; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026352 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026352
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPol
Genome locationchr10:35274491..35281155
RNA-Seq ExpressionLag0026352
SyntenyLag0026352
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM98543.1 hypothetical protein AMTR_s04311p00004950, partial [Amborella trichopoda]1.7e-11181.3Show/hide
Query:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA
        MVVRSLDV+KD FRPRE++EELLGPEVPYLSAIGALMYL N TRPDIAFSVNLLAR+SS+PT RHW G+KHILRYL+GTID GLFYSN     L+GYADA
Subjt:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA

Query:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT
         YLSDPHKARSQTGYLFT G TAISWRS KQT+  TSSNHAEILAIHEASRECVWLRSMTQHI  TCGL+SNK  PT LYEDN  CIAQ+KGGYIKGDRT
Subjt:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT

Query:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKL
        KHISPK F+TH+L+EN DI VQQI S DNLADLFTK+LPT+TFEK+
Subjt:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKL

KAA0067250.1 Pol [Cucumis melo var. makuwa]2.1e-12289.43Show/hide
Query:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA
        MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALM L NNTRPDIAFSVNLLARYSSSPTKRHWNGVKH+LRYLRGTIDM LFYSNKSNFDLVGYADA
Subjt:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA

Query:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT
         YLSDP KARSQ GYLFT+GGTAISWRS+KQT+T TSSNHAEILAIHE SRECVWLRSMT HI ETCGLS +K  PT L+EDNT CIAQIKGGYIKGDRT
Subjt:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT

Query:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKL
        KH+SPKLFYTH+LEEN DISVQQISSKDNL DLFTKALPT TFEKL
Subjt:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKL

RVW51051.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]2.9e-11175.46Show/hide
Query:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA
        MVVRSLDVKKD FRP E +EELLGPEVPYLSAIGALMYL N TRPDIAFSVNLLARYSSSPT+RHWNG+KHILRYLRGT DMGLFYS +S   L+GYADA
Subjt:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA

Query:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT
         YLSDPHK RSQTGY+F Y GTAISWRS+KQT+  TSSNH+EILAIHEASREC+WLRSM QHI E+CGLSS KG PTTL+EDN  CIAQI GGYIKGDRT
Subjt:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT

Query:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKLCTTLECDDSEISNDVFMRGSKYI
        KHISPK FYTH+L+++ +I VQQI S DNLADLFTK+LPT+TF+KL   +     +   D+ MRGS  +
Subjt:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKLCTTLECDDSEISNDVFMRGSKYI

RVW94544.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]2.9e-11175.46Show/hide
Query:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA
        MVVRSLDVKKD FRP E +EELLGPEVPYLSAIGALMYL N TRPDIAFSVNLLARYSSSPT+RHWNG+KHILRYLRGT DMGLFYS +S   L+GYADA
Subjt:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA

Query:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT
         YLSDPHK RSQTGY+F Y GTAISWRS+KQT+  TSSNH+EILAIHEASREC+WLRSM QHI E+CGLSS KG PTTL+EDN  CIAQI GGYIKGDRT
Subjt:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT

Query:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKLCTTLECDDSEISNDVFMRGSKYI
        KHISPK FYTH+L+++ +I VQQI S DNLADLFTK+LPT+TF+KL   +     +   D+ MRGS  +
Subjt:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKLCTTLECDDSEISNDVFMRGSKYI

TYK21506.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.8e-12289.43Show/hide
Query:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA
        M+VRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYL NNTRPDIAFSVNLLARYS SPTKRHWNGVKH+LRYLRGTIDMGLFYSNKSNFDLVGYADA
Subjt:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA

Query:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT
         +LSDPHKARSQTGYLFT  GTAISWRS+KQT+T TSSNHAEILAIHEASRECVWLRSMT +I ETCGLS +K  PT L+EDNT CI QIKGGYIKGDRT
Subjt:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT

Query:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKL
        KHISPKLFYTHDLEEN DISVQQISSKDNL DLFTKAL T+TFEKL
Subjt:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKL

TrEMBL top hitse value%identityAlignment
A0A438ETG9 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-11175.46Show/hide
Query:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA
        MVVRSLDVKKD FRP E +EELLGPEVPYLSAIGALMYL N TRPDIAFSVNLLARYSSSPT+RHWNG+KHILRYLRGT DMGLFYS +S   L+GYADA
Subjt:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA

Query:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT
         YLSDPHK RSQTGY+F Y GTAISWRS+KQT+  TSSNH+EILAIHEASREC+WLRSM QHI E+CGLSS KG PTTL+EDN  CIAQI GGYIKGDRT
Subjt:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT

Query:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKLCTTLECDDSEISNDVFMRGSKYI
        KHISPK FYTH+L+++ +I VQQI S DNLADLFTK+LPT+TF+KL   +     +   D+ MRGS  +
Subjt:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKLCTTLECDDSEISNDVFMRGSKYI

A0A438ID00 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-11175.46Show/hide
Query:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA
        MVVRSLDVKKD FRP E +EELLGPEVPYLSAIGALMYL N TRPDIAFSVNLLARYSSSPT+RHWNG+KHILRYLRGT DMGLFYS +S   L+GYADA
Subjt:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA

Query:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT
         YLSDPHK RSQTGY+F Y GTAISWRS+KQT+  TSSNH+EILAIHEASREC+WLRSM QHI E+CGLSS KG PTTL+EDN  CIAQI GGYIKGDRT
Subjt:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT

Query:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKLCTTLECDDSEISNDVFMRGSKYI
        KHISPK FYTH+L+++ +I VQQI S DNLADLFTK+LPT+TF+KL   +     +   D+ MRGS  +
Subjt:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKLCTTLECDDSEISNDVFMRGSKYI

A0A5D3CKU4 Pol1.0e-12289.43Show/hide
Query:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA
        MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALM L NNTRPDIAFSVNLLARYSSSPTKRHWNGVKH+LRYLRGTIDM LFYSNKSNFDLVGYADA
Subjt:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA

Query:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT
         YLSDP KARSQ GYLFT+GGTAISWRS+KQT+T TSSNHAEILAIHE SRECVWLRSMT HI ETCGLS +K  PT L+EDNT CIAQIKGGYIKGDRT
Subjt:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT

Query:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKL
        KH+SPKLFYTH+LEEN DISVQQISSKDNL DLFTKALPT TFEKL
Subjt:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKL

A0A5D3DD63 Retrovirus-related Pol polyprotein from transposon TNT 1-942.3e-12289.43Show/hide
Query:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA
        M+VRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYL NNTRPDIAFSVNLLARYS SPTKRHWNGVKH+LRYLRGTIDMGLFYSNKSNFDLVGYADA
Subjt:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA

Query:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT
         +LSDPHKARSQTGYLFT  GTAISWRS+KQT+T TSSNHAEILAIHEASRECVWLRSMT +I ETCGLS +K  PT L+EDNT CI QIKGGYIKGDRT
Subjt:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT

Query:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKL
        KHISPKLFYTHDLEEN DISVQQISSKDNL DLFTKAL T+TFEKL
Subjt:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKL

U5CXL6 Uncharacterized protein (Fragment)8.2e-11281.3Show/hide
Query:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA
        MVVRSLDV+KD FRPRE++EELLGPEVPYLSAIGALMYL N TRPDIAFSVNLLAR+SS+PT RHW G+KHILRYL+GTID GLFYSN     L+GYADA
Subjt:  MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADA

Query:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT
         YLSDPHKARSQTGYLFT G TAISWRS KQT+  TSSNHAEILAIHEASRECVWLRSMTQHI  TCGL+SNK  PT LYEDN  CIAQ+KGGYIKGDRT
Subjt:  CYLSDPHKARSQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRT

Query:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKL
        KHISPK F+TH+L+EN DI VQQI S DNLADLFTK+LPT+TFEK+
Subjt:  KHISPKLFYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKL

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.0e-3436.11Show/hide
Query:  PREDNEELLGPE----VPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFD--LVGYADACYLSDPHK
        P + N ELL  +     P  S IG LMY+   TRPD+  +VN+L+RYSS      W  +K +LRYL+GTIDM L +     F+  ++GY D+ +      
Subjt:  PREDNEELLGPE----VPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFD--LVGYADACYLSDPHK

Query:  ARSQTGYLF-TYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRTKHISPKL
         +S TGYLF  +    I W + +Q     SS  AE +A+ EA RE +WL+ +   I      +     P  +YEDN GCI+ I        R KHI  K 
Subjt:  ARSQTGYLF-TYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRTKHISPKL

Query:  FYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKLCTTLECDDSEISN
         +  +  +N  I ++ I +++ LAD+FTK LP A F +L   L     + SN
Subjt:  FYTHDLEENCDISVQQISSKDNLADLFTKALPTATFEKLCTTLECDDSEISN

P0CV72 Secreted RxLR effector protein 1615.4e-2845.19Show/hide
Query:  VPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADACYLSDPHKARSQTGYLFTYGGTAISW
        VPYLSA+GA+MYL   TRPD+A +V +L++++S P   HW  +K +LRYL+ T   GL ++      LVGY+DA +  D    RS +GYLF   G  +SW
Subjt:  VPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADACYLSDPHKARSQTGYLFTYGGTAISW

Query:  RSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQ
        RS KQ     SS   E +A+ EA++E VWL   T+
Subjt:  RSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQ

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.5e-3338.67Show/hide
Query:  EVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADACYLSDPHKARSQTGYLFTYGGTAIS
        +VPY SA+G+LMY    TRPDIA +V +++R+  +P K HW  VK ILRYLRGT    L +   S+  L GY DA    D    +S TGYLFT+ G AIS
Subjt:  EVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADACYLSDPHKARSQTGYLFTYGGTAIS

Query:  WRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRTKHISPKLFYTHDLEENCDISVQQIS
        W+S  Q     S+  AE +A  E  +E +WL+   Q +    GL   +     +Y D+   I   K       RTKHI  +  +  ++ ++  + V +IS
Subjt:  WRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRTKHISPKLFYTHDLEENCDISVQQIS

Query:  SKDNLADLFTKALPTATFEKLCTTL
        + +N AD+ TK +P   FE LC  L
Subjt:  SKDNLADLFTKALPTATFEKLCTTL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.8e-2331.08Show/hide
Query:  YLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADACYLSDPHKARSQTGYLFTYGGTAISWRS
        Y   +G+L YL   TRPDI+++VN L+++   PT+ H   +K ILRYL GT + G+F    +   L  Y+DA +  D     S  GY+   G   ISW S
Subjt:  YLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADACYLSDPHKARSQTGYLFTYGGTAISWRS

Query:  MKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRTKHISPKLFYTHDLEENCDISVQQISSKD
         KQ     SS  AE  ++   S E  W+ S+   +    G+   +  P  +Y DN G    +    +   R KHI+    +  +  ++  + V  +S+ D
Subjt:  MKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRTKHISPKLFYTHDLEENCDISVQQISSKD

Query:  NLADLFTKALPTATFEKLCTTL
         LAD  TK L    F+   + +
Subjt:  NLADLFTKALPTATFEKLCTTL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.9e-2532.87Show/hide
Query:  YLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADACYLSDPHKARSQTGYLFTYGGTAISWRS
        Y   +G+L YL   TRPD++++VN L++Y   PT  HWN +K +LRYL GT D G+F    +   L  Y+DA +  D     S  GY+   G   ISW S
Subjt:  YLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADACYLSDPHKARSQTGYLFTYGGTAISWRS

Query:  MKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRTKHISPKLFYTHDLEENCDISVQQISSKD
         KQ     SS  AE  ++   S E  W+ S+         L      P  +Y DN G    +    +   R KHI+    +  +  ++  + V  +S+ D
Subjt:  MKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRTKHISPKLFYTHDLEENCDISVQQISSKD

Query:  NLADLFTKALPTATFE
         LAD  TK L    F+
Subjt:  NLADLFTKALPTATFE

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.7e-2438.86Show/hide
Query:  YLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADACYLSDPHKARSQTGYLFTYGGTAISWRS
        Y   IG LMYL   TR DI+F+VN L+++S +P   H   V  IL Y++GT+  GLFYS+++   L  ++DA + S     RS  GY    G + ISW+S
Subjt:  YLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADACYLSDPHKARSQTGYLFTYGGTAISWRS

Query:  MKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRTKHI
         KQ + + SS  AE  A+  A+ E +WL    + +     L  +K  PT L+ DNT  I  I    +  +RTKHI
Subjt:  MKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRTKHI

ATMG00240.1 Gag-Pol-related retrotransposon family protein3.6e-1143.04Show/hide
Query:  MYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADACYLSDPHKARSQTGY
        MYLT  TRPD+ F+VN L+++SS+        V  +L Y++GT+  GLFYS  S+  L  +AD+ + S P   RS TG+
Subjt:  MYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADACYLSDPHKARSQTGY

ATMG00810.1 DNA/RNA polymerases superfamily protein9.3e-1533.07Show/hide
Query:  YLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADACYLSDPHKARSQTGYLFTYGGTAISWRS
        + S +GAL YLT  TRPDI+++VN++ +    PT   ++ +K +LRY++GTI  GL+    S  ++  + D+ +       RS TG+    G   ISW +
Subjt:  YLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADACYLSDPHKARSQTGYLFTYGGTAISWRS

Query:  MKQTITTTSSNHAEILAIHEASRECVW
         +Q   + SS   E  A+   + E  W
Subjt:  MKQTITTTSSNHAEILAIHEASRECVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGTTCGTTCACTCGATGTAAAGAAAGACATCTTCCGACCTCGAGAAGATAATGAAGAGCTTCTTGGTCCAGAAGTACCATATCTTAGTGCAATAGGTGCACTTAT
GTATCTTACTAATAATACACGACCTGATATAGCATTTTCAGTAAATTTATTAGCTAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATGGAGTTAAACACATCCTCC
GTTATCTTCGAGGGACAATTGATATGGGTTTATTTTATTCTAATAAATCAAACTTTGATCTAGTTGGTTATGCAGATGCATGTTATTTATCTGACCCACATAAAGCTAGA
TCTCAAACAGGTTATTTATTTACATATGGAGGAACTGCTATATCATGGCGATCTATGAAGCAGACAATAACAACTACTTCCTCAAACCATGCTGAGATCCTGGCAATTCA
TGAGGCTAGTCGAGAATGTGTATGGCTAAGATCAATGACTCAACACATTTGTGAAACATGCGGATTGTCCTCTAACAAAGGTTGTCCAACAACGTTATATGAAGACAATA
CAGGATGTATAGCCCAAATCAAAGGAGGATACATTAAAGGAGATAGAACGAAGCACATCTCACCAAAGCTCTTCTACACTCACGATCTTGAAGAAAATTGTGATATCAGT
GTTCAACAAATTTCTTCAAAAGACAATTTGGCAGATCTATTTACGAAGGCATTACCTACTGCGACCTTTGAGAAGTTGTGCACAACATTGGAATGCGACGACTCAGAGAT
CTCAAATGATGTTTTCATGAGGGGGAGTAAATACATTGCACTCTTTTCCCCTTCGCTATGGTTTTTTTTCCACTGGGTTTTCCTAGCAAGCGCATCGAACCGCTCACTGT
CGCGCGCTCAATGTACTGCTGTTGTGCACGAAGAAACAGTCGGAGACGAAGTGGAGCTCACTGTGCGCGAAGAAACTGTCGGAGGGAGAGATGAGATGAAGAGGAGAGAT
GAGAGAGGGAAAGAGAAAGAAAGAAGAAAAAAAAGAGAAAAAGAAAAAATCCTCCAGCGGCCGACAGCAACAACGACGGTGGTCAGTGCCGGCAGCTATGGTGATGGTTT
AGGATGGGGGGAAGACGTGGCCTGCAAGACGGTAAACCTGCACACCGGTGTGGTGCTAGCCACACCGACTCCGATGCTTAAGTCAGAAAACGGAAGTACGAAGGCTAGAG
AGAATTCAGAGGCGTTTTGGGACGAACTAGGCGAAACCGAGGCGGCCAGAGGCGGTATGGACCGAACAGAGTCGGTGGGACTCGGCCTTGGCCCATGGCCGAGGCCGAGC
ATGGGGTCGGGCCAAAATCCCGATCCCTTCGGTCTTGGCCTGGTCCACTGGCCCGTTTCTCCGCCCGGGTCCATCTTCCAGTCCGATTTCTGTCCGGTTGTCCTCGTCAG
CTCCTTGTGCATCGGGGTGATCCAAAATTACCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGTTCGTTCACTCGATGTAAAGAAAGACATCTTCCGACCTCGAGAAGATAATGAAGAGCTTCTTGGTCCAGAAGTACCATATCTTAGTGCAATAGGTGCACTTAT
GTATCTTACTAATAATACACGACCTGATATAGCATTTTCAGTAAATTTATTAGCTAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATGGAGTTAAACACATCCTCC
GTTATCTTCGAGGGACAATTGATATGGGTTTATTTTATTCTAATAAATCAAACTTTGATCTAGTTGGTTATGCAGATGCATGTTATTTATCTGACCCACATAAAGCTAGA
TCTCAAACAGGTTATTTATTTACATATGGAGGAACTGCTATATCATGGCGATCTATGAAGCAGACAATAACAACTACTTCCTCAAACCATGCTGAGATCCTGGCAATTCA
TGAGGCTAGTCGAGAATGTGTATGGCTAAGATCAATGACTCAACACATTTGTGAAACATGCGGATTGTCCTCTAACAAAGGTTGTCCAACAACGTTATATGAAGACAATA
CAGGATGTATAGCCCAAATCAAAGGAGGATACATTAAAGGAGATAGAACGAAGCACATCTCACCAAAGCTCTTCTACACTCACGATCTTGAAGAAAATTGTGATATCAGT
GTTCAACAAATTTCTTCAAAAGACAATTTGGCAGATCTATTTACGAAGGCATTACCTACTGCGACCTTTGAGAAGTTGTGCACAACATTGGAATGCGACGACTCAGAGAT
CTCAAATGATGTTTTCATGAGGGGGAGTAAATACATTGCACTCTTTTCCCCTTCGCTATGGTTTTTTTTCCACTGGGTTTTCCTAGCAAGCGCATCGAACCGCTCACTGT
CGCGCGCTCAATGTACTGCTGTTGTGCACGAAGAAACAGTCGGAGACGAAGTGGAGCTCACTGTGCGCGAAGAAACTGTCGGAGGGAGAGATGAGATGAAGAGGAGAGAT
GAGAGAGGGAAAGAGAAAGAAAGAAGAAAAAAAAGAGAAAAAGAAAAAATCCTCCAGCGGCCGACAGCAACAACGACGGTGGTCAGTGCCGGCAGCTATGGTGATGGTTT
AGGATGGGGGGAAGACGTGGCCTGCAAGACGGTAAACCTGCACACCGGTGTGGTGCTAGCCACACCGACTCCGATGCTTAAGTCAGAAAACGGAAGTACGAAGGCTAGAG
AGAATTCAGAGGCGTTTTGGGACGAACTAGGCGAAACCGAGGCGGCCAGAGGCGGTATGGACCGAACAGAGTCGGTGGGACTCGGCCTTGGCCCATGGCCGAGGCCGAGC
ATGGGGTCGGGCCAAAATCCCGATCCCTTCGGTCTTGGCCTGGTCCACTGGCCCGTTTCTCCGCCCGGGTCCATCTTCCAGTCCGATTTCTGTCCGGTTGTCCTCGTCAG
CTCCTTGTGCATCGGGGTGATCCAAAATTACCTATAA
Protein sequenceShow/hide protein sequence
MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLTNNTRPDIAFSVNLLARYSSSPTKRHWNGVKHILRYLRGTIDMGLFYSNKSNFDLVGYADACYLSDPHKAR
SQTGYLFTYGGTAISWRSMKQTITTTSSNHAEILAIHEASRECVWLRSMTQHICETCGLSSNKGCPTTLYEDNTGCIAQIKGGYIKGDRTKHISPKLFYTHDLEENCDIS
VQQISSKDNLADLFTKALPTATFEKLCTTLECDDSEISNDVFMRGSKYIALFSPSLWFFFHWVFLASASNRSLSRAQCTAVVHEETVGDEVELTVREETVGGRDEMKRRD
ERGKEKERRKKREKEKILQRPTATTTVVSAGSYGDGLGWGEDVACKTVNLHTGVVLATPTPMLKSENGSTKARENSEAFWDELGETEAARGGMDRTESVGLGLGPWPRPS
MGSGQNPDPFGLGLVHWPVSPPGSIFQSDFCPVVLVSSLCIGVIQNYL