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Lag0026335 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026335
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr10:35038448..35039014
RNA-Seq ExpressionLag0026335
SyntenyLag0026335
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS33695.1 hypothetical protein Acr_00g0030110 [Actinidia rufa]1.8e-0641.57Show/hide
Query:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSMGNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQFS
        LG +YNPFVTSIQ++   PS+  VH+LL++Y+ARLE+Q++ + L+ +Q N ANL+                  P  K P T+ FPN  S
Subjt:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSMGNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQFS

XP_022148871.1 uncharacterized protein LOC111017438 [Momordica charantia]1.4e-0847.31Show/hide
Query:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSM----GNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQFS
        LGIEYN FVTSIQNR +  +L +V  LL+AY+ RLEKQ SV+ LN+VQ N ANL +    G+   H   S ++ +P      P     PNQ S
Subjt:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSM----GNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQFS

XP_022155181.1 uncharacterized protein LOC111022315 [Momordica charantia]2.8e-1243.64Show/hide
Query:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSMGNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQFSSNFFGS-----
        LG EYN FVTSI NR + PSL +V +LL+AYEARL+KQ +V+ LN+ Q N  NLS+ +N+K               +PPP   FPN +  +F  S     
Subjt:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSMGNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQFSSNFFGS-----

Query:  ---IVLGRPQ
            +LG+PQ
Subjt:  ---IVLGRPQ

XP_038887133.1 uncharacterized protein LOC120077323 [Benincasa hispida]2.6e-1048.31Show/hide
Query:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSMGNNAKHFQMSPNTSKPAPTSKPPP---TSIFPN
        LG EYNPFV+SI NR N PS+A+V NLLI Y++RLEKQT+ ++L L+Q N A+LS+ +  +H Q   +      +S P      SI PN
Subjt:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSMGNNAKHFQMSPNTSKPAPTSKPPP---TSIFPN

XP_038891713.1 uncharacterized protein LOC120081111 [Benincasa hispida]3.8e-0938.98Show/hide
Query:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSMGNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQFSSNFFGSIVLGR
        LG EYN FVTSIQN  +  S+ +V +LL++YEA+LEKQ ++++LN+ Q   + LS  +N+K   + P                FPN        S++L  
Subjt:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSMGNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQFSSNFFGSIVLGR

Query:  PQFSPVLPNGSPILNDVH
        P FSP+LP+ S   N VH
Subjt:  PQFSPVLPNGSPILNDVH

TrEMBL top hitse value%identityAlignment
A0A6J1D6N7 uncharacterized protein LOC1110174387.0e-0947.31Show/hide
Query:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSM----GNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQFS
        LGIEYN FVTSIQNR +  +L +V  LL+AY+ RLEKQ SV+ LN+VQ N ANL +    G+   H   S ++ +P      P     PNQ S
Subjt:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSM----GNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQFS

A0A6J1DQX7 uncharacterized protein LOC1110223151.4e-1243.64Show/hide
Query:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSMGNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQFSSNFFGS-----
        LG EYN FVTSI NR + PSL +V +LL+AYEARL+KQ +V+ LN+ Q N  NLS+ +N+K               +PPP   FPN +  +F  S     
Subjt:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSMGNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQFSSNFFGS-----

Query:  ---IVLGRPQ
            +LG+PQ
Subjt:  ---IVLGRPQ

A0A7J0DER3 Uncharacterized protein8.6e-0741.57Show/hide
Query:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSMGNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQFS
        LG +YNPFVTSIQ++   PS+  VH+LL++Y+ARLE+Q++ + L+ +Q N ANL+                  P  K P T+ FPN  S
Subjt:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSMGNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQFS

A0A7J0E8R3 Uncharacterized protein8.6e-0741.57Show/hide
Query:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSMGNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQFS
        LG +YNPFVTSIQ++   PS+  VH+LL++Y+ARLE+Q++ + L+ +Q N ANL+                  P  K P T+ FPN  S
Subjt:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSMGNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQFS

A0A7J6DQI9 Uncharacterized protein5.6e-0636.52Show/hide
Query:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSMGNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQFSSNFFGSIVLGR
        LG EYN FVT I  R   P++  VH+LL++YEA LE+QT+   L+ +Q NFANLS           P      P+S+PP        F+  +       R
Subjt:  LGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSMGNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQFSSNFFGSIVLGR

Query:  PQFSPVLPNGSPILN
        P FS        I+N
Subjt:  PQFSPVLPNGSPILN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCATCATCCACTGCTAAGATTATGGGTTTACGGTCTCAGCTACAGAAAATTAGGAAGGATGTGTCTTGGCATTGAGTACAACCCCTTTGTTACTTCCATCCAAAA
TCGAGACAATTGTCCCTCCCTTGCCAATGTCCACAACCTCCTTATAGCATATGAAGCTCGTCTTGAAAAACAAACCTCTGTCAACAACCTTAATTTGGTCCAGGAGAACT
TTGCGAACCTATCGATGGGAAACAATGCCAAACATTTCCAAATGTCTCCCAACACCTCTAAACCAGCTCCCACCTCTAAGCCTCCTCCTACCTCTATTTTTCCCAATCAA
TTCTCTAGTAATTTCTTTGGTTCCATCGTTCTTGGTCGTCCCCAATTCTCCCCCGTCCTCCCCAATGGTTCTCCAATTCTCAACGACGTCCACAATGTCAAATCTGTGGA
AAGCTTGGCCATATCGCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTCATCATCCACTGCTAAGATTATGGGTTTACGGTCTCAGCTACAGAAAATTAGGAAGGATGTGTCTTGGCATTGAGTACAACCCCTTTGTTACTTCCATCCAAAA
TCGAGACAATTGTCCCTCCCTTGCCAATGTCCACAACCTCCTTATAGCATATGAAGCTCGTCTTGAAAAACAAACCTCTGTCAACAACCTTAATTTGGTCCAGGAGAACT
TTGCGAACCTATCGATGGGAAACAATGCCAAACATTTCCAAATGTCTCCCAACACCTCTAAACCAGCTCCCACCTCTAAGCCTCCTCCTACCTCTATTTTTCCCAATCAA
TTCTCTAGTAATTTCTTTGGTTCCATCGTTCTTGGTCGTCCCCAATTCTCCCCCGTCCTCCCCAATGGTTCTCCAATTCTCAACGACGTCCACAATGTCAAATCTGTGGA
AAGCTTGGCCATATCGCCCTAG
Protein sequenceShow/hide protein sequence
MSHHPLLRLWVYGLSYRKLGRMCLGIEYNPFVTSIQNRDNCPSLANVHNLLIAYEARLEKQTSVNNLNLVQENFANLSMGNNAKHFQMSPNTSKPAPTSKPPPTSIFPNQ
FSSNFFGSIVLGRPQFSPVLPNGSPILNDVHNVKSVESLAISP