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Lag0026279 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026279
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProliferating cell nuclear antigen
Genome locationchr10:33816926..33820643
RNA-Seq ExpressionLag0026279
SyntenyLag0026279
Gene Ontology termsGO:0006272 - leading strand elongation (biological process)
GO:0006275 - regulation of DNA replication (biological process)
GO:0006298 - mismatch repair (biological process)
GO:0019985 - translesion synthesis (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0043626 - PCNA complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0030337 - DNA polymerase processivity factor activity (molecular function)
InterPro domainsIPR022648 - Proliferating cell nuclear antigen, PCNA, N-terminal
IPR022659 - Proliferating cell nuclear antigen, PCNA, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600018.1 Proliferating cell nuclear antigen, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2082.76Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE
        LLRSEGFEHYRCDRN+SMGMNLNNMAK+LRCAGNDDIV  KA+D SDC+T MFENP +
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE

XP_022942180.1 proliferating cell nuclear antigen-like [Cucurbita moschata]3.0e-2082.76Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE
        LLRSEGFEHYRCDRN+SMGMNLNNMAK+LRCAGNDDIV  KA+D SDC+T MFENP +
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE

XP_022996079.1 proliferating cell nuclear antigen-like [Cucurbita maxima]3.0e-2082.76Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE
        LLRSEGFEHYRCDRN+SMGMNLNNMAK+LRCAGNDDIV  KA+D SDC+T MFENP +
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE

XP_023549127.1 proliferating cell nuclear antigen-like [Cucurbita pepo subsp. pepo]3.0e-2082.76Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE
        LLRSEGFEHYRCDRN+SMGMNLNNMAK+LRCAGNDDIV  KA+D SDC+T MFENP +
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE

XP_038891866.1 proliferating cell nuclear antigen-like [Benincasa hispida]6.6e-2084.48Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE
        LLRSEGFEHYRCDR+ISMGMNLNNMAK+LRCAGNDDIV  KA+D SDCVT MFENP +
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE

TrEMBL top hitse value%identityAlignment
A0A371I2J1 Proliferating cell nuclear antigen1.0e-1881.03Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE
        LLRSEGFEHYRCDRNISMGMNLNNMAK+L+CAGNDDIV  KA+D SD VT MFE+P +
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE

A0A484M1M9 Proliferating cell nuclear antigen1.0e-1879.31Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE
        LLRSEGFEHYRCDRNISMGMNLNNMAK+L+CAGNDDI+  K +D SD VT MFENP +
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE

A0A6J1DUY3 Proliferating cell nuclear antigen3.5e-1979.31Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE
        LLRS+GFEHYRCDRNIS+GMNL NMAK+LRCAGNDDIV  KA+D SDC+T MFENP +
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE

A0A6J1FVS4 Proliferating cell nuclear antigen1.4e-2082.76Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE
        LLRSEGFEHYRCDRN+SMGMNLNNMAK+LRCAGNDDIV  KA+D SDC+T MFENP +
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE

A0A6J1K7Q7 Proliferating cell nuclear antigen1.4e-2082.76Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE
        LLRSEGFEHYRCDRN+SMGMNLNNMAK+LRCAGNDDIV  KA+D SDC+T MFENP +
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE

SwissProt top hitse value%identityAlignment
O82134 Proliferating cell nuclear antigen6.2e-2177.59Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE
        LLRSEGFEHYRCDRN+SMGMNLNNMAK+L+CAGNDDI+  KA+D SD VT MFE+P +
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE

P17070 Proliferating cell nuclear antigen3.7e-2182.14Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENP
        LLRSEGFEHYRCDRN+SMGMNLNNMAK+LRCAGNDDI+  KA+D SD VT MFE+P
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENP

P22177 Proliferating cell nuclear antigen (Fragment)3.7e-2179.31Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE
        LLRSEGFEHYRCDRNISMGMNLNNMAK+L+CAGNDDI+  KA+D SD VT MFE+P +
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE

Q00268 Proliferating cell nuclear antigen1.8e-2077.59Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE
        LLRSEGFEHYRCDRNISMGMNL NMAK+L+CAGNDDI+  KA+D SD VT MFE+P +
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE

Q43266 Proliferating cell nuclear antigen8.1e-2180.36Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENP
        LLR+EGFEHYRCDRN+SMGMNLNNMAK+LRCAGNDDI+  KA+D SD VT MFE+P
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENP

Arabidopsis top hitse value%identityAlignment
AT1G07370.1 proliferating cellular nuclear antigen 11.4e-2072.41Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE
        LLRSEGFEHYRCDRN+SMGMNL NM+K+L+CAGNDDI+  KA+D  D VT MFE+P +
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE

AT2G29570.1 proliferating cell nuclear antigen 24.9e-2174.14Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE
        LLRSEGFEHYRCDRN+SMGMNL NM+K+L+CAGNDDI+  KA+D SD VT MFE+P +
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCE

AT4G14230.1 CBS domain-containing protein with a domain of unknown function (DUF21)1.3e-0876.32Show/hide
Query:  ELFNQYVAIVLFVTFVLAFGEVISQAICTWYGLAVGAN
        ++FN+YVAI+L VTFVL  GEVI QAICT YGLAVGAN
Subjt:  ELFNQYVAIVLFVTFVLAFGEVISQAICTWYGLAVGAN

AT4G14240.1 CBS domain-containing protein with a domain of unknown function (DUF21)6.0e-1184.62Show/hide
Query:  ELFNQYVAIVLFVTFVLAFGEVISQAICTWYGLAVGANF
        +LFN+YVAI+L VTFVLAFGEVI QAICT YGLAVGANF
Subjt:  ELFNQYVAIVLFVTFVLAFGEVISQAICTWYGLAVGANF

AT4G14240.2 CBS domain-containing protein with a domain of unknown function (DUF21)6.0e-1184.62Show/hide
Query:  ELFNQYVAIVLFVTFVLAFGEVISQAICTWYGLAVGANF
        +LFN+YVAI+L VTFVLAFGEVI QAICT YGLAVGANF
Subjt:  ELFNQYVAIVLFVTFVLAFGEVISQAICTWYGLAVGANF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCAGGAGAAGAAGAGAGAATGAGATGGATTATCAAGAAGTCATGTCGCTTTGGTCTCTTTCTTCTCCGCTCTGAGGGTTTTGAGCACTACCGTTGCGACCGCAA
CATCTCCATGGGTATGAACCTCAACAACATGGCTAAGATTCTCCGTTGCGCTGGCAACGATGACATTGTTCTGCCGAAGGCCGAAGATAGTAGCGATTGCGTCACATTAA
TGTTCGAAAACCCTTGTGAGCTTTTTAATCAGTATGTTGCTATAGTTCTTTTTGTGACATTTGTATTGGCTTTTGGAGAAGTTATATCACAAGCAATATGCACTTGGTAT
GGACTTGCTGTAGGTGCTAATTTTGGTGTCTTGTACGATTTTGATGGTTATTTGCTATCCAATTGCTTATCCTATTGGGAAGGAGGGGATGTTGTGGTGAATGGACCAAT
TGCTTGCATCTCAATTGGTTCTGGGGTTACTGGCGTTAGACTTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCAGGAGAAGAAGAGAGAATGAGATGGATTATCAAGAAGTCATGTCGCTTTGGTCTCTTTCTTCTCCGCTCTGAGGGTTTTGAGCACTACCGTTGCGACCGCAA
CATCTCCATGGGTATGAACCTCAACAACATGGCTAAGATTCTCCGTTGCGCTGGCAACGATGACATTGTTCTGCCGAAGGCCGAAGATAGTAGCGATTGCGTCACATTAA
TGTTCGAAAACCCTTGTGAGCTTTTTAATCAGTATGTTGCTATAGTTCTTTTTGTGACATTTGTATTGGCTTTTGGAGAAGTTATATCACAAGCAATATGCACTTGGTAT
GGACTTGCTGTAGGTGCTAATTTTGGTGTCTTGTACGATTTTGATGGTTATTTGCTATCCAATTGCTTATCCTATTGGGAAGGAGGGGATGTTGTGGTGAATGGACCAAT
TGCTTGCATCTCAATTGGTTCTGGGGTTACTGGCGTTAGACTTGCTTAG
Protein sequenceShow/hide protein sequence
MKAGEEERMRWIIKKSCRFGLFLLRSEGFEHYRCDRNISMGMNLNNMAKILRCAGNDDIVLPKAEDSSDCVTLMFENPCELFNQYVAIVLFVTFVLAFGEVISQAICTWY
GLAVGANFGVLYDFDGYLLSNCLSYWEGGDVVVNGPIACISIGSGVTGVRLA