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Lag0026372 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026372
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr10:35646909..35648603
RNA-Seq ExpressionLag0026372
SyntenyLag0026372
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0869182.1 hypothetical protein [Gossypium schwendimanii]6.7e-0442.86Show/hide
Query:  DSLTLIKILKGDLVDDSGIAATLWDIRVLITSFEKVGFNFVSRKYNVFSHKMAKVGLSSS-PCLWLGNYP
        DSLT+IK LK +  D S ++     IRVL  +FE+V +NFV R+ N  +H++A VG +   PC W+   P
Subjt:  DSLTLIKILKGDLVDDSGIAATLWDIRVLITSFEKVGFNFVSRKYNVFSHKMAKVGLSSS-PCLWLGNYP
TrEMBL top hitse value%identityAlignment
A0A7J9MDM1 RNase H domain-containing protein3.2e-0442.86Show/hide
Query:  DSLTLIKILKGDLVDDSGIAATLWDIRVLITSFEKVGFNFVSRKYNVFSHKMAKVGLSSS-PCLWLGNYP
        DSLT+IK LK +  D S ++     IRVL  +FE+V +NFV R+ N  +H++A VG +   PC W+   P
Subjt:  DSLTLIKILKGDLVDDSGIAATLWDIRVLITSFEKVGFNFVSRKYNVFSHKMAKVGLSSS-PCLWLGNYP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGATTCATTGACATTAATCAAGATTTTGAAGGGGGATTTGGTTGATGATTCTGGTATTGCTGCAACTTTGTGGGATATTAGAGTCCTAATCACTTCCTTTGAGAA
GGTAGGGTTTAATTTTGTTAGTCGTAAGTACAATGTATTCTCTCATAAGATGGCTAAAGTAGGTTTATCTTCGTCGCCTTGTTTGTGGCTAGGAAACTATCCTCAATGGA
TGGTTAGGGAATCGCTCCAGGAGCAAAATGATCGGTCTACTGACTTGTTGATCTTCTCGGATGATCGGTTTGATGATCAGTCTGCTGACTTGTTGATCTTCTTGGATGAT
CGAATTCTCTCGACTCTGAGTTCTCTGATCGGAATCTCCGAATCTGAATCCCTCCTGAATGAATGGTGGCCTCCTCTATTTATAGAGTTTGATGGACCTCATATGGGCTT
GGGCTTGGGTCCAATTGCCACGTGGCATAATCTGATTGAACTTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGATTCATTGACATTAATCAAGATTTTGAAGGGGGATTTGGTTGATGATTCTGGTATTGCTGCAACTTTGTGGGATATTAGAGTCCTAATCACTTCCTTTGAGAA
GGTAGGGTTTAATTTTGTTAGTCGTAAGTACAATGTATTCTCTCATAAGATGGCTAAAGTAGGTTTATCTTCGTCGCCTTGTTTGTGGCTAGGAAACTATCCTCAATGGA
TGGTTAGGGAATCGCTCCAGGAGCAAAATGATCGGTCTACTGACTTGTTGATCTTCTCGGATGATCGGTTTGATGATCAGTCTGCTGACTTGTTGATCTTCTTGGATGAT
CGAATTCTCTCGACTCTGAGTTCTCTGATCGGAATCTCCGAATCTGAATCCCTCCTGAATGAATGGTGGCCTCCTCTATTTATAGAGTTTGATGGACCTCATATGGGCTT
GGGCTTGGGTCCAATTGCCACGTGGCATAATCTGATTGAACTTGGCTGA
Protein sequenceShow/hide protein sequence
MLDSLTLIKILKGDLVDDSGIAATLWDIRVLITSFEKVGFNFVSRKYNVFSHKMAKVGLSSSPCLWLGNYPQWMVRESLQEQNDRSTDLLIFSDDRFDDQSADLLIFLDD
RILSTLSSLIGISESESLLNEWWPPLFIEFDGPHMGLGLGPIATWHNLIELG