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Lag0026405 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026405
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein sym-1
Genome locationchr10:36290873..36291244
RNA-Seq ExpressionLag0026405
SyntenyLag0026405
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596182.1 hypothetical protein SDJN03_09362, partial [Cucurbita argyrosperma subsp. sororia]2.6e-0875Show/hide
Query:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRG
        MVL G TLSL+ PP CTR T NGGP+LRFGLQA SLETPVQ++G
Subjt:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRG

KAG7027719.1 PXMP2/4 family protein 4 [Cucurbita argyrosperma subsp. argyrosperma]2.6e-0875Show/hide
Query:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRG
        MVL G TLSL+ PP CTR T NGGP+LRFGLQA SLETPVQ++G
Subjt:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRG

XP_022152060.1 protein sym-1 [Momordica charantia]2.3e-1284.09Show/hide
Query:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRG
        MVLCG+TLSLKPPP CTR +SN GPTL FGLQAPSLETPVQM+G
Subjt:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRG

XP_022971452.1 protein SYM1-like [Cucurbita maxima]5.8e-0854.05Show/hide
Query:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRGIMPVLYATVIAWSLRMWVGVKCNVGRRDLR
        MVL G TLSL+ PP CTR T NGGP+LRFGLQA SL+TPVQ++G     +A   + S R+   V   VGRR ++
Subjt:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRGIMPVLYATVIAWSLRMWVGVKCNVGRRDLR

XP_038903823.1 protein sym-1 [Benincasa hispida]2.6e-0872.73Show/hide
Query:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRG
        MV CG+TLSLKPP  CTRF  NGGP   FGLQAP L TPVQM+G
Subjt:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRG

TrEMBL top hitse value%identityAlignment
A0A1S3B718 protein SYM18.1e-0870.45Show/hide
Query:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRG
        MV CG+TLSLKPP  CTR + NGG    FGLQAP LETPVQM+G
Subjt:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRG

A0A5D3DPM1 Protein SYM18.1e-0870.45Show/hide
Query:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRG
        MV CG+TLSLKPP  CTR + NGG    FGLQAP LETPVQM+G
Subjt:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRG

A0A6J1DGH9 protein sym-11.1e-1284.09Show/hide
Query:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRG
        MVLCG+TLSLKPPP CTR +SN GPTL FGLQAPSLETPVQM+G
Subjt:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRG

A0A6J1FCF7 protein sym-1-like3.7e-0854.05Show/hide
Query:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRGIMPVLYATVIAWSLRMWVGVKCNVGRRDLR
        MVL G TLSL+ PP CTR   NGGP+LRFGLQA SLETPVQ++G     +A   + S R+   V   VGRR ++
Subjt:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRGIMPVLYATVIAWSLRMWVGVKCNVGRRDLR

A0A6J1I1Z8 protein SYM1-like2.8e-0854.05Show/hide
Query:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRGIMPVLYATVIAWSLRMWVGVKCNVGRRDLR
        MVL G TLSL+ PP CTR T NGGP+LRFGLQA SL+TPVQ++G     +A   + S R+   V   VGRR ++
Subjt:  MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRGIMPVLYATVIAWSLRMWVGVKCNVGRRDLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTCTGTGGCATCACTCTTTCTCTGAAACCTCCTCCTTTTTGCACTCGCTTCACCTCCAATGGCGGACCCACCTTACGTTTCGGCCTCCAAGCTCCAAGTCTTGA
AACCCCAGTTCAAATGAGGGGAATCATGCCTGTTCTTTACGCCACAGTCATTGCTTGGAGTTTAAGGATGTGGGTCGGCGTCAAATGCAATGTGGGTCGCCGAGATTTAC
GAATTTCCGGATTTCAGCATCCTCTGGCGATGGTTCTGGCGACGGCTTTGGCTCTGGAGGTGGTGATGGTGGATATGGAGGTTATGGTCATGAAAATAATGGAGGCAGTG
AAGGGGATGGTGGCAAAGGCGGGGATAACTGGTCCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTCTGTGGCATCACTCTTTCTCTGAAACCTCCTCCTTTTTGCACTCGCTTCACCTCCAATGGCGGACCCACCTTACGTTTCGGCCTCCAAGCTCCAAGTCTTGA
AACCCCAGTTCAAATGAGGGGAATCATGCCTGTTCTTTACGCCACAGTCATTGCTTGGAGTTTAAGGATGTGGGTCGGCGTCAAATGCAATGTGGGTCGCCGAGATTTAC
GAATTTCCGGATTTCAGCATCCTCTGGCGATGGTTCTGGCGACGGCTTTGGCTCTGGAGGTGGTGATGGTGGATATGGAGGTTATGGTCATGAAAATAATGGAGGCAGTG
AAGGGGATGGTGGCAAAGGCGGGGATAACTGGTCCTTCTTAA
Protein sequenceShow/hide protein sequence
MVLCGITLSLKPPPFCTRFTSNGGPTLRFGLQAPSLETPVQMRGIMPVLYATVIAWSLRMWVGVKCNVGRRDLRISGFQHPLAMVLATALALEVVMVDMEVMVMKIMEAV
KGMVAKAGITGPS