacterized protein1.6e-1141.35Show/hide
Query:  KVSH--VADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLVQDKLLL
        K SH  + DSGA+SHI   KSL+ S    H   V+ P  T+  V+ IG +K+ + I LH+VLY+P F +N+LS+  L+ ++ +      NS+L+QD   L
Subjt:  KVSH--VADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLVQDKLLL

Query:  KTIG
        +TIG
Subjt:  KTIG

A0A151TIF3 Retrovirus-related Pol polyprotein from transposon TNT 1-944.1e-1241.12Show/hide
Query:  KVSH--VADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLVQDKLLL
        K SH  + DSGA+SHI   KSL+ S    H   V+ P  T+  V+ IG +K+ + I LH+VLY+P F +N+LS+  L+ ++ +      NS+L+QD   L
Subjt:  KVSH--VADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLVQDKLLL

Query:  KTIGRAE
        +TIG A+
Subjt:  KTIGRAE

A0A151TR37 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-1039.8Show/hide
Query:  VADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLVQDKLLLKTIG
        + DSGA+SHI   K L+ S    H   V  P  T+  V+ IG +K+ + I LH+VLY+P F +N+LS+  L+ ++ +      NS+L+QD   L+TIG
Subjt:  VADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLVQDKLLLKTIG

A0A5J5AMM8 Uncharacterized protein2.1e-1133.06Show/hide
Query:  MLQTHLVD--TKTTGTKPTKVSHVADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKY
        ML THL    + T   + +  +    +GA+ HI  + +LF +MR     +V  P  TR  +   GD+KL + ++L DVLY+P+F +N++SV AL K  ++
Subjt:  MLQTHLVD--TKTTGTKPTKVSHVADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKY

Query:  IVNFSGNSYLVQDKLLLKTIGRAE
         ++F  + +++Q+    KTIG+ +
Subjt:  IVNFSGNSYLVQDKLLLKTIGRAE

A0A6D2JTF8 Integrase catalytic domain-containing protein1.0e-1038.05Show/hide
Query:  KTTGTKPTKVSHVADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLV
        + TG   +  S + DSGA+ H+ HDKSLF  +  A   SV  PT     +  IG +K+   ++L++VLY+P+F  N+LS++ L KD  Y V+F  +S ++
Subjt:  KTTGTKPTKVSHVADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLV

Query:  QDKLLLKTIGRAE
        QD +    IG+ E
Subjt:  QDKLLLKTIGRAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCAGACACATCTGGTTGATACCAAAACCACTGGAACAAAGCCTACTAAAGTCAGTCATGTGGCAGATTCTGGAGCTTCAAGCCACATTTACCATGATAAGTCCCT
GTTTATTAGTATGCGATTAGCCCACAAGGTTTCTGTTGTCTTCCCAACACAAACTCGTTTTATTGTTGATTTGATTGGGGATATGAAGCTAGTGAATGGGATTATGTTGC
ATGATGTCCTTTATCTACCTGAGTTCAATTATAATATACTTTCGGTCAATGCTCTACTTAAAGATGATAAGTACATTGTTAACTTCTCTGGAAATTCTTATTTAGTTCAG
GACAAGTTACTCTTGAAGACGATTGGCAGGGCTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCCAGACACATCTGGTTGATACCAAAACCACTGGAACAAAGCCTACTAAAGTCAGTCATGTGGCAGATTCTGGAGCTTCAAGCCACATTTACCATGATAAGTCCCT
GTTTATTAGTATGCGATTAGCCCACAAGGTTTCTGTTGTCTTCCCAACACAAACTCGTTTTATTGTTGATTTGATTGGGGATATGAAGCTAGTGAATGGGATTATGTTGC
ATGATGTCCTTTATCTACCTGAGTTCAATTATAATATACTTTCGGTCAATGCTCTACTTAAAGATGATAAGTACATTGTTAACTTCTCTGGAAATTCTTATTTAGTTCAG
GACAAGTTACTCTTGAAGACGATTGGCAGGGCTGAATGA
Protein sequenceShow/hide protein sequence
MLQTHLVDTKTTGTKPTKVSHVADSGASSHIYHDKSLFISMRLAHKVSVVFPTQTRFIVDLIGDMKLVNGIMLHDVLYLPEFNYNILSVNALLKDDKYIVNFSGNSYLVQ
DKLLLKTIGRAE