| GenBank top hits | e value | %identity | Alignment |
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| KAA0032606.1 Integrase, catalytic core [Cucumis melo var. makuwa] | 1.2e-20 | 45.8 | Show/hide |
Query: GSSNTTAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQVHVEMEQDQVSGQVLLQGTLHDGLYRFNLSSSSLVEPQDILPVQAFTSQLFV
G S AMV S +LN D+NWYPDS ATNHL ++FNNL G+EYGGGNQ++ D+ +GQ LLQG LH GLYRFN+ S ++ P + V
Subjt: GSSNTTAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQVHVEMEQDQVSGQVLLQGTLHDGLYRFNLSSSSLVEPQDILPVQAFTSQLFV
Query: SPSNVNCSVF------DLWHRHLGHSSLSII
S + + F D+WHR LGH +S++
Subjt: SPSNVNCSVF------DLWHRHLGHSSLSII
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| KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.3e-23 | 28.88 | Show/hide |
Query: EEILHQMIHCTSSKEIW----------------------------------------QYIDALAAVGKPVEVEDHILFILAGKSHESKIASTESSLPSAN
EEIL+QM+HC S+KEIW Q +DALA++ KPV +DHIL+ILAG + S S+ S
Subjt: EEILHQMIHCTSSKEIW----------------------------------------QYIDALAAVGKPVEVEDHILFILAGKSHESKIASTESSLPSAN
Query: LTVHSKPPESNCKSLLLIIFLLILVVVTEEEAV-VVEVLTQTVE--------VVPGTIETDHIVNS-------------------------VEIQPYSSQ
P SLLL + E A+ V ++TQT E +H N ++ + +
Subjt: LTVHSKPPESNCKSLLLIIFLLILVVVTEEEAV-VVEVLTQTVE--------VVPGTIETDHIVNS-------------------------VEIQPYSSQ
Query: CFFRYAPSGSSN-------------------TTAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQV------------------------
CFFRY P +S+ +AMV + DLN D+NWYPDSGATNHLTHS +NLS+G+EYGGGNQ+
Subjt: CFFRYAPSGSSN-------------------TTAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQV------------------------
Query: -----------------------------HVEME--------QDQVSGQVLLQGTLHDGLYRFNLSSSSLVEPQDILPVQAFTSQLF--VSPSNVNCSVF
HV E +D +GQVLLQG L+DGLY+F + S + + + T +F V P + N +
Subjt: -----------------------------HVEME--------QDQVSGQVLLQGTLHDGLYRFNLSSSSLVEPQDILPVQAFTSQLF--VSPSNVNCSVF
Query: DLWHRHLGHSSLSIIKSVI
DLWHR LGH L I+K+V+
Subjt: DLWHRHLGHSSLSIIKSVI
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| KAA0059137.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 5.4e-18 | 34.52 | Show/hide |
Query: CFFRYAPSGSSN-------------------TTAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQVH-----------------------
C+FRY P S++ +AMVT DLN ++NWYPDSGA+NHLTHS +NLS G+EYG G+Q++
Subjt: CFFRYAPSGSSN-------------------TTAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQVH-----------------------
Query: --------------VEMEQDQVSGQVLLQGTLHDGLYRFNLSSS---SLVEPQDILPVQAFTSQLFVSPSNVNCSVFDLWHRHLGHSSLSIIKSVIQ
+ DQ +GQ+LLQ L DGLY+FNL SS S+ +I P A T+ L S + + D+WHR LGH L+++++ ++
Subjt: --------------VEMEQDQVSGQVLLQGTLHDGLYRFNLSSS---SLVEPQDILPVQAFTSQLFVSPSNVNCSVFDLWHRHLGHSSLSIIKSVIQ
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| KAA0067212.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 1.2e-20 | 42.21 | Show/hide |
Query: TAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQVHV-----------------------------EMEQDQVSGQVLLQGTLHDGLYRFN
+AMV +PDLN D+NWYPDSGATNHLTHS +NLS G+EYGGGNQ++ + D +GQVLLQG L+DGLY+F
Subjt: TAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQVHV-----------------------------EMEQDQVSGQVLLQGTLHDGLYRFN
Query: LS-SSSLVEPQDILPVQAFTSQLFVSPSNVNCSVFDLWHRHLGHSSLSIIKSVI
+ S + D F + V P + N + DLWHR LGH L +K+V+
Subjt: LS-SSSLVEPQDILPVQAFTSQLFVSPSNVNCSVFDLWHRHLGHSSLSIIKSVI
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| TYK10642.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.3e-23 | 28.88 | Show/hide |
Query: EEILHQMIHCTSSKEIW----------------------------------------QYIDALAAVGKPVEVEDHILFILAGKSHESKIASTESSLPSAN
EEIL+QM+HC S+KEIW Q +DALA++ KPV +DHIL+ILAG + S S+ S
Subjt: EEILHQMIHCTSSKEIW----------------------------------------QYIDALAAVGKPVEVEDHILFILAGKSHESKIASTESSLPSAN
Query: LTVHSKPPESNCKSLLLIIFLLILVVVTEEEAV-VVEVLTQTVE--------VVPGTIETDHIVNS-------------------------VEIQPYSSQ
P SLLL + E A+ V ++TQT E +H N ++ + +
Subjt: LTVHSKPPESNCKSLLLIIFLLILVVVTEEEAV-VVEVLTQTVE--------VVPGTIETDHIVNS-------------------------VEIQPYSSQ
Query: CFFRYAPSGSSN-------------------TTAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQV------------------------
CFFRY P +S+ +AMV + DLN D+NWYPDSGATNHLTHS +NLS+G+EYGGGNQ+
Subjt: CFFRYAPSGSSN-------------------TTAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQV------------------------
Query: -----------------------------HVEME--------QDQVSGQVLLQGTLHDGLYRFNLSSSSLVEPQDILPVQAFTSQLF--VSPSNVNCSVF
HV E +D +GQVLLQG L+DGLY+F + S + + + T +F V P + N +
Subjt: -----------------------------HVEME--------QDQVSGQVLLQGTLHDGLYRFNLSSSSLVEPQDILPVQAFTSQLF--VSPSNVNCSVF
Query: DLWHRHLGHSSLSIIKSVI
DLWHR LGH L I+K+V+
Subjt: DLWHRHLGHSSLSIIKSVI
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.5e-23 | 28.88 | Show/hide |
Query: EEILHQMIHCTSSKEIW----------------------------------------QYIDALAAVGKPVEVEDHILFILAGKSHESKIASTESSLPSAN
EEIL+QM+HC S+KEIW Q +DALA++ KPV +DHIL+ILAG + S S+ S
Subjt: EEILHQMIHCTSSKEIW----------------------------------------QYIDALAAVGKPVEVEDHILFILAGKSHESKIASTESSLPSAN
Query: LTVHSKPPESNCKSLLLIIFLLILVVVTEEEAV-VVEVLTQTVE--------VVPGTIETDHIVNS-------------------------VEIQPYSSQ
P SLLL + E A+ V ++TQT E +H N ++ + +
Subjt: LTVHSKPPESNCKSLLLIIFLLILVVVTEEEAV-VVEVLTQTVE--------VVPGTIETDHIVNS-------------------------VEIQPYSSQ
Query: CFFRYAPSGSSN-------------------TTAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQV------------------------
CFFRY P +S+ +AMV + DLN D+NWYPDSGATNHLTHS +NLS+G+EYGGGNQ+
Subjt: CFFRYAPSGSSN-------------------TTAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQV------------------------
Query: -----------------------------HVEME--------QDQVSGQVLLQGTLHDGLYRFNLSSSSLVEPQDILPVQAFTSQLF--VSPSNVNCSVF
HV E +D +GQVLLQG L+DGLY+F + S + + + T +F V P + N +
Subjt: -----------------------------HVEME--------QDQVSGQVLLQGTLHDGLYRFNLSSSSLVEPQDILPVQAFTSQLF--VSPSNVNCSVF
Query: DLWHRHLGHSSLSIIKSVI
DLWHR LGH L I+K+V+
Subjt: DLWHRHLGHSSLSIIKSVI
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| A0A5A7VFQ6 Retrotransposon protein, putative, Ty1-copia subclass | 5.7e-21 | 42.21 | Show/hide |
Query: TAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQVHV-----------------------------EMEQDQVSGQVLLQGTLHDGLYRFN
+AMV +PDLN D+NWYPDSGATNHLTHS +NLS G+EYGGGNQ++ + D +GQVLLQG L+DGLY+F
Subjt: TAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQVHV-----------------------------EMEQDQVSGQVLLQGTLHDGLYRFN
Query: LS-SSSLVEPQDILPVQAFTSQLFVSPSNVNCSVFDLWHRHLGHSSLSIIKSVI
+ S + D F + V P + N + DLWHR LGH L +K+V+
Subjt: LS-SSSLVEPQDILPVQAFTSQLFVSPSNVNCSVFDLWHRHLGHSSLSIIKSVI
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| A0A5D3CH97 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.5e-23 | 28.88 | Show/hide |
Query: EEILHQMIHCTSSKEIW----------------------------------------QYIDALAAVGKPVEVEDHILFILAGKSHESKIASTESSLPSAN
EEIL+QM+HC S+KEIW Q +DALA++ KPV +DHIL+ILAG + S S+ S
Subjt: EEILHQMIHCTSSKEIW----------------------------------------QYIDALAAVGKPVEVEDHILFILAGKSHESKIASTESSLPSAN
Query: LTVHSKPPESNCKSLLLIIFLLILVVVTEEEAV-VVEVLTQTVE--------VVPGTIETDHIVNS-------------------------VEIQPYSSQ
P SLLL + E A+ V ++TQT E +H N ++ + +
Subjt: LTVHSKPPESNCKSLLLIIFLLILVVVTEEEAV-VVEVLTQTVE--------VVPGTIETDHIVNS-------------------------VEIQPYSSQ
Query: CFFRYAPSGSSN-------------------TTAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQV------------------------
CFFRY P +S+ +AMV + DLN D+NWYPDSGATNHLTHS +NLS+G+EYGGGNQ+
Subjt: CFFRYAPSGSSN-------------------TTAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQV------------------------
Query: -----------------------------HVEME--------QDQVSGQVLLQGTLHDGLYRFNLSSSSLVEPQDILPVQAFTSQLF--VSPSNVNCSVF
HV E +D +GQVLLQG L+DGLY+F + S + + + T +F V P + N +
Subjt: -----------------------------HVEME--------QDQVSGQVLLQGTLHDGLYRFNLSSSSLVEPQDILPVQAFTSQLF--VSPSNVNCSVF
Query: DLWHRHLGHSSLSIIKSVI
DLWHR LGH L I+K+V+
Subjt: DLWHRHLGHSSLSIIKSVI
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| A0A5D3DC66 Integrase, catalytic core | 5.7e-21 | 45.8 | Show/hide |
Query: GSSNTTAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQVHVEMEQDQVSGQVLLQGTLHDGLYRFNLSSSSLVEPQDILPVQAFTSQLFV
G S AMV S +LN D+NWYPDS ATNHL ++FNNL G+EYGGGNQ++ D+ +GQ LLQG LH GLYRFN+ S ++ P + V
Subjt: GSSNTTAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQVHVEMEQDQVSGQVLLQGTLHDGLYRFNLSSSSLVEPQDILPVQAFTSQLFV
Query: SPSNVNCSVF------DLWHRHLGHSSLSII
S + + F D+WHR LGH +S++
Subjt: SPSNVNCSVF------DLWHRHLGHSSLSII
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| A0A5D3DDT9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.6e-18 | 34.52 | Show/hide |
Query: CFFRYAPSGSSN-------------------TTAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQVH-----------------------
C+FRY P S++ +AMVT DLN ++NWYPDSGA+NHLTHS +NLS G+EYG G+Q++
Subjt: CFFRYAPSGSSN-------------------TTAMVTSPDLNQDTNWYPDSGATNHLTHSFNNLSVGTEYGGGNQVH-----------------------
Query: --------------VEMEQDQVSGQVLLQGTLHDGLYRFNLSSS---SLVEPQDILPVQAFTSQLFVSPSNVNCSVFDLWHRHLGHSSLSIIKSVIQ
+ DQ +GQ+LLQ L DGLY+FNL SS S+ +I P A T+ L S + + D+WHR LGH L+++++ ++
Subjt: --------------VEMEQDQVSGQVLLQGTLHDGLYRFNLSSS---SLVEPQDILPVQAFTSQLFVSPSNVNCSVFDLWHRHLGHSSLSIIKSVIQ
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