; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026391 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026391
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:35979039..35979833
RNA-Seq ExpressionLag0026391
SyntenyLag0026391
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4273082.1 unnamed protein product [Prunus armeniaca]7.7e-3433.75Show/hide
Query:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTT---------EGSRGEGHRGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRR
        P + + +  IPISR    +K VWHYT+ G Y+V+SGY  A+ +            E S+G+  R  +WK IW L    K++ F+W+ C+N L V ENL  
Subjt:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTT---------EGSRGEGHRGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRR

Query:  RSLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQS
        R +  +    +C +E E+  HV  +C+ A+  WF SP+QLD     G DF+  WE L +   +V+     L   AFGLW+IWK RN + FEG  ++   +
Subjt:  RSLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQS

Query:  LRIVHKEVREYWESVVPAGSHGGGEVYGNNEVPDMRAQNI
        +     +V E+      A  HG   +      P+++A+ +
Subjt:  LRIVHKEVREYWESVVPAGSHGGGEVYGNNEVPDMRAQNI

CAB4274760.1 unnamed protein product [Prunus armeniaca]6.3e-3636.67Show/hide
Query:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTTE--GSRGEGH------RGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRR
        P++   +  IPISR    +K +WH+   G Y+V+SGY  A+ +      G +G G       +  VWK +W +    K+K F+W  C N L V  NL RR
Subjt:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTTE--GSRGEGH------RGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRR

Query:  SLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSL
         +   G  G C  + ET  H+  ECD A+AFWF SPLQLD S   G DF+ +W+ +   L   +     + +  FGLW+IWK RN + F+G Q D  + +
Subjt:  SLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSL

Query:  RIVHKEVREY
         ++ K+V E+
Subjt:  RIVHKEVREY

CAB4274761.1 unnamed protein product [Prunus armeniaca]6.3e-3636.67Show/hide
Query:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTTE--GSRGEGH------RGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRR
        P++   +  IPISR    +K +WH+   G Y+V+SGY  A+ +      G +G G       +  VWK +W +    K+K F+W  C N L V  NL RR
Subjt:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTTE--GSRGEGH------RGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRR

Query:  SLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSL
         +   G  G C  + ET  H+  ECD A+AFWF SPLQLD S   G DF+ +W+ +   L   +     + +  FGLW+IWK RN + F+G Q D  + +
Subjt:  SLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSL

Query:  RIVHKEVREY
         ++ K+V E+
Subjt:  RIVHKEVREY

CAB4303756.1 unnamed protein product [Prunus armeniaca]8.8e-3837.14Show/hide
Query:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTTE--GSRGEGH------RGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRR
        P++   +  IPISR    +K +WH++  G Y+V+SGY  A+ +      G +G G       +  VWK +W +    K+K F+W+ C N L V  NLRRR
Subjt:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTTE--GSRGEGH------RGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRR

Query:  SLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSL
         +   G  G C  + ET  H+  ECD A+AFWF SPLQLD S   G DF+ +W+ +   L   +     + +  FGLW+IWK RN + F+G Q D  +++
Subjt:  SLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSL

Query:  RIVHKEVREY
         ++ K+V E+
Subjt:  RIVHKEVREY

CAB4321714.1 unnamed protein product [Prunus armeniaca]1.3e-3636.67Show/hide
Query:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTTE--GSRGEGH------RGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRR
        P++   +  I ISR    +K +WH++  G+Y+V+SGY  A+ +      G +G G       +  VWK +W +    K+K F+W+ C N L V  NL RR
Subjt:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTTE--GSRGEGH------RGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRR

Query:  SLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSL
        S+   G  G C  + ET  H+  ECD A+AFWF SPLQLD S   G DF+ +W+ +   L   +     + +  FGLW+IWK RN + F+G Q D  +++
Subjt:  SLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSL

Query:  RIVHKEVREY
         ++ K+V E+
Subjt:  RIVHKEVREY

TrEMBL top hitse value%identityAlignment
A0A6J5UAY2 Reverse transcriptase domain-containing protein3.7e-3433.75Show/hide
Query:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTT---------EGSRGEGHRGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRR
        P + + +  IPISR    +K VWHYT+ G Y+V+SGY  A+ +            E S+G+  R  +WK IW L    K++ F+W+ C+N L V ENL  
Subjt:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTT---------EGSRGEGHRGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRR

Query:  RSLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQS
        R +  +    +C +E E+  HV  +C+ A+  WF SP+QLD     G DF+  WE L +   +V+     L   AFGLW+IWK RN + FEG  ++   +
Subjt:  RSLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQS

Query:  LRIVHKEVREYWESVVPAGSHGGGEVYGNNEVPDMRAQNI
        +     +V E+      A  HG   +      P+++A+ +
Subjt:  LRIVHKEVREYWESVVPAGSHGGGEVYGNNEVPDMRAQNI

A0A6J5UE59 Reverse transcriptase domain-containing protein3.1e-3636.67Show/hide
Query:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTTE--GSRGEGH------RGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRR
        P++   +  IPISR    +K +WH+   G Y+V+SGY  A+ +      G +G G       +  VWK +W +    K+K F+W  C N L V  NL RR
Subjt:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTTE--GSRGEGH------RGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRR

Query:  SLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSL
         +   G  G C  + ET  H+  ECD A+AFWF SPLQLD S   G DF+ +W+ +   L   +     + +  FGLW+IWK RN + F+G Q D  + +
Subjt:  SLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSL

Query:  RIVHKEVREY
         ++ K+V E+
Subjt:  RIVHKEVREY

A0A6J5UF50 Uncharacterized protein3.1e-3636.67Show/hide
Query:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTTE--GSRGEGH------RGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRR
        P++   +  IPISR    +K +WH+   G Y+V+SGY  A+ +      G +G G       +  VWK +W +    K+K F+W  C N L V  NL RR
Subjt:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTTE--GSRGEGH------RGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRR

Query:  SLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSL
         +   G  G C  + ET  H+  ECD A+AFWF SPLQLD S   G DF+ +W+ +   L   +     + +  FGLW+IWK RN + F+G Q D  + +
Subjt:  SLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSL

Query:  RIVHKEVREY
         ++ K+V E+
Subjt:  RIVHKEVREY

A0A6J5WPU6 Reverse transcriptase domain-containing protein4.3e-3837.14Show/hide
Query:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTTE--GSRGEGH------RGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRR
        P++   +  IPISR    +K +WH++  G Y+V+SGY  A+ +      G +G G       +  VWK +W +    K+K F+W+ C N L V  NLRRR
Subjt:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTTE--GSRGEGH------RGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRR

Query:  SLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSL
         +   G  G C  + ET  H+  ECD A+AFWF SPLQLD S   G DF+ +W+ +   L   +     + +  FGLW+IWK RN + F+G Q D  +++
Subjt:  SLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSL

Query:  RIVHKEVREY
         ++ K+V E+
Subjt:  RIVHKEVREY

A0A6J5YDN0 Uncharacterized protein6.2e-3736.67Show/hide
Query:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTTE--GSRGEGH------RGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRR
        P++   +  I ISR    +K +WH++  G+Y+V+SGY  A+ +      G +G G       +  VWK +W +    K+K F+W+ C N L V  NL RR
Subjt:  PKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTTE--GSRGEGH------RGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRR

Query:  SLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSL
        S+   G  G C  + ET  H+  ECD A+AFWF SPLQLD S   G DF+ +W+ +   L   +     + +  FGLW+IWK RN + F+G Q D  +++
Subjt:  SLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSL

Query:  RIVHKEVREY
         ++ K+V E+
Subjt:  RIVHKEVREY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-1030.2Show/hide
Query:  CNRERETVNHVLLECDSAQAFWFGSPL------QLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSLRIVH
        C   RETVNH+L +C  A+  W  SP+      +   S+Y  L +V + E+    L K+ +         + LW++WK RNE  F+GK+ D  + LR   
Subjt:  CNRERETVNHVLLECDSAQAFWFGSPL------QLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSLRIVH

Query:  KEVREYWESVVPAGSHGGGEVYGNNEV----PDMRAQNINILWTDAAWE
        ++  E+       G   G +V  N  V    P  +    N   TDA W+
Subjt:  KEVREYWESVVPAGSHGGGEVYGNNEV----PDMRAQNINILWTDAAWE

AT3G09510.1 Ribonuclease H-like superfamily protein3.1e-1729.09Show/hide
Query:  NKGVWHYTNSGEYSVKSGYLSAMRMHTTEGSRGEGHRGCV--WKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRRSLKEDGLYGVCNRERETVNHVLLE
        +K +W+Y  +GEY+V+SGY       +T         G +     IW LP + K+KHF+W+A    L   E L  R ++ D     C+RE E++NH L  
Subjt:  NKGVWHYTNSGEYSVKSGYLSAMRMHTTEGSRGEGHRGCV--WKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRRSLKEDGLYGVCNRERETVNHVLLE

Query:  CDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTF
        C  A   W  S   L  +     DF  +   +   +              + +W+IWK RN   F
Subjt:  CDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTF

AT3G25270.1 Ribonuclease H-like superfamily protein2.0e-1629.17Show/hide
Query:  EIWKLPCIQKVKHFVWQACKNFLVVNENLRRRSLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGR
        +IWKL    K+KHF+W+     L   +NL+RR ++       C +E ET  H+  +C  AQ  W  S +        G+      E+L  + L  + + +
Subjt:  EIWKLPCIQKVKHFVWQACKNFLVVNENLRRRSLKEDGLYGVCNRERETVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGR

Query:  GLCFAAFGLWKIWKGRNESTFEGKQVDVEQSLRIVHKEVREYWE
            A + LW++WK RN+  F+ K +  + +L+    +V+E WE
Subjt:  GLCFAAFGLWKIWKGRNESTFEGKQVDVEQSLRIVHKEVREYWE

AT4G29090.1 Ribonuclease H-like superfamily protein9.8e-1928.06Show/hide
Query:  WHYTNSGEYSVKSGY---LSAMRMHTTEGSRGEGHRGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRRSLKEDGLYGVCNRERETVNHVLLECDS
        W YT+SG+Y+VKSGY      +   ++     E     ++++IWK     K++HF+W+   N L V   L  R L ++     C   +ETVNH+L +C  
Subjt:  WHYTNSGEYSVKSGY---LSAMRMHTTEGSRGEGHRGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRRSLKEDGLYGVCNRERETVNHVLLECDS

Query:  AQAFWFGSPLQLD------TSIYRGLDFVCS-------WEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSLRIVHKEVREY
        A+  W  S + +        SIY  L +V +       WE   +                + LW++WK RNE  F G++ + ++ LR    ++ E+
Subjt:  AQAFWFGSPLQLD------TSIYRGLDFVCS-------WEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSLRIVHKEVREY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCCGAAGGATGTGGAGCTAGTAAGAGTAATTCCTATTAGCAGGCGGTGTATGCATAACAAGGGAGTGTGGCATTACACCAATTCGGGAGAATATTCTGTAAAATC
AGGATATTTGTCAGCAATGAGAATGCATACTACAGAAGGATCTAGAGGAGAAGGCCATAGGGGTTGCGTATGGAAGGAAATTTGGAAGTTGCCTTGCATACAGAAGGTTA
AACACTTCGTGTGGCAAGCTTGCAAAAACTTTTTGGTCGTCAACGAGAATTTGAGAAGAAGAAGTTTAAAAGAGGATGGACTATATGGTGTTTGCAACCGAGAAAGGGAG
ACAGTCAACCACGTTCTGCTGGAGTGTGATTCGGCCCAAGCTTTCTGGTTTGGATCTCCTCTCCAACTTGATACTAGTATATATAGAGGGCTGGATTTTGTATGCAGCTG
GGAAATGTTGAGAGAGGCATTATTGAAGGTGGACAGCGAGGGGAGGGGGTTGTGTTTTGCTGCTTTTGGCTTGTGGAAGATATGGAAAGGCAGGAATGAGAGTACCTTCG
AAGGGAAGCAGGTTGATGTGGAACAAAGCCTTAGGATCGTACATAAGGAGGTGAGGGAGTATTGGGAAAGTGTAGTACCAGCTGGAAGTCATGGGGGGGGGGAGGTGTAT
GGGAATAATGAGGTGCCTGACATGCGCGCACAGAACATTAACATCTTGTGGACGGATGCTGCGTGGGAGGCGGGTTCTCTAGCCATGCCACAGGGTTTGGCTGGGCTATT
GACAGACAAGATGATGCATGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCCGAAGGATGTGGAGCTAGTAAGAGTAATTCCTATTAGCAGGCGGTGTATGCATAACAAGGGAGTGTGGCATTACACCAATTCGGGAGAATATTCTGTAAAATC
AGGATATTTGTCAGCAATGAGAATGCATACTACAGAAGGATCTAGAGGAGAAGGCCATAGGGGTTGCGTATGGAAGGAAATTTGGAAGTTGCCTTGCATACAGAAGGTTA
AACACTTCGTGTGGCAAGCTTGCAAAAACTTTTTGGTCGTCAACGAGAATTTGAGAAGAAGAAGTTTAAAAGAGGATGGACTATATGGTGTTTGCAACCGAGAAAGGGAG
ACAGTCAACCACGTTCTGCTGGAGTGTGATTCGGCCCAAGCTTTCTGGTTTGGATCTCCTCTCCAACTTGATACTAGTATATATAGAGGGCTGGATTTTGTATGCAGCTG
GGAAATGTTGAGAGAGGCATTATTGAAGGTGGACAGCGAGGGGAGGGGGTTGTGTTTTGCTGCTTTTGGCTTGTGGAAGATATGGAAAGGCAGGAATGAGAGTACCTTCG
AAGGGAAGCAGGTTGATGTGGAACAAAGCCTTAGGATCGTACATAAGGAGGTGAGGGAGTATTGGGAAAGTGTAGTACCAGCTGGAAGTCATGGGGGGGGGGAGGTGTAT
GGGAATAATGAGGTGCCTGACATGCGCGCACAGAACATTAACATCTTGTGGACGGATGCTGCGTGGGAGGCGGGTTCTCTAGCCATGCCACAGGGTTTGGCTGGGCTATT
GACAGACAAGATGATGCATGGGTGA
Protein sequenceShow/hide protein sequence
MFPKDVELVRVIPISRRCMHNKGVWHYTNSGEYSVKSGYLSAMRMHTTEGSRGEGHRGCVWKEIWKLPCIQKVKHFVWQACKNFLVVNENLRRRSLKEDGLYGVCNRERE
TVNHVLLECDSAQAFWFGSPLQLDTSIYRGLDFVCSWEMLREALLKVDSEGRGLCFAAFGLWKIWKGRNESTFEGKQVDVEQSLRIVHKEVREYWESVVPAGSHGGGEVY
GNNEVPDMRAQNINILWTDAAWEAGSLAMPQGLAGLLTDKMMHG