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Lag0026376 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026376
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr10:35689592..35690353
RNA-Seq ExpressionLag0026376
SyntenyLag0026376
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MQL96670.1 hypothetical protein [Colocasia esculenta]2.0e-1537.67Show/hide
Query:  LLNSIGESQPRTYAEFMTLAQRYISAEELLRSKQEEREAEAGKSSPRPM-AEADRRLGS-------------------------LGVVRNQK----PEKL
        L  ++G  QP T AE +++AQR+ + EE L + + E+  ++ K  P    ++ DR+ G                          L  +RN+     P+++
Subjt:  LLNSIGESQPRTYAEFMTLAQRYISAEELLRSKQEEREAEAGKSSPRPM-AEADRRLGS-------------------------LGVVRNQK----PEKL

Query:  RSDPDRRNRNKYCMFHRDHGHTTWECIQLRDEIEALIREGYLKEFV
        RSDP +R++NKYC FHRDHGH T EC QL+DEIE LI+ GYL  FV
Subjt:  RSDPDRRNRNKYCMFHRDHGHTTWECIQLRDEIEALIREGYLKEFV

MQM08867.1 hypothetical protein [Colocasia esculenta]2.0e-1535.8Show/hide
Query:  SLHANTHRFGKAMGERLLNSIGESQPRTYAEFMTLAQRYISAEELLRSKQEEREAEAGKSSPRPM-AEADRRLGS-------------------------
        SL A   + G+A+ + +  ++G  QP T AE +++AQR+ + EE L + + E+  +  K  P    ++ DR+ G                          
Subjt:  SLHANTHRFGKAMGERLLNSIGESQPRTYAEFMTLAQRYISAEELLRSKQEEREAEAGKSSPRPM-AEADRRLGS-------------------------

Query:  LGVVRNQK----PEKLRSDPDRRNRNKYCMFHRDHGHTTWECIQLRDEIEALIREGYLKEFV
        L  +RN+     P+++RSDP RR++NKYC FHR+HGH T EC QL+DEIE LI+ GYL  F+
Subjt:  LGVVRNQK----PEKLRSDPDRRNRNKYCMFHRDHGHTTWECIQLRDEIEALIREGYLKEFV

MQM13883.1 hypothetical protein [Colocasia esculenta]1.2e-1538.62Show/hide
Query:  LNSIGESQPRTYAEFMTLAQRYISAEELLRSKQEEREAEAGKSSPRPM-AEADRRLGS-------------------------LGVVRNQK----PEKLR
        L ++G  QP T AE +++AQR+ + EE L + + E+  ++ K  P    ++ DR+ G                          L  +RN+     P+++R
Subjt:  LNSIGESQPRTYAEFMTLAQRYISAEELLRSKQEEREAEAGKSSPRPM-AEADRRLGS-------------------------LGVVRNQK----PEKLR

Query:  SDPDRRNRNKYCMFHRDHGHTTWECIQLRDEIEALIREGYLKEFV
        SDP RR++NKYC FHRDHGH T EC QL+DEIE LI+ GYL  FV
Subjt:  SDPDRRNRNKYCMFHRDHGHTTWECIQLRDEIEALIREGYLKEFV

MQM14562.1 hypothetical protein [Colocasia esculenta]6.9e-1637.67Show/hide
Query:  LLNSIGESQPRTYAEFMTLAQRYISAEELLRSKQEEREAEAGKSSPRPM-AEADRRLGS-------------------------LGVVRNQK----PEKL
        L  ++G  QP T AE +++AQR+ + EE L + + E+  ++ K  P    ++ DR+ G                          L  +RN+     P+++
Subjt:  LLNSIGESQPRTYAEFMTLAQRYISAEELLRSKQEEREAEAGKSSPRPM-AEADRRLGS-------------------------LGVVRNQK----PEKL

Query:  RSDPDRRNRNKYCMFHRDHGHTTWECIQLRDEIEALIREGYLKEFV
        RSDP +R++NKYC FHRDHGH T EC QL+DEIE LI+ GYL+ FV
Subjt:  RSDPDRRNRNKYCMFHRDHGHTTWECIQLRDEIEALIREGYLKEFV

XP_030958631.1 uncharacterized protein LOC115980538 [Quercus lobata]2.0e-1536.54Show/hide
Query:  LNSIGESQPRTYAEFMTLAQRYISAEELLRSKQEER-------EAEAGKSSPRP-------MAEAD-RRLGSLGVVRN---------------------Q
        ++ + E +P+T AE +  AQ +++AE+ + +K+ +R        A   + +PRP         E D R+ G LG  +N                     +
Subjt:  LNSIGESQPRTYAEFMTLAQRYISAEELLRSKQEER-------EAEAGKSSPRP-------MAEAD-RRLGSLGVVRN---------------------Q

Query:  KPEKLRSDPDRRNRNKYCMFHRDHGHTTWECIQLRDEIEALIREGYLKEFVGNDRS
         PEK++ DP++RN+NKYC FHRDHGH T EC  L+ +IE LIR+G LK FVG DR+
Subjt:  KPEKLRSDPDRRNRNKYCMFHRDHGHTTWECIQLRDEIEALIREGYLKEFVGNDRS

TrEMBL top hitse value%identityAlignment
A0A2N9EYJ1 Ribonuclease H1.2e-1341.46Show/hide
Query:  PRTYAEFMTLAQRYISAE-------ELLRSKQEERE-----AEAGKSSPRPMAEADRRLGSLGVVRNQKPEKLRSDPDRRNRNKYCMFHRDHGHTTWECI
        P++ +E M  AQ++I+AE       E L  K++E E     +   KSS +   +A+R+   L     + P KLRSDP +R+++ YC FHRDHGHTT +C 
Subjt:  PRTYAEFMTLAQRYISAE-------ELLRSKQEERE-----AEAGKSSPRPMAEADRRLGSLGVVRNQKPEKLRSDPDRRNRNKYCMFHRDHGHTTWECI

Query:  QLRDEIEALIREGYLKEFVGNDR
         L+ +IEALIR+G L +FV  D+
Subjt:  QLRDEIEALIREGYLKEFVGNDR

A0A6J1D3C7 uncharacterized protein LOC1110166269.7e-1638.73Show/hide
Query:  ERLLNSIGESQPRTYAEFMTLAQRYISAEELL-------------------RSKQEEREAEAGKSSPRPMAEADRRLGSLGVVRNQKPEKLRSDPDRRNR
        E L+  +GE  P T+AE +  A++ I  +ELL                   + K + +  + G SS    A+  RRLG     +  +PEKLR D ++RN+
Subjt:  ERLLNSIGESQPRTYAEFMTLAQRYISAEELL-------------------RSKQEEREAEAGKSSPRPMAEADRRLGSLGVVRNQKPEKLRSDPDRRNR

Query:  NKYCMFHRDHGHTTWECIQLRDEIEALIREGYLKEFVGNDRS
        +KYC FHRDHGH T  C +L+ +IE LI++GY K+FVG  RS
Subjt:  NKYCMFHRDHGHTTWECIQLRDEIEALIREGYLKEFVGNDRS

A0A6J1DWY0 uncharacterized protein LOC1110252931.5e-1332.89Show/hide
Query:  ERLLNSIGESQPRTYAEFMTLAQRYISAEELLRSKQEEREAEAGKSSPRPMAEADRRLGS------------------------------LGVVRNQK--
        E L  S G+  P T++E ++ AQRY+SA E   SK   RE +  ++ P+     D+  GS                              L  +++Q+  
Subjt:  ERLLNSIGESQPRTYAEFMTLAQRYISAEELLRSKQEEREAEAGKSSPRPMAEADRRLGS------------------------------LGVVRNQK--

Query:  --PEKLRSDPDRRNRNKYCMFHRDHGHTTWECIQLRDEIEALIREGYLKEFV
          PE++++   +R++ +YC+FHRDHGH T +C  L++E+E LIR GYLKE+V
Subjt:  --PEKLRSDPDRRNRNKYCMFHRDHGHTTWECIQLRDEIEALIREGYLKEFV

A0A6J1DZ52 uncharacterized protein LOC1110256121.1e-1434.67Show/hide
Query:  ERLLNSIGESQPRTYAEFMTLAQRYISAEELLRSKQE--------EREAEAGKSSPRPMAEADRRLGS--------------------LGVVRNQK----
        E L  S G+  P T+AE ++ AQ+Y+SAEE    K+E        +RE    K       + DR +G                     L  +++Q+    
Subjt:  ERLLNSIGESQPRTYAEFMTLAQRYISAEELLRSKQE--------EREAEAGKSSPRPMAEADRRLGS--------------------LGVVRNQK----

Query:  PEKLRSDPDRRNRNKYCMFHRDHGHTTWECIQLRDEIEALIREGYLKEFV
        PE +++ P++R++ +YC+FHRDHGH T +C  L++E+E LIR+GYLKE+V
Subjt:  PEKLRSDPDRRNRNKYCMFHRDHGHTTWECIQLRDEIEALIREGYLKEFV

A0A6J1E1B3 uncharacterized protein LOC1110255219.1e-1433.73Show/hide
Query:  ERLLNSIGESQPRTYAEFMTLAQRYISAEELLRSK--QEEREAEAG---------------KSSPRPMAEADRR-------------------LGSLGVV
        E L   +GE  P T+AE +  A++ I  +ELLR+K  + E++ + G               K S    ++AD R                   + S  ++
Subjt:  ERLLNSIGESQPRTYAEFMTLAQRYISAEELLRSK--QEEREAEAG---------------KSSPRPMAEADRR-------------------LGSLGVV

Query:  RN----------QKPEKLRSDPDRRNRNKYCMFHRDHGHTTWECIQLRDEIEALIREGYLKEFVGNDRS
         N          ++P+KLR DP++RN++KYC FHRDHGH T  C +L+ +IE LI+ GY K+FVG  RS
Subjt:  RN----------QKPEKLRSDPDRRNRNKYCMFHRDHGHTTWECIQLRDEIEALIREGYLKEFVGNDRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAAGACGAAGCGTCAAGGTGCCGAGCCTTCACGCTAACACTCACAGGTTTGGCAAGGCAATGGGTGAAAGACTGCTCAACTCGATCGGCGAGAGCCAGCCACG
GACATACGCGGAATTCATGACCCTAGCACAAAGGTACATAAGCGCCGAGGAATTGCTGAGGTCCAAACAAGAAGAGAGAGAGGCCGAAGCCGGCAAGAGCAGTCCTCGGC
CAATGGCCGAGGCCGATCGGAGACTAGGGAGCCTCGGGGTCGTGCGGAACCAAAAGCCAGAAAAATTGAGGTCGGATCCAGACAGGAGGAATCGGAACAAATACTGCATG
TTCCACAGAGACCACGGTCACACAACCTGGGAATGCATACAGTTGAGGGACGAGATAGAAGCCCTAATCCGAGAGGGTTACCTCAAGGAGTTTGTGGGGAATGACAGAAG
CTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAAGACGAAGCGTCAAGGTGCCGAGCCTTCACGCTAACACTCACAGGTTTGGCAAGGCAATGGGTGAAAGACTGCTCAACTCGATCGGCGAGAGCCAGCCACG
GACATACGCGGAATTCATGACCCTAGCACAAAGGTACATAAGCGCCGAGGAATTGCTGAGGTCCAAACAAGAAGAGAGAGAGGCCGAAGCCGGCAAGAGCAGTCCTCGGC
CAATGGCCGAGGCCGATCGGAGACTAGGGAGCCTCGGGGTCGTGCGGAACCAAAAGCCAGAAAAATTGAGGTCGGATCCAGACAGGAGGAATCGGAACAAATACTGCATG
TTCCACAGAGACCACGGTCACACAACCTGGGAATGCATACAGTTGAGGGACGAGATAGAAGCCCTAATCCGAGAGGGTTACCTCAAGGAGTTTGTGGGGAATGACAGAAG
CTAG
Protein sequenceShow/hide protein sequence
MAKRRSVKVPSLHANTHRFGKAMGERLLNSIGESQPRTYAEFMTLAQRYISAEELLRSKQEEREAEAGKSSPRPMAEADRRLGSLGVVRNQKPEKLRSDPDRRNRNKYCM
FHRDHGHTTWECIQLRDEIEALIREGYLKEFVGNDRS