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Lag0026419 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026419
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr10:36544919..36545429
RNA-Seq ExpressionLag0026419
SyntenyLag0026419
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.5e-0443.86Show/hide
Query:  DLSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG
        DL+ T+EEY+ L+ +P+    KLY YD++LT +R+L+K  G++ A+E++ Q+K K G
Subjt:  DLSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]8.6e-0528.21Show/hide
Query:  ESKKLVREWSEKIQAKSEIKLPKEISNQPPTMNVFNYSTRSIEELNE-----------QPLYIFGVL------SISVSRL-----------------TLD
        +S + V +WSE  Q +S +  PK++    P      +   ++EEL             + +  +G +      +I+ S L                 T D
Subjt:  ESKKLVREWSEKIQAKSEIKLPKEISNQPPTMNVFNYSTRSIEELNE-----------QPLYIFGVL------SISVSRL-----------------TLD

Query:  LSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG
        L+ T+EEYQ L+ +PV    KLY Y ++LT +R+L+K  G++ A+E++ Q+K K G
Subjt:  LSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]8.6e-0528.85Show/hide
Query:  ESKKLVREWSEKIQAKSEIKLPKEISNQPPTMNVFNYSTRSIEELNE-----------QPLYIFGVL------SISVSRL-----------------TLD
        +S + V +WSE  Q KS    PK++    P      +   ++EEL             +    +G +      +I+ S L                 T D
Subjt:  ESKKLVREWSEKIQAKSEIKLPKEISNQPPTMNVFNYSTRSIEELNE-----------QPLYIFGVL------SISVSRL-----------------TLD

Query:  LSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG
        L+ T+EEYQ L+ +PV     LY YD++LT +R+L+K  G++ A+E++ Q+K K G
Subjt:  LSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG

KAA0065295.1 uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]3.0e-0528.85Show/hide
Query:  ESKKLVREWSEKIQAKSEIKLPKEISNQPPTMNVFNYSTRSIEELNE-----------QPLYIFGVL------SISVSRL-----------------TLD
        +S K V +WSE  Q +S +  PK++    P      +   ++EEL             +    +G +      +I+ S L                 T D
Subjt:  ESKKLVREWSEKIQAKSEIKLPKEISNQPPTMNVFNYSTRSIEELNE-----------QPLYIFGVL------SISVSRL-----------------TLD

Query:  LSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG
        L+ T+EEYQ L+ +PV    KLY YD++LT +R+L+K  G++ A+E++  +K K G
Subjt:  LSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.5e-0443.86Show/hide
Query:  DLSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG
        DL+ T+EEY+ L+ +P+    KLY YD++LT +R+L+K  G++ A+E++ Q+K K G
Subjt:  DLSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG

TrEMBL top hitse value%identityAlignment
A0A5A7SNY0 Glial fibrillary acidic protein-like7.1e-0543.86Show/hide
Query:  DLSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG
        DL+ T+EEY+ L+ +P+    KLY YD++LT +R+L+K  G++ A+E++ Q+K K G
Subjt:  DLSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG

A0A5A7SUT0 Reverse transcriptase4.2e-0528.21Show/hide
Query:  ESKKLVREWSEKIQAKSEIKLPKEISNQPPTMNVFNYSTRSIEELNE-----------QPLYIFGVL------SISVSRL-----------------TLD
        +S + V +WSE  Q +S +  PK++    P      +   ++EEL             + +  +G +      +I+ S L                 T D
Subjt:  ESKKLVREWSEKIQAKSEIKLPKEISNQPPTMNVFNYSTRSIEELNE-----------QPLYIFGVL------SISVSRL-----------------TLD

Query:  LSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG
        L+ T+EEYQ L+ +PV    KLY Y ++LT +R+L+K  G++ A+E++ Q+K K G
Subjt:  LSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG

A0A5A7TXA1 Glial fibrillary acidic protein-like4.2e-0528.85Show/hide
Query:  ESKKLVREWSEKIQAKSEIKLPKEISNQPPTMNVFNYSTRSIEELNE-----------QPLYIFGVL------SISVSRL-----------------TLD
        +S + V +WSE  Q KS    PK++    P      +   ++EEL             +    +G +      +I+ S L                 T D
Subjt:  ESKKLVREWSEKIQAKSEIKLPKEISNQPPTMNVFNYSTRSIEELNE-----------QPLYIFGVL------SISVSRL-----------------TLD

Query:  LSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG
        L+ T+EEYQ L+ +PV     LY YD++LT +R+L+K  G++ A+E++ Q+K K G
Subjt:  LSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG

A0A5A7VHI3 Uncharacterized protein1.4e-0528.85Show/hide
Query:  ESKKLVREWSEKIQAKSEIKLPKEISNQPPTMNVFNYSTRSIEELNE-----------QPLYIFGVL------SISVSRL-----------------TLD
        +S K V +WSE  Q +S +  PK++    P      +   ++EEL             +    +G +      +I+ S L                 T D
Subjt:  ESKKLVREWSEKIQAKSEIKLPKEISNQPPTMNVFNYSTRSIEELNE-----------QPLYIFGVL------SISVSRL-----------------TLD

Query:  LSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG
        L+ T+EEYQ L+ +PV    KLY YD++LT +R+L+K  G++ A+E++  +K K G
Subjt:  LSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG

A0A5D3D0S2 Glial fibrillary acidic protein-like7.1e-0543.86Show/hide
Query:  DLSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG
        DL+ T+EEY+ L+ +P+    KLY YD++LT +R+L+K  G++ A+E++ Q+K K G
Subjt:  DLSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRALAKIAGNLTATEIEHQLKKKGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAAAGTCATTGGTTGGCATTGAAAGCAAAAAACTCGTACGTGAATGGTCTGAGAAGATACAAGCCAAATCTGAAATAAAGTTGCCAAAAGAGATCTCAAATCA
ACCTCCAACGATGAACGTCTTCAATTATTCCACCCGAAGTATCGAGGAACTAAATGAGCAACCGCTCTACATTTTTGGAGTCCTATCTATAAGTGTTTCACGTTTAACTC
TTGATCTGTCACGAACTGTGGAGGAGTATCAGGAACTACTTCGAATGCCAGTAATGTCCAAAGCGAAGCTGTATTTCTATGACAAGAGACTGACGGGTAAGAGGGCTTTG
GCGAAAATTGCTGGTAACTTGACTGCCACCGAGATAGAACACCAGCTCAAAAAGAAAGGTGGAATTAAGGGATACATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGAAAGTCATTGGTTGGCATTGAAAGCAAAAAACTCGTACGTGAATGGTCTGAGAAGATACAAGCCAAATCTGAAATAAAGTTGCCAAAAGAGATCTCAAATCA
ACCTCCAACGATGAACGTCTTCAATTATTCCACCCGAAGTATCGAGGAACTAAATGAGCAACCGCTCTACATTTTTGGAGTCCTATCTATAAGTGTTTCACGTTTAACTC
TTGATCTGTCACGAACTGTGGAGGAGTATCAGGAACTACTTCGAATGCCAGTAATGTCCAAAGCGAAGCTGTATTTCTATGACAAGAGACTGACGGGTAAGAGGGCTTTG
GCGAAAATTGCTGGTAACTTGACTGCCACCGAGATAGAACACCAGCTCAAAAAGAAAGGTGGAATTAAGGGATACATCTAG
Protein sequenceShow/hide protein sequence
MEGKSLVGIESKKLVREWSEKIQAKSEIKLPKEISNQPPTMNVFNYSTRSIEELNEQPLYIFGVLSISVSRLTLDLSRTVEEYQELLRMPVMSKAKLYFYDKRLTGKRAL
AKIAGNLTATEIEHQLKKKGGIKGYI