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Lag0026390 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026390
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:35941617..35943153
RNA-Seq ExpressionLag0026390
SyntenyLag0026390
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48193.1 hypothetical protein EZV62_027487 [Acer yangbiense]4.9e-2326.77Show/hide
Query:  EAVLKQLADLRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQ-EHTTIECLGYNLFLCKFKNARIKAYILESGPWFYD
        EA + QL +      E A+V  + E+ I   ++ +   ++ K+ T KK+NRE FK ++ +IWNQ     +E +G N F+  F N   +  +   GPW + 
Subjt:  EAVLKQLADLRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQ-EHTTIECLGYNLFLCKFKNARIKAYILESGPWFYD

Query:  RSMLILQEPK-----------------------------------EDCAGEDMDFSS---------LRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTY
        +S+++L++PK                                    +  GE ++  +         +R+KVQ+D+T PLKR + +K  K      + + Y
Subjt:  RSMLILQEPK-----------------------------------EDCAGEDMDFSS---------LRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTY

Query:  EKLPDFCYGCGRLGHIIKECEADSGSQA----DDLPYGPWLREPTKIKITEPLEARNTE--YRPWGWGRGRGRMGGGDRWSWRSTDYFGGGSQRPQKADD
        E+LPDFC+ CGR+GH ++EC  +   +A        +G W+R         P++   T+      G    RGR   G R      +  G GS   +  + 
Subjt:  EKLPDFCYGCGRLGHIIKECEADSGSQA----DDLPYGPWLREPTKIKITEPLEARNTE--YRPWGWGRGRGRMGGGDRWSWRSTDYFGGGSQRPQKADD

Query:  SPTKNQTQSNEGKSIASVAAEKPPT
        +P K+++      S++ VAAEK  T
Subjt:  SPTKNQTQSNEGKSIASVAAEKPPT

TXG51459.1 hypothetical protein EZV62_023983 [Acer yangbiense]5.8e-2431.1Show/hide
Query:  EEAVLKQLADLRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQ-EHTTIECLGYNLFLCKFKNARIKAYILESGPWFY
        E  ++K   +L +   E  ++  + EE     E ++   ++ KI ++K++NRE FKN++ ++W+      IE +G N+F+  F N   +  I + GPW++
Subjt:  EEAVLKQLADLRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQ-EHTTIECLGYNLFLCKFKNARIKAYILESGPWFY

Query:  DRSMLILQEPK----------EDCAGEDMDFSSLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKECEADSGS----QAD
        D+S+++L++P+          +DC G+ M     ++KVQID++ PLKR + +K +K      + + YE+LP FCY CGR+GH  K C  +       + +
Subjt:  DRSMLILQEPK----------EDCAGEDMDFSSLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKECEADSGS----QAD

Query:  DLPYGPWLR
           YG W+R
Subjt:  DLPYGPWLR

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]9.9e-2430.98Show/hide
Query:  LTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQEHTT-IECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLILQEPKEDCAGEDMDFS--------
        LT   +   V+ K+ T+K+I+ E  +++M  +W   ++T  E LG N+++  FK+   K+ +L SGPW +++S+L+L  P       DM+F+        
Subjt:  LTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQEHTT-IECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLILQEPKEDCAGEDMDFS--------

Query:  -------------------------------------SLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKECEADSGSQA
                                              +R++V+IDV+ PL+RG+ +K N  G + W  + YEKLPDFCY CG++GH  +ECE  S    
Subjt:  -------------------------------------SLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKECEADSGSQA

Query:  DDLP--YGPWLREPTKIKITEPLEARNTEYRPWGWGRGRGRMGG-GDRWSWRSTD
         + P  YG WLR  T +K +         +R   +GRG    GG G R  WR  D
Subjt:  DDLP--YGPWLREPTKIKITEPLEARNTEYRPWGWGRGRGRMGG-GDRWSWRSTD

XP_024642377.1 uncharacterized protein LOC112422874 [Medicago truncatula]2.4e-2232.88Show/hide
Query:  EEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQEHTT-IECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLIL------QEPKE-------
        E+ + +  +     ++ KI+T+   N   FK  M + W  ++T  I+ L  NLFL KF + R    IL SGPW +DR++LIL      ++P E       
Subjt:  EEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQEHTT-IECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLIL------QEPKE-------

Query:  ----------------------DCAGEDMDF---------SSLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKECEADS
                              D  G+ ++           S+RIKV ID+ +PLKRG+ +K  K  L  WI   YE+LP+FCY CGR+GH +KECE ++
Subjt:  ----------------------DCAGEDMDF---------SSLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKECEADS

Query:  GSQAD--------DLPYGPWLR
        G   +        D  YG W+R
Subjt:  GSQAD--------DLPYGPWLR

XP_035547259.1 uncharacterized protein LOC118348856 [Juglans regia]2.2e-2332.86Show/hide
Query:  LRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQE-HTTIECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLILQEP
        L ++  EK  + H++   ++    +    ++  + T++  NRE  KNMM K+W        + LG NLFL +F++ R K  IL  GPW +D  +++L++ 
Subjt:  LRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQE-HTTIECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLILQEP

Query:  K----------------EDCAGEDMDFS---SLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKECEADSGSQA---DDL
        +                E+  GE  + +    LRI+V+++++ PL RG+ +K  + G   WI   YE+LP+FCY CG+LGH  K+CE +    A   D L
Subjt:  K----------------EDCAGEDMDFS---SLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKECEADSGSQA---DDL

Query:  PYGPWLREPT
        P+GPWL   T
Subjt:  PYGPWLREPT

TrEMBL top hitse value%identityAlignment
A0A5C7GU64 CCHC-type domain-containing protein2.4e-2326.77Show/hide
Query:  EAVLKQLADLRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQ-EHTTIECLGYNLFLCKFKNARIKAYILESGPWFYD
        EA + QL +      E A+V  + E+ I   ++ +   ++ K+ T KK+NRE FK ++ +IWNQ     +E +G N F+  F N   +  +   GPW + 
Subjt:  EAVLKQLADLRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQ-EHTTIECLGYNLFLCKFKNARIKAYILESGPWFYD

Query:  RSMLILQEPK-----------------------------------EDCAGEDMDFSS---------LRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTY
        +S+++L++PK                                    +  GE ++  +         +R+KVQ+D+T PLKR + +K  K      + + Y
Subjt:  RSMLILQEPK-----------------------------------EDCAGEDMDFSS---------LRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTY

Query:  EKLPDFCYGCGRLGHIIKECEADSGSQA----DDLPYGPWLREPTKIKITEPLEARNTE--YRPWGWGRGRGRMGGGDRWSWRSTDYFGGGSQRPQKADD
        E+LPDFC+ CGR+GH ++EC  +   +A        +G W+R         P++   T+      G    RGR   G R      +  G GS   +  + 
Subjt:  EKLPDFCYGCGRLGHIIKECEADSGSQA----DDLPYGPWLREPTKIKITEPLEARNTE--YRPWGWGRGRGRMGGGDRWSWRSTDYFGGGSQRPQKADD

Query:  SPTKNQTQSNEGKSIASVAAEKPPT
        +P K+++      S++ VAAEK  T
Subjt:  SPTKNQTQSNEGKSIASVAAEKPPT

A0A5C7H421 CCHC-type domain-containing protein2.8e-2431.1Show/hide
Query:  EEAVLKQLADLRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQ-EHTTIECLGYNLFLCKFKNARIKAYILESGPWFY
        E  ++K   +L +   E  ++  + EE     E ++   ++ KI ++K++NRE FKN++ ++W+      IE +G N+F+  F N   +  I + GPW++
Subjt:  EEAVLKQLADLRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQ-EHTTIECLGYNLFLCKFKNARIKAYILESGPWFY

Query:  DRSMLILQEPK----------EDCAGEDMDFSSLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKECEADSGS----QAD
        D+S+++L++P+          +DC G+ M     ++KVQID++ PLKR + +K +K      + + YE+LP FCY CGR+GH  K C  +       + +
Subjt:  DRSMLILQEPK----------EDCAGEDMDFSSLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKECEADSGS----QAD

Query:  DLPYGPWLR
           YG W+R
Subjt:  DLPYGPWLR

A0A5C7IV71 CCHC-type domain-containing protein7.6e-2230.45Show/hide
Query:  EEAVLKQLADL--RVTPAEKASVFH-LQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQ-EHTTIECLGYNLFLCKFKNARIKAYILESGP
        E A   +LA L   ++  ++  V H + EE   + E+ + + ++ K+ + K++N++ FK+++  +WN   +  IE +G N+FL  F N+  +  +   GP
Subjt:  EEAVLKQLADL--RVTPAEKASVFH-LQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQ-EHTTIECLGYNLFLCKFKNARIKAYILESGP

Query:  WFYDRSMLILQEP------------------KEDCAGEDMDFSSLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKEC--
        W +D+ +L+L++P                    DC G+      LR+KV+ID++ PLKR + +  ++ G    + + YE+LP+FCY CGR+GH I EC  
Subjt:  WFYDRSMLILQEP------------------KEDCAGEDMDFSSLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKEC--

Query:  -EADSGSQADDLP-YGPWLR
         EA   +   + P +G W+R
Subjt:  -EADSGSQADDLP-YGPWLR

A0A6J1D765 uncharacterized protein LOC1110179024.8e-2430.98Show/hide
Query:  LTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQEHTT-IECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLILQEPKEDCAGEDMDFS--------
        LT   +   V+ K+ T+K+I+ E  +++M  +W   ++T  E LG N+++  FK+   K+ +L SGPW +++S+L+L  P       DM+F+        
Subjt:  LTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQEHTT-IECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLILQEPKEDCAGEDMDFS--------

Query:  -------------------------------------SLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKECEADSGSQA
                                              +R++V+IDV+ PL+RG+ +K N  G + W  + YEKLPDFCY CG++GH  +ECE  S    
Subjt:  -------------------------------------SLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKECEADSGSQA

Query:  DDLP--YGPWLREPTKIKITEPLEARNTEYRPWGWGRGRGRMGG-GDRWSWRSTD
         + P  YG WLR  T +K +         +R   +GRG    GG G R  WR  D
Subjt:  DDLP--YGPWLREPTKIKITEPLEARNTEYRPWGWGRGRGRMGG-GDRWSWRSTD

A0A6P9EID8 uncharacterized protein LOC1183488561.1e-2332.86Show/hide
Query:  LRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQE-HTTIECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLILQEP
        L ++  EK  + H++   ++    +    ++  + T++  NRE  KNMM K+W        + LG NLFL +F++ R K  IL  GPW +D  +++L++ 
Subjt:  LRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQE-HTTIECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLILQEP

Query:  K----------------EDCAGEDMDFS---SLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKECEADSGSQA---DDL
        +                E+  GE  + +    LRI+V+++++ PL RG+ +K  + G   WI   YE+LP+FCY CG+LGH  K+CE +    A   D L
Subjt:  K----------------EDCAGEDMDFS---SLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKECEADSGSQA---DDL

Query:  PYGPWLREPT
        P+GPWL   T
Subjt:  PYGPWLREPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding1.7e-0527.12Show/hide
Query:  LQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQEHTTIECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLILQEPKEDCAGEDMDFSSL
        +QEEAI+L       + LC     +K N    +N  PK  ++E      L  +     F++      IL  GPW ++  M ++Q   +     D +F  +
Subjt:  LQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQEHTTIECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLILQEPKEDCAGEDMDFSSL

Query:  RIKVQID-----------VTDPLKR-GVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKEC--EADSGSQADD
           +QI            +T   +R G+F+++N       +   YEKL +FC  CG L H   EC    + G  ADD
Subjt:  RIKVQID-----------VTDPLKR-GVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKEC--EADSGSQADD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACCGACAATGAAGAGGAAGCGGTTCTGAAGCAATTAGCAGATCTGAGAGTCACTCCAGCTGAAAAAGCAAGTGTTTTTCATCTGCAAGAGGAGGCAATTGATTT
GACAGAGAAGAAGTTAGCAAATGTGGTGTTGTGCAAGATTTTTACAAACAAGAAAATCAACCGGGAGATCTTTAAAAATATGATGCCAAAAATATGGAATCAAGAACATA
CCACGATTGAATGCCTGGGTTACAATCTCTTCTTGTGCAAGTTCAAGAACGCACGTATCAAAGCTTATATCCTGGAATCTGGACCATGGTTTTATGATAGGTCTATGCTT
ATCCTACAAGAGCCCAAAGAAGATTGTGCCGGAGAGGACATGGATTTCAGTTCGTTACGAATTAAAGTTCAAATTGATGTTACAGATCCATTGAAAAGAGGAGTGTTTAT
GAAATCGAATAAAATAGGTCTTGAGAAATGGATTGTTGTTACTTATGAAAAACTTCCTGACTTTTGCTACGGATGTGGAAGATTAGGACACATAATCAAGGAGTGCGAAG
CTGATAGTGGTTCACAAGCAGATGATCTCCCATATGGGCCATGGCTTAGAGAACCCACCAAGATAAAAATTACAGAACCTTTAGAAGCGAGAAACACTGAATATAGACCT
TGGGGATGGGGTAGAGGAAGAGGAAGGATGGGTGGTGGAGATAGATGGAGCTGGAGAAGTACTGATTATTTTGGTGGAGGATCACAGAGGCCTCAAAAAGCTGATGATAG
TCCAACCAAAAACCAAACACAATCAAATGAGGGGAAATCGATAGCTTCTGTAGCGGCGGAGAAACCACCGACGAAGGTGGACGGCGAGAGTAGTGGTGGAGGTCTGACGA
GGGATGATTCGTTGACTTGTCCAACAAGAGTGCACACTGACGACAGCGGAAGCATTGATAGCAGGGTGACAATCGGTGGAAAACATAAAATTGAATTTGCAGAGGACGGT
CTAGGTAAAAGGAGAGTAGTGATGACAGCGGAGGATCCAATTAAAATTGCAAGATTGATGGAGGCTGCGGGACAGCCCCGCCGGGCACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTACCGACAATGAAGAGGAAGCGGTTCTGAAGCAATTAGCAGATCTGAGAGTCACTCCAGCTGAAAAAGCAAGTGTTTTTCATCTGCAAGAGGAGGCAATTGATTT
GACAGAGAAGAAGTTAGCAAATGTGGTGTTGTGCAAGATTTTTACAAACAAGAAAATCAACCGGGAGATCTTTAAAAATATGATGCCAAAAATATGGAATCAAGAACATA
CCACGATTGAATGCCTGGGTTACAATCTCTTCTTGTGCAAGTTCAAGAACGCACGTATCAAAGCTTATATCCTGGAATCTGGACCATGGTTTTATGATAGGTCTATGCTT
ATCCTACAAGAGCCCAAAGAAGATTGTGCCGGAGAGGACATGGATTTCAGTTCGTTACGAATTAAAGTTCAAATTGATGTTACAGATCCATTGAAAAGAGGAGTGTTTAT
GAAATCGAATAAAATAGGTCTTGAGAAATGGATTGTTGTTACTTATGAAAAACTTCCTGACTTTTGCTACGGATGTGGAAGATTAGGACACATAATCAAGGAGTGCGAAG
CTGATAGTGGTTCACAAGCAGATGATCTCCCATATGGGCCATGGCTTAGAGAACCCACCAAGATAAAAATTACAGAACCTTTAGAAGCGAGAAACACTGAATATAGACCT
TGGGGATGGGGTAGAGGAAGAGGAAGGATGGGTGGTGGAGATAGATGGAGCTGGAGAAGTACTGATTATTTTGGTGGAGGATCACAGAGGCCTCAAAAAGCTGATGATAG
TCCAACCAAAAACCAAACACAATCAAATGAGGGGAAATCGATAGCTTCTGTAGCGGCGGAGAAACCACCGACGAAGGTGGACGGCGAGAGTAGTGGTGGAGGTCTGACGA
GGGATGATTCGTTGACTTGTCCAACAAGAGTGCACACTGACGACAGCGGAAGCATTGATAGCAGGGTGACAATCGGTGGAAAACATAAAATTGAATTTGCAGAGGACGGT
CTAGGTAAAAGGAGAGTAGTGATGACAGCGGAGGATCCAATTAAAATTGCAAGATTGATGGAGGCTGCGGGACAGCCCCGCCGGGCACAATGA
Protein sequenceShow/hide protein sequence
MTTDNEEEAVLKQLADLRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQEHTTIECLGYNLFLCKFKNARIKAYILESGPWFYDRSML
ILQEPKEDCAGEDMDFSSLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKECEADSGSQADDLPYGPWLREPTKIKITEPLEARNTEYRP
WGWGRGRGRMGGGDRWSWRSTDYFGGGSQRPQKADDSPTKNQTQSNEGKSIASVAAEKPPTKVDGESSGGGLTRDDSLTCPTRVHTDDSGSIDSRVTIGGKHKIEFAEDG
LGKRRVVMTAEDPIKIARLMEAAGQPRRAQ