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Lag0026401 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026401
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationchr10:36237274..36237768
RNA-Seq ExpressionLag0026401
SyntenyLag0026401
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067279.1 uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa]5.1e-3655.83Show/hide
Query:  MSMATGNTTTFSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGASRASSST
        +S+    TT+F++P LNQ+LNQ+ TIKLDRGN+LLWK LALPIL++YKL  HL G  PC PK I+  +T     +   + G  S  T        +SSST
Subjt:  MSMATGNTTTFSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGASRASSST

Query:  AGTLVNPLNEVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYL
        A   VNP  E WITTD LLLGWLYNSMT EV  Q+MG  NAK+LWEA   LF IQSRA+ED+L
Subjt:  AGTLVNPLNEVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYL

XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]5.1e-3654.19Show/hide
Query:  FSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGAS-RASSSTAGTLVNPLN
        FS+PPLNQ+LNQ+ T+KLDR N+LLWK LALPIL+ YKLEGHL    PCP   ++ + + +T            + T+EG  A+  ASSS    +VNPL 
Subjt:  FSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGAS-RASSSTAGTLVNPLN

Query:  EVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYLR
        E W+TTD LLLGWLYNSMT +VA Q+MG  N ++LW+A    F +QSRAEED+LR
Subjt:  EVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYLR

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]5.1e-3654.19Show/hide
Query:  FSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGAS-RASSSTAGTLVNPLN
        FS+PPLNQ+LNQ+ T+KLDR N+LLWK LALPIL+ YKLEGHL    PCP   ++ + + +T            + T+EG  A+  ASSS    +VNPL 
Subjt:  FSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGAS-RASSSTAGTLVNPLN

Query:  EVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYLR
        E W+TTD LLLGWLYNSMT +VA Q+MG  N ++LW+A    F +QSRAEED+LR
Subjt:  EVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYLR

XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]5.1e-3654.19Show/hide
Query:  FSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGAS-RASSSTAGTLVNPLN
        FS+PPLNQ+LNQ+ T+KLDR N+LLWK LALPIL+ YKLEGHL    PCP   ++ + + +T            + T+EG  A+  ASSS    +VNPL 
Subjt:  FSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGAS-RASSSTAGTLVNPLN

Query:  EVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYLR
        E W+TTD LLLGWLYNSMT +VA Q+MG  N ++LW+A    F +QSRAEED+LR
Subjt:  EVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYLR

XP_038887015.1 uncharacterized protein LOC120077182 [Benincasa hispida]1.1e-3861.01Show/hide
Query:  GNTTTFSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGASRASSSTAGTLV
        G +T FS+PPLNQLLNQI   KL+RG F+LWK LALPILR YKLE HL GTK C P   V       +T  +I+ G   S  Q  GG   ASS+T     
Subjt:  GNTTTFSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGASRASSSTAGTLV

Query:  NPLNEVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYLR
        NPL EVW+T DQLLLGW YNSMT EVA Q+MGHE+AK LW+AI+SLF +QSRAE+DYLR
Subjt:  NPLNEVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYLR

TrEMBL top hitse value%identityAlignment
A0A1S4DY80 uncharacterized protein LOC1079911162.5e-3655.83Show/hide
Query:  MSMATGNTTTFSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGASRASSST
        +S+    TT+F++P LNQ+LNQ+ TIKLDRGN+LLWK LALPIL++YKL  HL G  PC PK I+  +T     +   + G  S  T        +SSST
Subjt:  MSMATGNTTTFSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGASRASSST

Query:  AGTLVNPLNEVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYL
        A   VNP  E WITTD LLLGWLYNSMT EV  Q+MG  NAK+LWEA   LF IQSRA+ED+L
Subjt:  AGTLVNPLNEVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYL

A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X12.5e-3654.19Show/hide
Query:  FSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGAS-RASSSTAGTLVNPLN
        FS+PPLNQ+LNQ+ T+KLDR N+LLWK LALPIL+ YKLEGHL    PCP   ++ + + +T            + T+EG  A+  ASSS    +VNPL 
Subjt:  FSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGAS-RASSSTAGTLVNPLN

Query:  EVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYLR
        E W+TTD LLLGWLYNSMT +VA Q+MG  N ++LW+A    F +QSRAEED+LR
Subjt:  EVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYLR

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X42.5e-3654.19Show/hide
Query:  FSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGAS-RASSSTAGTLVNPLN
        FS+PPLNQ+LNQ+ T+KLDR N+LLWK LALPIL+ YKLEGHL    PCP   ++ + + +T            + T+EG  A+  ASSS    +VNPL 
Subjt:  FSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGAS-RASSSTAGTLVNPLN

Query:  EVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYLR
        E W+TTD LLLGWLYNSMT +VA Q+MG  N ++LW+A    F +QSRAEED+LR
Subjt:  EVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYLR

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X32.5e-3654.19Show/hide
Query:  FSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGAS-RASSSTAGTLVNPLN
        FS+PPLNQ+LNQ+ T+KLDR N+LLWK LALPIL+ YKLEGHL    PCP   ++ + + +T            + T+EG  A+  ASSS    +VNPL 
Subjt:  FSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGAS-RASSSTAGTLVNPLN

Query:  EVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYLR
        E W+TTD LLLGWLYNSMT +VA Q+MG  N ++LW+A    F +QSRAEED+LR
Subjt:  EVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYLR

A0A5A7VPY0 Uncharacterized protein2.5e-3655.83Show/hide
Query:  MSMATGNTTTFSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGASRASSST
        +S+    TT+F++P LNQ+LNQ+ TIKLDRGN+LLWK LALPIL++YKL  HL G  PC PK I+  +T     +   + G  S  T        +SSST
Subjt:  MSMATGNTTTFSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGASRASSST

Query:  AGTLVNPLNEVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYL
        A   VNP  E WITTD LLLGWLYNSMT EV  Q+MG  NAK+LWEA   LF IQSRA+ED+L
Subjt:  AGTLVNPLNEVWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATGGCAACCGGAAATACCACCACGTTCAGCAGCCCTCCTCTTAATCAGTTGCTAAATCAGATTAAAACAATTAAGTTGGATAGAGGAAACTTCCTCTTATGGAA
AAACCTAGCCCTCCCAATTCTGAGGACCTACAAGCTTGAGGGTCATCTTTTAGGCACAAAACCATGTCCTCCCAAACAAATTGTCCAATCGATGACCATCGATACTGCCA
CAACAACTACCATTGATGGGGGAGCTTCAAGCTCAGCGACCCAAGAAGGAGGAGGTGCATCAAGAGCTTCAAGCTCCACTGCTGGAACACTAGTAAATCCACTTAATGAA
GTATGGATTACTACCGACCAACTGCTATTAGGTTGGCTATACAATTCAATGACTGTGGAAGTAGCTACGCAAGTTATGGGCCATGAGAATGCTAAAGAACTATGGGAAGC
AATCAATAGTCTATTCGAAATTCAGTCCAGAGCAGAAGAGGACTACCTCAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAATGGCAACCGGAAATACCACCACGTTCAGCAGCCCTCCTCTTAATCAGTTGCTAAATCAGATTAAAACAATTAAGTTGGATAGAGGAAACTTCCTCTTATGGAA
AAACCTAGCCCTCCCAATTCTGAGGACCTACAAGCTTGAGGGTCATCTTTTAGGCACAAAACCATGTCCTCCCAAACAAATTGTCCAATCGATGACCATCGATACTGCCA
CAACAACTACCATTGATGGGGGAGCTTCAAGCTCAGCGACCCAAGAAGGAGGAGGTGCATCAAGAGCTTCAAGCTCCACTGCTGGAACACTAGTAAATCCACTTAATGAA
GTATGGATTACTACCGACCAACTGCTATTAGGTTGGCTATACAATTCAATGACTGTGGAAGTAGCTACGCAAGTTATGGGCCATGAGAATGCTAAAGAACTATGGGAAGC
AATCAATAGTCTATTCGAAATTCAGTCCAGAGCAGAAGAGGACTACCTCAGGTGA
Protein sequenceShow/hide protein sequence
MSMATGNTTTFSSPPLNQLLNQIKTIKLDRGNFLLWKNLALPILRTYKLEGHLLGTKPCPPKQIVQSMTIDTATTTTIDGGASSSATQEGGGASRASSSTAGTLVNPLNE
VWITTDQLLLGWLYNSMTVEVATQVMGHENAKELWEAINSLFEIQSRAEEDYLR