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Lag0026403 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026403
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr10:36269011..36269313
RNA-Seq ExpressionLag0026403
SyntenyLag0026403
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581797.1 RING-H2 finger protein ATL3, partial [Cucurbita argyrosperma subsp. sororia]3.4e-1476.56Show/hide
Query:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
        M D+YKL QHSGD V IELPGMVIVTAI+VFLLVLVF LLLQL+ARWLWSRIE PS  P+   R
Subjt:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
KAG7018248.1 RING-H2 finger protein ATL3, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-1476.56Show/hide
Query:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
        M D+YKL QHSGD V IELPGMVIVTAI+VFLLVLVF LLLQL+ARWLWSRIE PS  P+   R
Subjt:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
XP_022955893.1 RING-H2 finger protein ATL3-like [Cucurbita moschata]3.4e-1476.56Show/hide
Query:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
        M D+YKL QHSGD V IELPGMVIVTAI+VFLLVLVF LLLQL+ARWLWSRIE PS  P+   R
Subjt:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
XP_022980687.1 RING-H2 finger protein ATL60-like [Cucurbita maxima]5.7e-1475Show/hide
Query:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
        M D+YKL QHSGD V+IELPGMVIVTAI+VFLLVLVF LLLQL+ARWLWSRIE P+  P+   R
Subjt:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
XP_023527880.1 RING-H2 finger protein ATL3-like [Cucurbita pepo subsp. pepo]3.4e-1476.56Show/hide
Query:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
        M D+YKL QHSGD V IELPGMVIVTAI+VFLLVLVF LLLQL+ARWLWSRIE PS  P+   R
Subjt:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
TrEMBL top hitse value%identityAlignment
A0A0A0L962 RING-type E3 ubiquitin transferase8.9e-1368.75Show/hide
Query:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
        M DEYKL QHS D V+IELPGMVI+TAI+VF L+LVF LLLQL+A+WLWSRIE P+  P+   R
Subjt:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
A0A1S3CCE4 RING-type E3 ubiquitin transferase1.8e-1371.88Show/hide
Query:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
        M DEYKL QHSGD V IELPGMVI+TAI+VF LVLVF LLLQL+A+WLWSRIE P+  P+   R
Subjt:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
A0A5A7UJD5 RING-type E3 ubiquitin transferase1.8e-1371.88Show/hide
Query:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
        M DEYKL QHSGD V IELPGMVI+TAI+VF LVLVF LLLQL+A+WLWSRIE P+  P+   R
Subjt:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
A0A6J1GV98 RING-type E3 ubiquitin transferase1.6e-1476.56Show/hide
Query:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
        M D+YKL QHSGD V IELPGMVIVTAI+VFLLVLVF LLLQL+ARWLWSRIE PS  P+   R
Subjt:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
A0A6J1IRZ5 RING-type E3 ubiquitin transferase2.8e-1475Show/hide
Query:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
        M D+YKL QHSGD V+IELPGMVIVTAI+VFLLVLVF LLLQL+ARWLWSRIE P+  P+   R
Subjt:  MADEYKL-QHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACGAGTACAAGCTTCAACATTCCGGCGACTTAGTGGCCATCGAGCTCCCTGGAATGGTCATTGTGACCGCCATTATAGTGTTCTTGTTGGTGCTCGTGTTTTT
TCTTCTTCTCCAACTCTTTGCCAGATGGTTATGGTCTCGCATTGAAGGTCCCTCGTCGCCACCGATTCGAATTCTCCGCCATCCAGAGGAATGGATCAGACATAGACCAC
AAACAAAAATGCTCCAAAACAGAAGGAAAAAAAATGAATATATATTAGTCTATATTGGCATAGTGAATATACATAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACGAGTACAAGCTTCAACATTCCGGCGACTTAGTGGCCATCGAGCTCCCTGGAATGGTCATTGTGACCGCCATTATAGTGTTCTTGTTGGTGCTCGTGTTTTT
TCTTCTTCTCCAACTCTTTGCCAGATGGTTATGGTCTCGCATTGAAGGTCCCTCGTCGCCACCGATTCGAATTCTCCGCCATCCAGAGGAATGGATCAGACATAGACCAC
AAACAAAAATGCTCCAAAACAGAAGGAAAAAAAATGAATATATATTAGTCTATATTGGCATAGTGAATATACATAAGAAATAA
Protein sequenceShow/hide protein sequence
MADEYKLQHSGDLVAIELPGMVIVTAIIVFLLVLVFFLLLQLFARWLWSRIEGPSSPPIRILRHPEEWIRHRPQTKMLQNRRKKNEYILVYIGIVNIHKK