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Lag0026353 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026353
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr10:35301193..35301897
RNA-Seq ExpressionLag0026353
SyntenyLag0026353
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4366980.1 hypothetical protein F8388_022768 [Cannabis sativa]1.7e-1333.83Show/hide
Query:  WWKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHC---------------------RFMFNLLRKVRDKVGWENF
        WWK  WK  +P ++K+F WR+C + LP   NLC RGM++  VC LCG   E+  H  W C                       MF++L  +R+K+    F
Subjt:  WWKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHC---------------------RFMFNLLRKVRDKVGWENF

Query:  ELFVVVLWVVWNCRNERKFKGLEPTVG--LVEW
        E  + ++W +W  RN RK+  L    G  L++W
Subjt:  ELFVVVLWVVWNCRNERKFKGLEPTVG--LVEW

KAF8408042.1 hypothetical protein HHK36_007182 [Tetracentron sinense]9.8e-1432.37Show/hide
Query:  WKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHCRF---------------------MFNLLRKVRDKVGWENFE
        W   W+  IP K+KIF+W++ L+ LP   NLC R + V NVCG+CG  GE+ LHV  +C +                     + + + ++    G E   
Subjt:  WKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHCRF---------------------MFNLLRKVRDKVGWENFE

Query:  LFVVVLWVVWNCRNERKFKGLEPT-VGLVEWAMRLLGGF
         F ++ W +W  RNE  F G++ T    V+ A +LL  F
Subjt:  LFVVVLWVVWNCRNERKFKGLEPT-VGLVEWAMRLLGGF

XP_022143319.1 uncharacterized protein LOC111013220 [Momordica charantia]1.1e-1737.88Show/hide
Query:  WWKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHCRF---------------------MFNLLRKVRDKVGWENF
        WWK  W+  +P+KIK+F WR CLD LPT  NL  RG+DV +    CG+ GE +LH+FW C+                      + +LLR     + W +F
Subjt:  WWKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHCRF---------------------MFNLLRKVRDKVGWENF

Query:  ELFVVVLWVVWNCRNERKF-KGLEPTVGLVEW
        E  VV LW +W+ RN + F  G E    L  W
Subjt:  ELFVVVLWVVWNCRNERKF-KGLEPTVGLVEW

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]4.7e-2446.15Show/hide
Query:  WWKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHCRFM--------------FNLLRKVRDKVGWENFELFVVVL
        WW G WK  IPNKIK+FLWRLCLD LPT  NL  RG+++ N C  CGR+GE S+H+FW C+F               F +LR+  + +   +FE   VV+
Subjt:  WWKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHCRFM--------------FNLLRKVRDKVGWENFELFVVVL

Query:  WVVWNCRNERKFKGLEPTV-----GLVEWA
        W +WN RN R F     TV      LVEWA
Subjt:  WVVWNCRNERKFKGLEPTV-----GLVEWA

XP_030938668.1 uncharacterized protein LOC115963692 [Quercus lobata]4.9e-1332.17Show/hide
Query:  WKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHCRF---------------------MFNLLRKVRDKVGWENFE
        W G W   +P K++ FLWR C +CLPT +NL  R + V   C LC    E++ H+ W C F                      F L R VRD++   + E
Subjt:  WKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHCRF---------------------MFNLLRKVRDKVGWENFE

Query:  LFVVVLWVVWNCRNERKFK--GLEP------TVGLVEWAMRLL
         +   +W +WN RN   F+   L+P        GL+E   RL+
Subjt:  LFVVVLWVVWNCRNERKFK--GLEP------TVGLVEWAMRLL

TrEMBL top hitse value%identityAlignment
A0A6J1CNZ5 uncharacterized protein LOC1110132205.4e-1837.88Show/hide
Query:  WWKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHCRF---------------------MFNLLRKVRDKVGWENF
        WWK  W+  +P+KIK+F WR CLD LPT  NL  RG+DV +    CG+ GE +LH+FW C+                      + +LLR     + W +F
Subjt:  WWKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHCRF---------------------MFNLLRKVRDKVGWENF

Query:  ELFVVVLWVVWNCRNERKF-KGLEPTVGLVEW
        E  VV LW +W+ RN + F  G E    L  W
Subjt:  ELFVVVLWVVWNCRNERKF-KGLEPTVGLVEW

A0A6J1DAR4 uncharacterized protein LOC1110189542.3e-2446.15Show/hide
Query:  WWKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHCRFM--------------FNLLRKVRDKVGWENFELFVVVL
        WW G WK  IPNKIK+FLWRLCLD LPT  NL  RG+++ N C  CGR+GE S+H+FW C+F               F +LR+  + +   +FE   VV+
Subjt:  WWKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHCRFM--------------FNLLRKVRDKVGWENFELFVVVL

Query:  WVVWNCRNERKFKGLEPTV-----GLVEWA
        W +WN RN R F     TV      LVEWA
Subjt:  WVVWNCRNERKFKGLEPTV-----GLVEWA

A0A7J6FB29 Uncharacterized protein8.1e-1433.83Show/hide
Query:  WWKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHC---------------------RFMFNLLRKVRDKVGWENF
        WWK  WK  +P ++K+F WR+C + LP   NLC RGM++  VC LCG   E+  H  W C                       MF++L  +R+K+    F
Subjt:  WWKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHC---------------------RFMFNLLRKVRDKVGWENF

Query:  ELFVVVLWVVWNCRNERKFKGLEPTVG--LVEW
        E  + ++W +W  RN RK+  L    G  L++W
Subjt:  ELFVVVLWVVWNCRNERKFKGLEPTVG--LVEW

A0A7J6FZV2 RNase H domain-containing protein3.1e-1333.83Show/hide
Query:  WWKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHC---------------------RFMFNLLRKVRDKVGWENF
        WWK  WK  +P ++K+F WR+C + LP   NLC RGM++  VC LCG   E+  H  W C                       MF++L  +R K+    F
Subjt:  WWKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHC---------------------RFMFNLLRKVRDKVGWENF

Query:  ELFVVVLWVVWNCRNERKFKGLEPTVG--LVEW
        E  + ++W +W  RN RK+  L    G  L++W
Subjt:  ELFVVVLWVVWNCRNERKFKGLEPTVG--LVEW

A0A803QE56 Uncharacterized protein1.1e-1332.86Show/hide
Query:  MGWWKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSG-ESSLHVFWHCRFMFNLLRK-------------------VRDKVGW--
        M WW+G WK  +P K+K F+W++    LPT   L  RGMDV   C  C   G E+  H  W C    ++ ++                   +R    W  
Subjt:  MGWWKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSG-ESSLHVFWHCRFMFNLLRK-------------------VRDKVGW--

Query:  ENFELFVVVLWVVWNCRNERKFKGLEP-TVGLVEWAMRLL
        E FELF+VV W +W  RN  K  G++P    + EW ++ L
Subjt:  ENFELFVVVLWVVWNCRNERKFKGLEP-TVGLVEWAMRLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGTGGAAGGGGTGTTGGAAAACGTTGATTCCAAATAAGATTAAGATTTTCTTATGGAGACTTTGTTTAGACTGTCTGCCTACAATTGATAATTTGTGTTTTCG
GGGTATGGATGTGTTGAATGTGTGTGGCCTCTGTGGCCGGAGTGGGGAGTCTAGTTTGCATGTTTTCTGGCATTGCAGGTTTATGTTTAATCTCCTTAGGAAGGTGAGAG
ATAAGGTTGGTTGGGAAAATTTTGAGTTGTTTGTGGTGGTGTTGTGGGTCGTGTGGAATTGTCGCAATGAGCGGAAATTTAAGGGTCTTGAGCCAACAGTGGGACTAGTG
GAGTGGGCGATGCGTCTTTTAGGCGGGTTTGGGTGTGGTGGTTCAGGATTTTTCCAGGCGGGTTATGCTGTCGGCAACGTTGGTGAAACGGCACGTGCGAAGTCTAGAGA
TGGTCGAAGGATGGGTTACGGTGAGGGGGATGAGACTGGCAGTGGAGATGGGTATGTTCCCATTGGTGTTGGAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGGTGGAAGGGGTGTTGGAAAACGTTGATTCCAAATAAGATTAAGATTTTCTTATGGAGACTTTGTTTAGACTGTCTGCCTACAATTGATAATTTGTGTTTTCG
GGGTATGGATGTGTTGAATGTGTGTGGCCTCTGTGGCCGGAGTGGGGAGTCTAGTTTGCATGTTTTCTGGCATTGCAGGTTTATGTTTAATCTCCTTAGGAAGGTGAGAG
ATAAGGTTGGTTGGGAAAATTTTGAGTTGTTTGTGGTGGTGTTGTGGGTCGTGTGGAATTGTCGCAATGAGCGGAAATTTAAGGGTCTTGAGCCAACAGTGGGACTAGTG
GAGTGGGCGATGCGTCTTTTAGGCGGGTTTGGGTGTGGTGGTTCAGGATTTTTCCAGGCGGGTTATGCTGTCGGCAACGTTGGTGAAACGGCACGTGCGAAGTCTAGAGA
TGGTCGAAGGATGGGTTACGGTGAGGGGGATGAGACTGGCAGTGGAGATGGGTATGTTCCCATTGGTGTTGGAGATTGA
Protein sequenceShow/hide protein sequence
MGWWKGCWKTLIPNKIKIFLWRLCLDCLPTIDNLCFRGMDVLNVCGLCGRSGESSLHVFWHCRFMFNLLRKVRDKVGWENFELFVVVLWVVWNCRNERKFKGLEPTVGLV
EWAMRLLGGFGCGGSGFFQAGYAVGNVGETARAKSRDGRRMGYGEGDETGSGDGYVPIGVGD