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Lag0026317 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026317
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr10:34540476..34541890
RNA-Seq ExpressionLag0026317
SyntenyLag0026317
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsIPR018289 - MULE transposase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
VVA36347.1 PREDICTED: transposon [Prunus dulcis]3.8e-1762.67Show/hide
Query:  LKGLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQKEVE
        L G+DACHLKG+ QG L+ AVGID ND I PIA+ V E E KDSW WFL LL +DLG     G+TFISDQQK ++
Subjt:  LKGLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQKEVE

XP_023899059.1 uncharacterized protein LOC112010914 [Quercus suber]2.3e-1761.43Show/hide
Query:  GLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQK
        G+D CHLKG   G ++TAVG DGN+G+ PIA+ VVEAE KDSWTWF+  L DD+G+   +G+TF+SDQQK
Subjt:  GLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQK

XP_030922963.1 uncharacterized protein LOC115949829 [Quercus lobata]2.3e-1761.43Show/hide
Query:  GLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQK
        G+D CHLKG   G ++TAVG DGN+G+ PIA+ VVEAE KDSWTWF+  L DD+G+   +G+TF+SDQQK
Subjt:  GLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQK

XP_034229423.1 uncharacterized protein LOC117638399 [Prunus dulcis]3.8e-1762.67Show/hide
Query:  LKGLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQKEVE
        L G+DACHLKG+ QG L+ AVGID ND I PIA+ V E E KDSW WFL LL +DLG     G+TFISDQQK ++
Subjt:  LKGLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQKEVE

XP_040372479.1 uncharacterized protein LOC112192744 [Rosa chinensis]1.8e-1965.75Show/hide
Query:  GLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQKEVE
        GLD CHLKG  +GHL+TAVGIDGN+GI PIAW +VE+E +DSWTWFL LL+ DL  +HS  + FISD+QK +E
Subjt:  GLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQKEVE

TrEMBL top hitse value%identityAlignment
A0A251PFQ5 ZnF_PMZ domain-containing protein9.2e-1760Show/hide
Query:  LKGLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQKEVE
        L G+DACHLKG+ QG L+ +VGID ND + PIA+ V E E KDSW WFL LL +DLG     G+TFISDQQK ++
Subjt:  LKGLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQKEVE

A0A5E4G990 PREDICTED: transposon1.9e-1762.67Show/hide
Query:  LKGLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQKEVE
        L G+DACHLKG+ QG L+ AVGID ND I PIA+ V E E KDSW WFL LL +DLG     G+TFISDQQK ++
Subjt:  LKGLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQKEVE

A0A6S7MXI8 MULE domain-containing protein1.2e-1652.13Show/hide
Query:  CKLRLKGLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQKEVETEAATEGMTLEDGRQ
        CK R+ GLD C LKG C+G L+TA+G DGN+ + PIAWVVV+ E KD+W WF++LL  DLG    +G T ISDQ K +  E   E + L + RQ
Subjt:  CKLRLKGLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQKEVETEAATEGMTLEDGRQ

M5W642 Uncharacterized protein (Fragment)1.2e-1660Show/hide
Query:  LKGLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQKEVE
        L G+D CHLKG+ QG L+ AVGID ND + PIA+ V E E KDSW WFL LL +DLG     G+TFISDQQK ++
Subjt:  LKGLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQKEVE

M5X0G1 ZnF_PMZ domain-containing protein (Fragment)9.2e-1760Show/hide
Query:  LKGLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQKEVE
        L G+DACHLKG+ QG L+ +VGID ND + PIA+ V E E KDSW WFL LL +DLG     G+TFISDQQK ++
Subjt:  LKGLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHSKGFTFISDQQKEVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCTTGAACGCATTTCAAATGAATTGATTGAATGGTATCCTACCTCTAGTGATGTTTATGACGATTTTGAGGGGGTGAAGAGTCAGATGATAGTGATGAGAGACCA
ACTTCACCTATTCCAGAATTGGATGTGCAAGTTGAGATTGAAGGGACTAGATGCATGCCACTTAAAAGGGTCATGCCAAGGGCATTTGATGACTGCAGTTGGAATAGATG
GTAATGATGGCATAGATCCTATTGCATGGGTTGTGGTGGAGGCGGAGATGAAAGATAGTTGGACATGGTTTCTTTCCCTCCTTCAAGATGATCTAGGCAATTTTCACTCT
AAAGGATTTACTTTCATCTCAGACCAACAAAAGGAGGTTGAAACTGAAGCTGCTACTGAGGGAATGACGCTTGAAGATGGTAGACAAAACAATGAAGGTGAAGCACAGAG
GGACGAAAGAAATGTTGGAACCCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCTTGAACGCATTTCAAATGAATTGATTGAATGGTATCCTACCTCTAGTGATGTTTATGACGATTTTGAGGGGGTGAAGAGTCAGATGATAGTGATGAGAGACCA
ACTTCACCTATTCCAGAATTGGATGTGCAAGTTGAGATTGAAGGGACTAGATGCATGCCACTTAAAAGGGTCATGCCAAGGGCATTTGATGACTGCAGTTGGAATAGATG
GTAATGATGGCATAGATCCTATTGCATGGGTTGTGGTGGAGGCGGAGATGAAAGATAGTTGGACATGGTTTCTTTCCCTCCTTCAAGATGATCTAGGCAATTTTCACTCT
AAAGGATTTACTTTCATCTCAGACCAACAAAAGGAGGTTGAAACTGAAGCTGCTACTGAGGGAATGACGCTTGAAGATGGTAGACAAAACAATGAAGGTGAAGCACAGAG
GGACGAAAGAAATGTTGGAACCCAATGA
Protein sequenceShow/hide protein sequence
MSLERISNELIEWYPTSSDVYDDFEGVKSQMIVMRDQLHLFQNWMCKLRLKGLDACHLKGSCQGHLMTAVGIDGNDGIDPIAWVVVEAEMKDSWTWFLSLLQDDLGNFHS
KGFTFISDQQKEVETEAATEGMTLEDGRQNNEGEAQRDERNVGTQ