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Lag0026291 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026291
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:34017202..34017930
RNA-Seq ExpressionLag0026291
SyntenyLag0026291
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4349800.1 hypothetical protein F8388_001078 [Cannabis sativa]5.7e-1340.48Show/hide
Query:  MIARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKECLN
        M+A  +GN +GEFLE+  +  N  WG  +RI+V+L +++PL RG M++   +    WI  RYE++P FCF C R+ H  ++C++
Subjt:  MIARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKECLN

MCH84359.1 zinc CCHC-type-like protein [Trifolium medium]4.4e-1336.57Show/hide
Query:  IARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKECLNKKDVEEGKKNSHEFERT
        +A+K+GNNLG F EMD ++ N   G  +RI+  LD+ +PL+RG  L+ +G +   W+  +YE++PNFCF C RI H  K+C   ++VE+  ++++  +R 
Subjt:  IARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKECLNKKDVEEGKKNSHEFERT

Query:  KEALDVGLNQESPVTKEMENRERSRNEKDGEEDI
          AL++      P T   +N   S   K+ EE++
Subjt:  KEALDVGLNQESPVTKEMENRERSRNEKDGEEDI

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]8.9e-1440.74Show/hide
Query:  IARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKEC
        +A ++GN +G F+++D  +   SWG+++RI+V +DI++PL+RG  +   G  G CWI I+YE++P+FC+ C  I H + +C
Subjt:  IARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKEC

XP_030505014.1 uncharacterized protein LOC115719985 [Cannabis sativa]4.4e-1342.17Show/hide
Query:  MIARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKECL
        ++A  +GN +GEFL++ +E L+  WG  +RI+VRL I +PL RG M+    ++ + WI  RYE++P FCF C R+ H  ++C+
Subjt:  MIARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKECL

XP_042952131.1 uncharacterized protein LOC122289219 [Carya illinoinensis]4.4e-1344.44Show/hide
Query:  IARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKEC
        + R IGN +G   E+D+E+  ++WG  +RI+VR+DIS+PL RG  ++  G  G CWI   YE++PNFC+ C ++ H  K+C
Subjt:  IARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKEC

TrEMBL top hitse value%identityAlignment
A0A392MB81 Zinc CCHC-type-like protein (Fragment)2.1e-1336.57Show/hide
Query:  IARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKECLNKKDVEEGKKNSHEFERT
        +A+K+GNNLG F EMD ++ N   G  +RI+  LD+ +PL+RG  L+ +G +   W+  +YE++PNFCF C RI H  K+C   ++VE+  ++++  +R 
Subjt:  IARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKECLNKKDVEEGKKNSHEFERT

Query:  KEALDVGLNQESPVTKEMENRERSRNEKDGEEDI
          AL++      P T   +N   S   K+ EE++
Subjt:  KEALDVGLNQESPVTKEMENRERSRNEKDGEEDI

A0A6J1DU55 uncharacterized protein LOC1110231354.3e-1440.74Show/hide
Query:  IARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKEC
        +A ++GN +G F+++D  +   SWG+++RI+V +DI++PL+RG  +   G  G CWI I+YE++P+FC+ C  I H + +C
Subjt:  IARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKEC

A0A803PIB6 Uncharacterized protein1.6e-1341.98Show/hide
Query:  IARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKEC
        +AR +GN LGEF+ + ++ LN  WGS +R +VRLDI++PL RG M+    ++   W+  RYE++P +C  C  I H+ ++C
Subjt:  IARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKEC

A0A803PZC2 Uncharacterized protein2.1e-1342.17Show/hide
Query:  MIARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKECL
        ++A  +GN +GEFL++ +E L+  WG  +RI+VRL I +PL RG M+    ++ + WI  RYE++P FCF C R+ H  ++C+
Subjt:  MIARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKECL

A0A803QBH3 Uncharacterized protein2.1e-1342.17Show/hide
Query:  MIARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKECL
        ++A  +GN +GEFL++ +E L+  WG  +RI+VRL I +PL RG M+    ++ + WI  RYE++P FCF C R+ H  ++C+
Subjt:  MIARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKECL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G36228.1 nucleic acid binding;zinc ion binding1.6e-0533.77Show/hide
Query:  IGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKEC
        I + LGE + MD  +  +S  + IR+KVR+D + PL+    +R    E    I   YEK+   C  C R++H    C
Subjt:  IGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGCAAGGAAGATCGGCAACAATCTTGGGGAATTCCTCGAAATGGATAAAGAAAAGCTAAACTCTTCATGGGGCAGCAACATTAGAATTAAGGTCAGATTAGATAT
ATCTAGACCTTTACAAAGAGGTTTTATGCTCAGAACAAAGGGACTCGAAGGAAATTGTTGGATTACAATTAGATACGAAAAGATGCCAAACTTTTGTTTTCTATGTAGAA
GGATTAGTCATATGGCCAAGGAATGCTTAAACAAGAAGGATGTTGAGGAAGGGAAAAAAAATAGTCATGAATTTGAAAGAACTAAGGAAGCTCTAGATGTGGGTCTGAAT
CAAGAAAGCCCTGTAACCAAGGAGATGGAAAACAGAGAGAGATCCAGAAATGAGAAAGATGGAGAGGAAGATATTATTAGACGAATGGAACAGGATGATGAAGCTGGAGA
TTGGGAAGCGCTACATATGAGCTTGGACGACGTAAGGCCTGAAATCCATAAGAGTACATCTCCTGGAAAAAAAACATTGACCAAGCTAGTATGGGATGGGAACTCCCAAA
AAGGAAAGAATGAGTTGGAAAAGAAGACAGAGAACAGGGCAACCAGAGGATTATCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTGCAAGGAAGATCGGCAACAATCTTGGGGAATTCCTCGAAATGGATAAAGAAAAGCTAAACTCTTCATGGGGCAGCAACATTAGAATTAAGGTCAGATTAGATAT
ATCTAGACCTTTACAAAGAGGTTTTATGCTCAGAACAAAGGGACTCGAAGGAAATTGTTGGATTACAATTAGATACGAAAAGATGCCAAACTTTTGTTTTCTATGTAGAA
GGATTAGTCATATGGCCAAGGAATGCTTAAACAAGAAGGATGTTGAGGAAGGGAAAAAAAATAGTCATGAATTTGAAAGAACTAAGGAAGCTCTAGATGTGGGTCTGAAT
CAAGAAAGCCCTGTAACCAAGGAGATGGAAAACAGAGAGAGATCCAGAAATGAGAAAGATGGAGAGGAAGATATTATTAGACGAATGGAACAGGATGATGAAGCTGGAGA
TTGGGAAGCGCTACATATGAGCTTGGACGACGTAAGGCCTGAAATCCATAAGAGTACATCTCCTGGAAAAAAAACATTGACCAAGCTAGTATGGGATGGGAACTCCCAAA
AAGGAAAGAATGAGTTGGAAAAGAAGACAGAGAACAGGGCAACCAGAGGATTATCCTAG
Protein sequenceShow/hide protein sequence
MIARKIGNNLGEFLEMDKEKLNSSWGSNIRIKVRLDISRPLQRGFMLRTKGLEGNCWITIRYEKMPNFCFLCRRISHMAKECLNKKDVEEGKKNSHEFERTKEALDVGLN
QESPVTKEMENRERSRNEKDGEEDIIRRMEQDDEAGDWEALHMSLDDVRPEIHKSTSPGKKTLTKLVWDGNSQKGKNELEKKTENRATRGLS