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Lag0026332 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026332
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr10:34981301..34982891
RNA-Seq ExpressionLag0026332
SyntenyLag0026332
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD6257659.1 unnamed protein product [Miscanthus lutarioriparius]1.1e-1131.72Show/hide
Query:  KVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRAN-WCPVLYERLPDFCFRC--LGHPKRDCVKALGG
        +V  +P+    R  AR +   +G   E++    D  AG   R++VR+ I +PLC G +     ++ + WCP+ YE  PDFC+ C  +GH  R C+K LG 
Subjt:  KVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRAN-WCPVLYERLPDFCFRC--LGHPKRDCVKALGG

Query:  GVLGDANRR-----------GLGGGKLACEGGGTEWTRGVDKRSD
        G     +R            G GG     +G    W+ G   RSD
Subjt:  GVLGDANRR-----------GLGGGKLACEGGGTEWTRGVDKRSD

KAF5464529.1 hypothetical protein F2P56_014601 [Juglans regia]1.8e-1137.37Show/hide
Query:  KVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRANWCPVLYERLPDFCFR--CLGHPKRDCVKALGG
        ++H++P+  +T  + R L S++G VEE++    D   G   R+RV L +D+PL  G           W    YERLP FC+R  CLGH +R+CV ++ G
Subjt:  KVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRANWCPVLYERLPDFCFR--CLGHPKRDCVKALGG

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]2.0e-1845.16Show/hide
Query:  KVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRANWCPVLYERLPDFCFRC--LGHPKRDC
        ++HNIP E  + +MA  L +++G VEEI G   D WAGP  R+RV++ + +PL  G  LK+   +  WCP+ YE+LPDFC+ C  +GH  R+C
Subjt:  KVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRANWCPVLYERLPDFCFRC--LGHPKRDC

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]6.6e-1437.29Show/hide
Query:  VLTPLTT------VVIELCVVG-KVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRANWCPVLYERLP
        +L P T       + I LC    ++H I  E  T+ MA+FL +R+G VEE++G    +W  P   +RV++ + +PL  G  +K    +  WCP+ YERLP
Subjt:  VLTPLTT------VVIELCVVG-KVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRANWCPVLYERLP

Query:  DFCF--RCLGHPKRDCVK
        DFC+   C+GH  R+  K
Subjt:  DFCF--RCLGHPKRDCVK

XP_023888396.1 uncharacterized protein LOC112000488 [Quercus suber]2.8e-1237.63Show/hide
Query:  KVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRANWCPVLYERLPDFCFRC--LGHPKRDC
        ++HN+P+ + TR+ A  + + +GIVE+++ S   E  G   R+RV + ID+PLC G  +     +  W    YERLP FC+ C  L H ++DC
Subjt:  KVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRANWCPVLYERLPDFCFRC--LGHPKRDC

TrEMBL top hitse value%identityAlignment
A0A2N9FNT0 RNase H domain-containing protein6.0e-1337.63Show/hide
Query:  KVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRANWCPVLYERLPDFCF--RCLGHPKRDC
        ++HN+P+ ++T + A  +   IG+VE++  SE +       R+R+RL I+RPLC G ++K +     W    YERLP+FC+   CL H ++DC
Subjt:  KVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRANWCPVLYERLPDFCF--RCLGHPKRDC

A0A2N9GQK5 CCHC-type domain-containing protein2.1e-1333.08Show/hide
Query:  KSLVLTEEEADAVRPEAVLTPLTTVVIELCVVGKVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRAN
        K LV+ E  +DA+  + +L    +  I+      +HN+P+ + T   A  +   +G VE + G + D       R+RVRL +  PLC G ++K ++ + +
Subjt:  KSLVLTEEEADAVRPEAVLTPLTTVVIELCVVGKVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRAN

Query:  WCPVLYERLPDFCFR--CLGHPKRDCVKAL
        W    YERLP+FC+R  CL H ++DC + L
Subjt:  WCPVLYERLPDFCFR--CLGHPKRDCVKAL

A0A2N9HYS7 Uncharacterized protein6.0e-1337.63Show/hide
Query:  KVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRANWCPVLYERLPDFCF--RCLGHPKRDC
        ++HN+P+ ++T + A  +   IG+VE++  SE +       R+R+RL I+RPLC G ++K +     W    YERLP+FC+   CL H ++DC
Subjt:  KVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRANWCPVLYERLPDFCF--RCLGHPKRDC

A0A6J1D765 uncharacterized protein LOC1110179029.6e-1945.16Show/hide
Query:  KVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRANWCPVLYERLPDFCFRC--LGHPKRDC
        ++HNIP E  + +MA  L +++G VEEI G   D WAGP  R+RV++ + +PL  G  LK+   +  WCP+ YE+LPDFC+ C  +GH  R+C
Subjt:  KVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRANWCPVLYERLPDFCFRC--LGHPKRDC

A0A6J1DVS4 uncharacterized protein LOC1110235553.2e-1437.29Show/hide
Query:  VLTPLTT------VVIELCVVG-KVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRANWCPVLYERLP
        +L P T       + I LC    ++H I  E  T+ MA+FL +R+G VEE++G    +W  P   +RV++ + +PL  G  +K    +  WCP+ YERLP
Subjt:  VLTPLTT------VVIELCVVG-KVHNIPMEKQTRQMARFLRSRIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRANWCPVLYERLP

Query:  DFCF--RCLGHPKRDCVK
        DFC+   C+GH  R+  K
Subjt:  DFCF--RCLGHPKRDCVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTTCCGGTGGGTCGTAGTTCTCCGACGAGCGAGTGACAACGACAAGCAAGGTTTGGGGCCGTCAAAGGAGAGGCGGTGGCAAACGATCAGAGTGTTGAGGTTTTG
GGTTTTAAAGCGGTCTGTGAGACATTGGGGCAATAATTTTCGAGCAGGGATCACCGTCTGTCGAGGAGAAGACGACGGCGGACGGTCGGCGAGCAGGTGCCCTGTTTCAT
CGGCGAGAGTGAGACGACGGTGGGTTTCTTGTTTTATTCGGGCATCCGACGGTAGAGTGTGGTGTTTTCTTCTGAGGCTGTCGGTGTCCTTGAGTTTTCTCCGTCGAGGC
AGAGGTAGAGGGCAACGGTGCTTCTTTTCTCTAGAGTTGGGTATTGCGCAGGTGGAAACTGTGGATAGGTGGACAGCGACGGGTGTTTGTTTCTTTTCGAAGTTTTCTTG
TGCAGCAGTCGCTGATCGGTGGTCTAAGGGTATTTCGATGGATGAACTAGTGAGGCGTTGGAAGAGTTTGGTGCTCACAGAGGAGGAGGCTGACGCGGTGAGGCCTGAAG
CGGTGCTAACACCATTGACTACGGTAGTTATTGAGTTGTGTGTTGTGGGTAAGGTCCACAACATTCCGATGGAAAAGCAGACAAGGCAAATGGCTCGGTTTCTTAGGAGT
AGGATTGGGATAGTTGAGGAGATTAACGGGTCTGAGTGTGACGAGTGGGCAGGACCAGTTTTTCGGATACGGGTGCGTTTGCGCATTGATCGTCCGTTATGTGGGGGTTT
CATATTGAAGGATGATAGTGATAGAGCTAACTGGTGTCCAGTATTATATGAGCGTCTACCAGATTTTTGTTTTAGGTGCTTGGGGCACCCTAAAAGGGACTGTGTGAAGG
CTCTGGGTGGGGGTGTGTTGGGAGACGCCAATCGTCGTGGTTTGGGGGGGGGGAAGTTGGCCTGTGAAGGAGGGGGAACGGAGTGGACAAGAGGAGTGGACAAGAGGAGT
GATAGCAAGCATAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGTTCCGGTGGGTCGTAGTTCTCCGACGAGCGAGTGACAACGACAAGCAAGGTTTGGGGCCGTCAAAGGAGAGGCGGTGGCAAACGATCAGAGTGTTGAGGTTTTG
GGTTTTAAAGCGGTCTGTGAGACATTGGGGCAATAATTTTCGAGCAGGGATCACCGTCTGTCGAGGAGAAGACGACGGCGGACGGTCGGCGAGCAGGTGCCCTGTTTCAT
CGGCGAGAGTGAGACGACGGTGGGTTTCTTGTTTTATTCGGGCATCCGACGGTAGAGTGTGGTGTTTTCTTCTGAGGCTGTCGGTGTCCTTGAGTTTTCTCCGTCGAGGC
AGAGGTAGAGGGCAACGGTGCTTCTTTTCTCTAGAGTTGGGTATTGCGCAGGTGGAAACTGTGGATAGGTGGACAGCGACGGGTGTTTGTTTCTTTTCGAAGTTTTCTTG
TGCAGCAGTCGCTGATCGGTGGTCTAAGGGTATTTCGATGGATGAACTAGTGAGGCGTTGGAAGAGTTTGGTGCTCACAGAGGAGGAGGCTGACGCGGTGAGGCCTGAAG
CGGTGCTAACACCATTGACTACGGTAGTTATTGAGTTGTGTGTTGTGGGTAAGGTCCACAACATTCCGATGGAAAAGCAGACAAGGCAAATGGCTCGGTTTCTTAGGAGT
AGGATTGGGATAGTTGAGGAGATTAACGGGTCTGAGTGTGACGAGTGGGCAGGACCAGTTTTTCGGATACGGGTGCGTTTGCGCATTGATCGTCCGTTATGTGGGGGTTT
CATATTGAAGGATGATAGTGATAGAGCTAACTGGTGTCCAGTATTATATGAGCGTCTACCAGATTTTTGTTTTAGGTGCTTGGGGCACCCTAAAAGGGACTGTGTGAAGG
CTCTGGGTGGGGGTGTGTTGGGAGACGCCAATCGTCGTGGTTTGGGGGGGGGGAAGTTGGCCTGTGAAGGAGGGGGAACGGAGTGGACAAGAGGAGTGGACAAGAGGAGT
GATAGCAAGCATAGCTAG
Protein sequenceShow/hide protein sequence
MWFRWVVVLRRASDNDKQGLGPSKERRWQTIRVLRFWVLKRSVRHWGNNFRAGITVCRGEDDGGRSASRCPVSSARVRRRWVSCFIRASDGRVWCFLLRLSVSLSFLRRG
RGRGQRCFFSLELGIAQVETVDRWTATGVCFFSKFSCAAVADRWSKGISMDELVRRWKSLVLTEEEADAVRPEAVLTPLTTVVIELCVVGKVHNIPMEKQTRQMARFLRS
RIGIVEEINGSECDEWAGPVFRIRVRLRIDRPLCGGFILKDDSDRANWCPVLYERLPDFCFRCLGHPKRDCVKALGGGVLGDANRRGLGGGKLACEGGGTEWTRGVDKRS
DSKHS