CuGenDBv2

Gene ID	Lag0026399
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	chr10:36106587..36109914
RNA-Seq Expression	Lag0026399
Synteny	Lag0026399
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR002156 - Ribonuclease H domain IPR005162 - Retrotransposon gag domain IPR026960 - Reverse transcriptase zinc-binding domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

CAB4263564.1 unnamed protein product [Prunus armeniaca]

1.2e-77

33.06

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Query:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPN
        I+PSRGLRQGDP+SPYLFL+ AE  S LL+ A+R S + G  +A + P ++HL FADDSLLF  A   E+  +  +  +Y  +SGQ +N  KS + F+P+
Subjt:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPN

Query:  TGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ-------------RPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFW
        T    +  + Q+L V   PCH +Y GLP+ + +++    + ++D+                GKEVL+KS+ QAIP Y+M+ FRLP  L  EI  ++A FW
Subjt:  TGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ-------------RPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFW

Query:  WDILEGEKKIHWR----------------------------------------------------------------------SLLWGRELLARGCRWRI
        W   +G + IHW+                                                                      SLLWGR+LL  G RWRI
Subjt:  WDILEGEKKIHWR----------------------------------------------------------------------SLLWGRELLARGCRWRI

Query:  GNGSSVPIYFSNWLPNEFSLQIHFFPSLPLTSCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLA------
        G+G  V IY   W+P +    I   P+LP+TS + DLFT+SG W+  K+   F+    EAIL IPL    + D+ IW+F KN  YSVKSGY  A      
Subjt:  GNGSSVPIYFSNWLPNEFSLQIHFFPSLPLTSCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLA------

Query:  HSLSVRDQASSSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLATKDNLLKR---------GMDISNLCVLCHVPLVGLQQ------VPSGR----AY
          LS    A  S+S+L    W  LWK+ VP KI    WR++ + L +K+ L +R          +D  +  +L  +  VG         +P  +    A+
Subjt:  HSLSVRDQASSSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLATKDNLLKR---------GMDISNLCVLCHVPLVGLQQ------VPSGR----AY

Query:  VV----------WVPPPMNELKLNVDAVVRPETGATCGGFVLRNERREVLLSGCEFLPNCWSVDLVEGWAMLKGILIARQMGLFSFHVETDSMRLSKVLT
         V          W PP  N  KLNVD     ETGA   G ++R+   +++ +     P+  SV   E +A+  GI  A  M      +E+DS++   ++ 
Subjt:  VV----------WVPPPMNELKLNVDAVVRPETGATCGGFVLRNERREVLLSGCEFLPNCWSVDLVEGWAMLKGILIARQMGLFSFHVETDSMRLSKVLT

Query:  DD
         +
Subjt:  DD

ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]

2.6e-77

36.29

Show/hide

Query:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPN
        I+P RGLRQG PLSPYLFL+C EG SCLLRGA+RR  + G ++AR  P V+HLLFADDS+LF +A   +   +  L   Y   +GQ INY KS ++ +PN
Subjt:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPN

Query:  TGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ-------------RPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFW
                +  VL V    CH  Y GLP+   + R    + ++D+                GKE+L+K+++QAIP Y+M+ FR+PK L  E++ +MA FW
Subjt:  TGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ-------------RPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFW

Query:  WDILEGEKKIH----------------------------------------------------------------------WRSLLWGRELLARGCRWRI
        W   + ++ IH                                                                      WRSL WG+ELL +G RWR+
Subjt:  WDILEGEKKIH----------------------------------------------------------------------WRSLLWGRELLARGCRWRI

Query:  GNGSSVPIYFSNWLPNEFSLQIHFFPSLPLTSCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLAHSLSVR
        G+G S+ +Y   WLP     +I   P LPL++ + DLFTSSG WN   ++  F     +AIL+IPL +L+  D  IWH+E+N +YSVKSGYRLA     +
Subjt:  GNGSSVPIYFSNWLPNEFSLQIHFFPSLPLTSCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLAHSLSVR

Query:  DQAS---SSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLATKDNLLKRGMDISNLCVLCH
        D+ S   S+   L   +W  +W + +P+KIKFF WR + + L     L  R +  + +C  CH
Subjt:  DQAS---SSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLATKDNLLKRGMDISNLCVLCH

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]

5.8e-77

36.5

Show/hide

Query:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPN
        I+P RGLRQG PLSPYLFL+C EG SCLLRGA+RR  + G ++AR  P V+HLLFADDS+LF +A       +  L   Y   SGQ INY KS  + +PN
Subjt:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPN

Query:  TGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ-------------RPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFW
                +  VL V    CH +Y GLP+   + R    + ++D+                GKE+L+K+++QAIP Y+M+ FR+PK L  E++ +MA FW
Subjt:  TGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ-------------RPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFW

Query:  WDILEGEKKIH----------------------------------------------------------------------WRSLLWGRELLARGCRWRI
        W   + ++ IH                                                                      WRSL WG+ELL +G RWR+
Subjt:  WDILEGEKKIH----------------------------------------------------------------------WRSLLWGRELLARGCRWRI

Query:  GNGSSVPIYFSNWLPNEFSLQIHFFPSLPLTSCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLAHSLSVR
        GNG S+ +Y   WLP     +I   P LPL++ + DLFTSSG WN   ++  F     +A L+IPL +L+  D  IWH+E+N +YSVKSGYRLA     +
Subjt:  GNGSSVPIYFSNWLPNEFSLQIHFFPSLPLTSCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLAHSLSVR

Query:  DQASSSNST---LWQGWWSSLWKMNVPSKIKFFFWRLSLNRLATKDNLLKRGMDISNLCVLCH
        D+ S   S    L   +W  +W + +P+KIKFF WR + + L     L  R +  + +C  CH
Subjt:  DQASSSNST---LWQGWWSSLWKMNVPSKIKFFFWRLSLNRLATKDNLLKRGMDISNLCVLCH

XP_030487384.1 uncharacterized protein LOC115704310 [Cannabis sativa]

7.6e-77

37.56

Show/hide

Query:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPN
        + P RGLRQGDPLSP+LFLLCAE  S L++ A++R  + G    R    VSHL FADDSL+F  A   E  +  +LL  Y  +SGQ +N+ KS + F  N
Subjt:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPN

Query:  TGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ---RPRG----------KEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFW
             +  ++ ++ V     + +Y GLPSF+ R +    +FI+++   + +G          KEVL+K+IVQAIP YTM+ FRLPK  I  IH + A FW
Subjt:  TGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ---RPRG----------KEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFW

Query:  WDILEGEKKIH-----------------------------WRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQIHFFPSLPLTSCIRDLFTSS
        W   E + KIH                             WRSL+WG++++ +G RWRIGN +SV +   +WLP   + +I+  P LP    + DL    
Subjt:  WDILEGEKKIH-----------------------------WRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQIHFFPSLPLTSCIRDLFTSS

Query:  GNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLAHSLSVRDQASSSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLAT
        G W++E +R  F  T  + IL +P      ED+ +WH+ K+  YSV+SGYR+A +L VRD  S + +T  + WW  LWK+ +P K+K F W+++ + + T
Subjt:  GNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLAHSLSVRDQASSSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLAT

Query:  KDNLLKRGMDISNLCVLC
           L  R + +   C  C
Subjt:  KDNLLKRGMDISNLCVLC

XP_030498122.1 uncharacterized protein LOC115713779 [Cannabis sativa]

3.8e-76

33.52

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Query:  PSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPNTG
        PSRG+RQGDPLSPYLFL+CAEGLS LL+  +    + G R++RT P VSHL FADDS+LF RAN   +  I  +L +Y  +SGQ +N DK V++F+PNT 
Subjt:  PSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPNTG

Query:  DDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ-------------RPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFWWD
           + Y  Q+L +  +PCH +Y GLPSF  R+++     I D+                GKEVLLK++VQAIP Y M+ FRLP  L  +I  +MANFWW 
Subjt:  DDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ-------------RPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFWWD

Query:  ILEGEKKIH----------------------------------------------------------------------WRSLLWGRELLARGCRWRIGN
               IH                                                                      WRS++WG+ELL +G RWR+G 
Subjt:  ILEGEKKIH----------------------------------------------------------------------WRSLLWGRELLARGCRWRIGN

Query:  GSSVPIYFSNWLPNEFSLQIHFFPSLPLTSCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLAHSLSVRDQ
        G+ +      WLP         F     +  + DL  S   W+   +  +F     + IL IPL      D  IW+      YSVKSGY  A+SL+ +  
Subjt:  GSSVPIYFSNWLPNEFSLQIHFFPSLPLTSCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLAHSLSVRDQ

Query:  ASSSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLATKDNLLKRGMDISNLCVLCHVPLVGLQQV--PSGRAYVVWVPPPMNELKLNVDAVVRPETGA
          SSN+  ++ WWS  WK+ +PSK++ F W++  N L     L +R +  S  C LC +    +        RA  VW    ++ L LN     +    +
Subjt:  ASSSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLATKDNLLKRGMDISNLCVLCHVPLVGLQQV--PSGRAYVVWVPPPMNELKLNVDAVVRPETGA

Query:  TCGGFVLRNERREVLLSGCEFLPNCWSV
        +   F+L        L   +FL  CWS+
Subjt:  TCGGFVLRNERREVLLSGCEFLPNCWSV

TrEMBL top hits

e value

%identity

Alignment

A0A251NPF0 Reverse transcriptase domain-containing protein

1.3e-77

36.29

Show/hide

Query:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPN
        I+P RGLRQG PLSPYLFL+C EG SCLLRGA+RR  + G ++AR  P V+HLLFADDS+LF +A   +   +  L   Y   +GQ INY KS ++ +PN
Subjt:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPN

Query:  TGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ-------------RPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFW
                +  VL V    CH  Y GLP+   + R    + ++D+                GKE+L+K+++QAIP Y+M+ FR+PK L  E++ +MA FW
Subjt:  TGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ-------------RPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFW

Query:  WDILEGEKKIH----------------------------------------------------------------------WRSLLWGRELLARGCRWRI
        W   + ++ IH                                                                      WRSL WG+ELL +G RWR+
Subjt:  WDILEGEKKIH----------------------------------------------------------------------WRSLLWGRELLARGCRWRI

Query:  GNGSSVPIYFSNWLPNEFSLQIHFFPSLPLTSCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLAHSLSVR
        G+G S+ +Y   WLP     +I   P LPL++ + DLFTSSG WN   ++  F     +AIL+IPL +L+  D  IWH+E+N +YSVKSGYRLA     +
Subjt:  GNGSSVPIYFSNWLPNEFSLQIHFFPSLPLTSCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLAHSLSVR

Query:  DQAS---SSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLATKDNLLKRGMDISNLCVLCH
        D+ S   S+   L   +W  +W + +P+KIKFF WR + + L     L  R +  + +C  CH
Subjt:  DQAS---SSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLATKDNLLKRGMDISNLCVLCH

A0A6J5TIF9 Reverse transcriptase domain-containing protein

5.7e-78

33.06

Show/hide

Query:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPN
        I+PSRGLRQGDP+SPYLFL+ AE  S LL+ A+R S + G  +A + P ++HL FADDSLLF  A   E+  +  +  +Y  +SGQ +N  KS + F+P+
Subjt:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPN

Query:  TGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ-------------RPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFW
        T    +  + Q+L V   PCH +Y GLP+ + +++    + ++D+                GKEVL+KS+ QAIP Y+M+ FRLP  L  EI  ++A FW
Subjt:  TGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ-------------RPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFW

Query:  WDILEGEKKIHWR----------------------------------------------------------------------SLLWGRELLARGCRWRI
        W   +G + IHW+                                                                      SLLWGR+LL  G RWRI
Subjt:  WDILEGEKKIHWR----------------------------------------------------------------------SLLWGRELLARGCRWRI

Query:  GNGSSVPIYFSNWLPNEFSLQIHFFPSLPLTSCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLA------
        G+G  V IY   W+P +    I   P+LP+TS + DLFT+SG W+  K+   F+    EAIL IPL    + D+ IW+F KN  YSVKSGY  A      
Subjt:  GNGSSVPIYFSNWLPNEFSLQIHFFPSLPLTSCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLA------

Query:  HSLSVRDQASSSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLATKDNLLKR---------GMDISNLCVLCHVPLVGLQQ------VPSGR----AY
          LS    A  S+S+L    W  LWK+ VP KI    WR++ + L +K+ L +R          +D  +  +L  +  VG         +P  +    A+
Subjt:  HSLSVRDQASSSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLATKDNLLKR---------GMDISNLCVLCHVPLVGLQQ------VPSGR----AY

Query:  VV----------WVPPPMNELKLNVDAVVRPETGATCGGFVLRNERREVLLSGCEFLPNCWSVDLVEGWAMLKGILIARQMGLFSFHVETDSMRLSKVLT
         V          W PP  N  KLNVD     ETGA   G ++R+   +++ +     P+  SV   E +A+  GI  A  M      +E+DS++   ++ 
Subjt:  VV----------WVPPPMNELKLNVDAVVRPETGATCGGFVLRNERREVLLSGCEFLPNCWSVDLVEGWAMLKGILIARQMGLFSFHVETDSMRLSKVLT

Query:  DD
         +
Subjt:  DD

A0A803NGM9 Uncharacterized protein

9.7e-78

37.3

Show/hide

Query:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPN
        ++P RGLRQ DPLSP+LFL CAE  S L++  ++   + G R  R    VSHL FADDSL+F  A+         LL LY  +SGQ +N+ KS V F  N
Subjt:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPN

Query:  TGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ-------------RPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFW
             RQ ++  L V     H +Y GLPSF+ RN+   L  I+++                GKEVL+K++VQAIP Y M+ FRL K  I  IHR+ A FW
Subjt:  TGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ-------------RPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFW

Query:  WDILEGEKKIH------------------------------------------------WRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQI
        W   + E KIH                                                WRSL+WG++++  G RWR+GNG +V +    WLP   S +I
Subjt:  WDILEGEKKIH------------------------------------------------WRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQI

Query:  HFFPSLPLTSCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLAHSLSVRDQASSSNSTLWQGWWSSLWKMN
        +  P LP    + DL    G+W+E  +R  F     E IL +P      ED+ +WH+ KN  Y+VKSGY++A SL+   +   S+  +   WW +LW++ 
Subjt:  HFFPSLPLTSCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLAHSLSVRDQASSSNSTLWQGWWSSLWKMN

Query:  VPSKIKFFFWRLSLNRLATKDNLLKRGMDISNLCVLC
        +P KIK F W+L  N + T  NL KRG+D+ N+CV C
Subjt:  VPSKIKFFFWRLSLNRLATKDNLLKRGMDISNLCVLC

A0A803Q1K6 Uncharacterized protein

9.7e-78

36.17

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Query:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPN
        ++P RGLRQGDPLSP+LFL CAE  S L++  +R   ++G R  R    +SHL FAD SL+F  AN         LL  Y  +SGQ +NY KS   F  N
Subjt:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPN

Query:  TGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ-------------RPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFW
           + R  ++ +L V     H +Y GLPSF+ RN+   L  I+++                GKEVL+K+IVQAIP YTM+ F+LPK  I  +HR+ + FW
Subjt:  TGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ-------------RPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFW

Query:  WDILEGEKKIHW----------------------------------------------------------------------RSLLWGRELLARGCRWRI
        W   + EKKIHW                                                                      RSL+WG++L+ +G RWR+
Subjt:  WDILEGEKKIHW----------------------------------------------------------------------RSLLWGRELLARGCRWRI

Query:  GNGSSVPIYFSNWLPNEFSLQIHFFPSLPLTSCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLAHSLSVR
        GNG SV +    WLP   + +++  PSLP    + DL  + G W+E  IR  F  T  + IL IP  +   ED+ +WH+ KN  YSVKSGYR+A SL+  
Subjt:  GNGSSVPIYFSNWLPNEFSLQIHFFPSLPLTSCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLAHSLSVR

Query:  DQASSSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLATKDNLLKRGMDISNLCVLC
           S+ +S +   WW  LW++N P K+K F W+++ N L    NL KRG+  S +C  C
Subjt:  DQASSSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLATKDNLLKRGMDISNLCVLC

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)

1.3e-77

36.29

Show/hide

Query:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPN
        I+P RGLRQG PLSPYLFL+C EG SCLLRGA+RR  + G ++AR  P V+HLLFADDS+LF +A   +   +  L   Y   +GQ INY KS ++ +PN
Subjt:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPN

Query:  TGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ-------------RPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFW
                +  VL V    CH  Y GLP+   + R    + ++D+                GKE+L+K+++QAIP Y+M+ FR+PK L  E++ +MA FW
Subjt:  TGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGTLKFIRDQ-------------RPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFW

Query:  WDILEGEKKIH----------------------------------------------------------------------WRSLLWGRELLARGCRWRI
        W   + ++ IH                                                                      WRSL WG+ELL +G RWR+
Subjt:  WDILEGEKKIH----------------------------------------------------------------------WRSLLWGRELLARGCRWRI

Query:  GNGSSVPIYFSNWLPNEFSLQIHFFPSLPLTSCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLAHSLSVR
        G+G S+ +Y   WLP     +I   P LPL++ + DLFTSSG WN   ++  F     +AIL+IPL +L+  D  IWH+E+N +YSVKSGYRLA     +
Subjt:  GNGSSVPIYFSNWLPNEFSLQIHFFPSLPLTSCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLAHSLSVR

Query:  DQAS---SSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLATKDNLLKRGMDISNLCVLCH
        D+ S   S+   L   +W  +W + +P+KIKFF WR + + L     L  R +  + +C  CH
Subjt:  DQAS---SSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLATKDNLLKRGMDISNLCVLCH

SwissProt top hits

e value

%identity

Alignment

P92555 Uncharacterized mitochondrial protein AtMg01250

8.0e-13

57.63

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Query:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDS
        + PSRGLRQGDPLSPYLF+LC E LS L R A+ +  + G R++   P ++HLLFADD+
Subjt:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDS

Arabidopsis top hits

e value

%identity

Alignment

AT3G09510.1 Ribonuclease H-like superfamily protein

6.3e-13

29.84

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Query:  WRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQIHFFPSLPLTS-------CIRDLFTSSGN---WNEEKIRIHFTTTGCEAILRIPLGNLSS
        W SLL G  LL +G R  IG+G ++ I   N + +         P  PL +        I +LF   G+   W++ KI      +    I RI L     
Subjt:  WRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQIHFFPSLPLTS-------CIRDLFTSSGN---WNEEKIRIHFTTTGCEAILRIPLGNLSS

Query:  EDQWIWHFEKNDLYSVKSGY-RLAHSLSVRDQA-SSSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLATKDNLLKRGMDISNLCVLCH
         D+ IW++     Y+V+SGY  L H  S    A +  + ++     + +W + +  K+K F WR     LAT + L  RGM I   C  CH
Subjt:  EDQWIWHFEKNDLYSVKSGY-RLAHSLSVRDQA-SSSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLATKDNLLKRGMDISNLCVLCH

AT4G29090.1 Ribonuclease H-like superfamily protein

9.1e-04

40.48

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Query:  AIPCYTMNFFRLPKCLIGEIHRLMANFWWDILEGEKKIHWRS
        A+P YTM  F LPK +  +I  ++A+FWW   +  K +HW++
Subjt:  AIPCYTMNFFRLPKCLIGEIHRLMANFWWDILEGEKKIHWRS

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)

5.7e-14

57.63

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Query:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDS
        + PSRGLRQGDPLSPYLF+LC E LS L R A+ +  + G R++   P ++HLLFADD+
Subjt:  IVPSRGLRQGDPLSPYLFLLCAEGLSCLLRGAKRRSLITGFRLARTCPPVSHLLFADDS

Sequences

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CDS sequence

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ATGAGCCATCCGCCTGGGGAAAGGTTCGAGTTAGATCCAGAAATCGAGAGGACATTCAGGAGAAGAAGGAGAGAGCAGCATAGAAACCAAAATCAAATGGATAACGTGTC
GCGTCTTCCGCAGGGTCTTGAAGATCCAGCGAACCCCGAGCAGAATCGTTTGCTGGAGCAAAACCAGCCACTAGAGCAAAATGAGCAACAAAATAATCAGGCTGAGAATC
CTATCTTGGGAGTGCCTAGAGATGCCCTTAGATTAACTTTGTTCTCGTATTCTCTGAGAGATGGAGCAAAGGCATGGTTAAATTCTTTTGCTCCAGGATCAATTATTACA
TGGAATGAGTTAGCAAAAAAATTTCTTAGTAAATATTTCCCACCAAATAGGAATGTTAAATTAAGGAGTGAAATAGTAGGGTTTAGGCAACTTGAGGATGAAACTTTTAG
TGAGGCTTGGGAGAGGTTTAAGGAGCTTTTGCAAAAGTGTCCCCACCATGGTTTACCACATTGTATACAAATGGAAACATTTTACAATGGGTTAAATGGAGCAACCCAAG
GTATGGTTGATGCTTCGGCTGGAGGGGCCCTTTTGGCAAAAACTTTTAATGAAGCCCATGAAATTTTAGAAAGAATATCAACTAATAGTTGTAAGTGGTCAGATGTTAGA
GGCACAAATAAAAAGGTTAAGAGTGTGTTAGAGGTTGATGGTGTGTCCACCATTAGGGCTGATATTGCAATGTTAGCTAACGCTCTTAAAAATGTGACAGTGTTTAGTCA
TCAGCAGCCGCCAGCTGTGGAGCCTGTTGTAGTGGTGAACCAAGTTGCAGAGGAAGCATGTGCCTATTGTGGTGAAGACCACAACTACGAGTTTTGTCGTAGCAATCCAG
CTTCTGTGTTTTTTTGTAGCGCAGGCATTGTCCCATCAAGGGGTCTCCGTCAGGGGGATCCACTGTCACCTTATCTGTTCCTGTTATGTGCTGAGGGATTGTCCTGTTTG
CTTCGTGGGGCAAAGCGTAGGTCTCTTATTACAGGGTTTCGGCTTGCACGGACCTGTCCACCGGTTTCGCATTTGTTGTTTGCTGATGACAGTTTGCTCTTTTTTCGTGC
AAATGCTGTTGAGAGTAGTTTTATTTGGGATCTCCTGTTGCTCTATGGGTGTTCCTCTGGTCAGACCATCAATTACGATAAGTCTGTTGTGGCTTTCACCCCAAACACGG
GGGATGACTGCAGACAATATGTCAGCCAGGTTCTTGCAGTTGTATGTAAGCCATGTCATAGTCAGTATTTTGGCCTTCCCTCCTTTATGCCACGTAATCGTTCTGGAACT
CTGAAGTTCATTAGAGACCAGAGACCACGGGGTAAAGAAGTGCTGTTAAAGTCGATTGTGCAAGCTATTCCCTGCTATACAATGAATTTCTTTAGGTTGCCAAAATGCTT
GATTGGTGAGATCCATCGTCTCATGGCAAACTTTTGGTGGGACATTCTAGAAGGGGAGAAGAAGATTCACTGGAGGAGTTTACTATGGGGGCGTGAGTTATTGGCAAGAG
GATGTCGTTGGCGAATAGGTAATGGCTCCTCTGTTCCTATTTACTTTTCGAATTGGCTCCCAAATGAGTTTTCTCTCCAGATTCATTTCTTCCCTTCTTTACCGTTGACT
AGTTGTATTCGGGACTTGTTCACTAGTTCAGGCAATTGGAATGAGGAGAAAATTCGGATCCACTTTACCACGACAGGCTGTGAAGCCATTTTGAGGATACCGCTTGGAAA
TTTGTCATCAGAGGATCAATGGATATGGCATTTTGAGAAGAATGACCTCTACTCTGTTAAAAGTGGCTATCGATTGGCACATAGTTTGAGTGTCCGAGATCAGGCTTCTT
CGTCAAACTCGACCCTATGGCAAGGTTGGTGGTCTAGTCTTTGGAAAATGAATGTTCCTAGCAAGATTAAATTCTTTTTTTGGAGACTATCTCTCAATCGTTTGGCCACC
AAGGATAACCTTCTTAAAAGAGGTATGGATATTTCTAACTTGTGTGTGCTTTGTCATGTTCCGTTGGTTGGACTGCAGCAGGTTCCATCGGGTAGAGCTTATGTCGTGTG
GGTTCCGCCTCCTATGAATGAATTAAAATTGAATGTAGACGCTGTAGTGAGGCCTGAGACTGGGGCAACTTGTGGCGGGTTTGTTTTGCGTAATGAGAGAAGGGAGGTTC
TGCTATCGGGATGCGAATTTTTGCCCAATTGTTGGAGTGTGGATTTGGTTGAGGGATGGGCCATGCTGAAGGGTATCCTAATTGCTCGACAAATGGGTTTGTTTAGTTTT
CATGTTGAGACTGACTCGATGAGACTATCGAAAGTTTTGACAGATGATGTGGATGATATCTCGGAAGTATGA

mRNA sequence

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Protein sequence

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MSHPPGERFELDPEIERTFRRRRREQHRNQNQMDNVSRLPQGLEDPANPEQNRLLEQNQPLEQNEQQNNQAENPILGVPRDALRLTLFSYSLRDGAKAWLNSFAPGSIIT
WNELAKKFLSKYFPPNRNVKLRSEIVGFRQLEDETFSEAWERFKELLQKCPHHGLPHCIQMETFYNGLNGATQGMVDASAGGALLAKTFNEAHEILERISTNSCKWSDVR
GTNKKVKSVLEVDGVSTIRADIAMLANALKNVTVFSHQQPPAVEPVVVVNQVAEEACAYCGEDHNYEFCRSNPASVFFCSAGIVPSRGLRQGDPLSPYLFLLCAEGLSCL
LRGAKRRSLITGFRLARTCPPVSHLLFADDSLLFFRANAVESSFIWDLLLLYGCSSGQTINYDKSVVAFTPNTGDDCRQYVSQVLAVVCKPCHSQYFGLPSFMPRNRSGT
LKFIRDQRPRGKEVLLKSIVQAIPCYTMNFFRLPKCLIGEIHRLMANFWWDILEGEKKIHWRSLLWGRELLARGCRWRIGNGSSVPIYFSNWLPNEFSLQIHFFPSLPLT
SCIRDLFTSSGNWNEEKIRIHFTTTGCEAILRIPLGNLSSEDQWIWHFEKNDLYSVKSGYRLAHSLSVRDQASSSNSTLWQGWWSSLWKMNVPSKIKFFFWRLSLNRLAT
KDNLLKRGMDISNLCVLCHVPLVGLQQVPSGRAYVVWVPPPMNELKLNVDAVVRPETGATCGGFVLRNERREVLLSGCEFLPNCWSVDLVEGWAMLKGILIARQMGLFSF
HVETDSMRLSKVLTDDVDDISEV

Lag0026399 (gene) of Sponge gourd (AG-4) v1 genome