; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026383 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026383
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:35843004..35843983
RNA-Seq ExpressionLag0026383
SyntenyLag0026383
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG51528.1 hypothetical protein EZV62_024052 [Acer yangbiense]1.7e-1333.08Show/hide
Query:  EKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGSQVEGYKNLWCL-----------IQYELLLDFYYDCGILG
        +++R+   GPW FD+SL V+  P+   +I+ L F    FWV IH +P+ C N  IA+ L  Q+     L              ++YE L DF Y CG +G
Subjt:  EKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGSQVEGYKNLWCL-----------IQYELLLDFYYDCGILG

Query:  HVSCKC--SNRTSDFVLSSAEQYGGWMRAT
        H   +C       + +  ++ +YG W+RAT
Subjt:  HVSCKC--SNRTSDFVLSSAEQYGGWMRAT

TXG57139.1 hypothetical protein EZV62_018452 [Acer yangbiense]1.5e-1435.71Show/hide
Query:  EKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGSQVEGYK--------NLWCLIQYELLLDFYYDCGILGHVS
        E+NR+   GPW FD SL+ +  P+    ISNL F     W+ IH VP+ C N   A+ + +Q+   K         +   ++YE L +F Y CG +GH S
Subjt:  EKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGSQVEGYK--------NLWCLIQYELLLDFYYDCGILGHVS

Query:  CKCSNR--TSDFVLSSAEQYGGWMRA
          CS+    +  ++S + +YG WMRA
Subjt:  CKCSNR--TSDFVLSSAEQYGGWMRA

TXG57427.1 hypothetical protein EZV62_018740 [Acer yangbiense]1.2e-1437.5Show/hide
Query:  EKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGSQVEGYKNLWCL-IQYELLLDFYYDCGILGHV--SCKCSN
        ++NR+   GPW FDKSL+ +   +   +I+ L F     WV IH VPL C N   A+ L  Q++ + N+  + ++YE LL+F Y CG +GHV   C  + 
Subjt:  EKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGSQVEGYKNLWCL-IQYELLLDFYYDCGILGHV--SCKCSN

Query:  RTSDFVLSSAEQYGGWMRAT
          S  + S+  ++G WMRA+
Subjt:  RTSDFVLSSAEQYGGWMRAT

TXG61366.1 hypothetical protein EZV62_012729 [Acer yangbiense]3.8e-1335.66Show/hide
Query:  EKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLG----------SQVEGYKNLWCLIQYELLLDFYYDCGILGH
        E +++   GPW FDKSLLV+  P+    IS L F     W+ IH VP+ C N   A+ +           S+   Y  +   ++YE L +F Y CG +GH
Subjt:  EKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLG----------SQVEGYKNLWCLIQYELLLDFYYDCGILGH

Query:  VSCKCSN--RTSDFVLSSAEQYGGWMRAT
         S  CS+    S+ + S   +YG WMRA+
Subjt:  VSCKCSN--RTSDFVLSSAEQYGGWMRAT

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]3.5e-1933.97Show/hide
Query:  EKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGS------QVEG-----------------------------
        EK+RVL+ GPW+F+KSLLV+ SP   +Q  ++ F    FW+ IH +P +C +  +A +LG+      ++EG                             
Subjt:  EKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGS------QVEG-----------------------------

Query:  ----YKNLWCLIQYELLLDFYYDCGILGHVSCKCSNRTSDFVLSSAEQYGGWMRAT
             K++WC ++YE L DF Y+CG +GH   +C  R+     +S EQYG W+RAT
Subjt:  ----YKNLWCLIQYELLLDFYYDCGILGHVSCKCSNRTSDFVLSSAEQYGGWMRAT

TrEMBL top hitse value%identityAlignment
A0A2N9G5C3 Uncharacterized protein6.3e-1436.51Show/hide
Query:  RVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGS------QVEGYKNLWCLIQYELLLDFYYDCGILGHVSCKC--
        R+LA  PW+FDK L+++     D Q S + FTH  FW+ I  +P++     +   +G+      +VE  K +W   +YE L  F Y CG+LGH S  C  
Subjt:  RVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGS------QVEGYKNLWCLIQYELLLDFYYDCGILGHVSCKC--

Query:  ---SNRTSDFVLSSAEQYGGWMRATP
            +RT  F     +QYG W+RA P
Subjt:  ---SNRTSDFVLSSAEQYGGWMRATP

A0A5C7H3I8 CCHC-type domain-containing protein8.2e-1433.08Show/hide
Query:  EKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGSQVEGYKNLWCL-----------IQYELLLDFYYDCGILG
        +++R+   GPW FD+SL V+  P+   +I+ L F    FWV IH +P+ C N  IA+ L  Q+     L              ++YE L DF Y CG +G
Subjt:  EKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGSQVEGYKNLWCL-----------IQYELLLDFYYDCGILG

Query:  HVSCKC--SNRTSDFVLSSAEQYGGWMRAT
        H   +C       + +  ++ +YG W+RAT
Subjt:  HVSCKC--SNRTSDFVLSSAEQYGGWMRAT

A0A5C7HK10 CCHC-type domain-containing protein7.4e-1535.71Show/hide
Query:  EKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGSQVEGYK--------NLWCLIQYELLLDFYYDCGILGHVS
        E+NR+   GPW FD SL+ +  P+    ISNL F     W+ IH VP+ C N   A+ + +Q+   K         +   ++YE L +F Y CG +GH S
Subjt:  EKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGSQVEGYK--------NLWCLIQYELLLDFYYDCGILGHVS

Query:  CKCSNR--TSDFVLSSAEQYGGWMRA
          CS+    +  ++S + +YG WMRA
Subjt:  CKCSNR--TSDFVLSSAEQYGGWMRA

A0A5C7HK71 CCHC-type domain-containing protein5.7e-1537.5Show/hide
Query:  EKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGSQVEGYKNLWCL-IQYELLLDFYYDCGILGHV--SCKCSN
        ++NR+   GPW FDKSL+ +   +   +I+ L F     WV IH VPL C N   A+ L  Q++ + N+  + ++YE LL+F Y CG +GHV   C  + 
Subjt:  EKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGSQVEGYKNLWCL-IQYELLLDFYYDCGILGHV--SCKCSN

Query:  RTSDFVLSSAEQYGGWMRAT
          S  + S+  ++G WMRA+
Subjt:  RTSDFVLSSAEQYGGWMRAT

A0A6J1D765 uncharacterized protein LOC1110179021.7e-1933.97Show/hide
Query:  EKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGS------QVEG-----------------------------
        EK+RVL+ GPW+F+KSLLV+ SP   +Q  ++ F    FW+ IH +P +C +  +A +LG+      ++EG                             
Subjt:  EKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGS------QVEG-----------------------------

Query:  ----YKNLWCLIQYELLLDFYYDCGILGHVSCKCSNRTSDFVLSSAEQYGGWMRAT
             K++WC ++YE L DF Y+CG +GH   +C  R+     +S EQYG W+RAT
Subjt:  ----YKNLWCLIQYELLLDFYYDCGILGHVSCKCSNRTSDFVLSSAEQYGGWMRAT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCAACACAACACCATATAATAACAACGTCTTGTTGTTGATTTTATGTCCTGTCAAGTACAGGTTCTCTCTCTACTTGAGAGGCAGTTCTGTTTTGGTCTGGTCTGG
TCAGTGGCTTAGTTTTGAAAAGAATCGAGTTCTTGCTTTGGGTCCTTGGTCTTTTGATAAGTCACTTTTGGTTATGGTCTCGCCGAAAAGGGATTCACAGATTTCTAATT
TGTTGTTTACTCATGAGTTCTTTTGGGTGTATATTCATAAAGTTCCTCTGCAATGTCGCAATGGTCACATAGCTCGTTTACTTGGTTCTCAGGTTGAGGGCTATAAGAAT
TTGTGGTGTCTGATTCAATATGAGCTCCTTCTCGATTTCTATTATGATTGTGGAATTTTGGGTCATGTTTCATGCAAATGTTCTAATCGTACCAGTGATTTTGTTCTTTC
GTCGGCTGAACAATATGGTGGTTGGATGAGGGCCACGCCATTTCTATCTTCTACGGCGCTTGTGGATACTAGAATCTCAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCAACACAACACCATATAATAACAACGTCTTGTTGTTGATTTTATGTCCTGTCAAGTACAGGTTCTCTCTCTACTTGAGAGGCAGTTCTGTTTTGGTCTGGTCTGG
TCAGTGGCTTAGTTTTGAAAAGAATCGAGTTCTTGCTTTGGGTCCTTGGTCTTTTGATAAGTCACTTTTGGTTATGGTCTCGCCGAAAAGGGATTCACAGATTTCTAATT
TGTTGTTTACTCATGAGTTCTTTTGGGTGTATATTCATAAAGTTCCTCTGCAATGTCGCAATGGTCACATAGCTCGTTTACTTGGTTCTCAGGTTGAGGGCTATAAGAAT
TTGTGGTGTCTGATTCAATATGAGCTCCTTCTCGATTTCTATTATGATTGTGGAATTTTGGGTCATGTTTCATGCAAATGTTCTAATCGTACCAGTGATTTTGTTCTTTC
GTCGGCTGAACAATATGGTGGTTGGATGAGGGCCACGCCATTTCTATCTTCTACGGCGCTTGTGGATACTAGAATCTCAGCTTGA
Protein sequenceShow/hide protein sequence
MRNTTPYNNNVLLLILCPVKYRFSLYLRGSSVLVWSGQWLSFEKNRVLALGPWSFDKSLLVMVSPKRDSQISNLLFTHEFFWVYIHKVPLQCRNGHIARLLGSQVEGYKN
LWCLIQYELLLDFYYDCGILGHVSCKCSNRTSDFVLSSAEQYGGWMRATPFLSSTALVDTRISA