; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026432 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026432
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr10:36684967..36685807
RNA-Seq ExpressionLag0026432
SyntenyLag0026432
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.9e-3964Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND
        EEVDNS + +QRTSVFDRIKP  TR SVFQR+SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T++Q +R+M +L+ K + E N+D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND

Query:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK
         K+ S +PSRMKRK SV INTEGSL VKP  II TNP ++G ++  DE+K
Subjt:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK

KAA0050736.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.6e-4063.16Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND
        EEVDNS + +QRTSVFDRIKP  TR SVFQR+SMA  EEENQC MST TR SAF+RLS+S SKK RPSTS FDRLK+T++Q +R+M +L+ K + E N+D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND

Query:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDKGF
         K+ S +PSR+KRK S+ INTEGSL VKP  II TNP ++G ++  DE+K F
Subjt:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDKGF

KAA0055462.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.3e-3962.67Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND
        EEVDNS + +QRTSVFDRIKP  TR SVFQR+SMA  EE+NQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T++Q +R+M +L+ K + E N+D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND

Query:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK
         K+ + +PSRMKRK SV INTEGSL VKP  II TNP ++G ++  DE+K
Subjt:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK

TYK08944.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.3e-3962.67Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND
        EEVDNS + +QRTSVFDRIKP  TR SVFQR+SMA  EE+NQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T++Q +R+M +L+ K + E N+D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND

Query:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK
         K+ + +PSRMKRK SV INTEGSL VKP  II TNP ++G ++  DE+K
Subjt:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK

TYK16519.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.9e-3964Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND
        EEVDNS + +QRTSVFDRIKP  TR  VFQR+SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+NQ KR+M + + K + E N+D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND

Query:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK
         K+ S +PSRMKRK SV INTEGSL VKP  II TNP ++G ++  DE+K
Subjt:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK

TrEMBL top hitse value%identityAlignment
A0A5A7TQ06 Retrotransposon gag protein9.3e-4064Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND
        EEVDNS + +QRTSVFDRIKP  TR SVFQR+SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T++Q +R+M +L+ K + E N+D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND

Query:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK
         K+ S +PSRMKRK SV INTEGSL VKP  II TNP ++G ++  DE+K
Subjt:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK

A0A5A7U974 Retrotransposon gag protein3.2e-4063.16Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND
        EEVDNS + +QRTSVFDRIKP  TR SVFQR+SMA  EEENQC MST TR SAF+RLS+S SKK RPSTS FDRLK+T++Q +R+M +L+ K + E N+D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND

Query:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDKGF
         K+ S +PSR+KRK S+ INTEGSL VKP  II TNP ++G ++  DE+K F
Subjt:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDKGF

A0A5A7UI09 Retrotransposon gag protein3.5e-3962.67Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND
        EEVDNS + +QRTSVFDRIKP  TR SVFQR+SMA  EE+NQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T++Q +R+M +L+ K + E N+D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND

Query:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK
         K+ + +PSRMKRK SV INTEGSL VKP  II TNP ++G ++  DE+K
Subjt:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK

A0A5D3CCI8 Retrotransposon gag protein3.5e-3962.67Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND
        EEVDNS + +QRTSVFDRIKP  TR SVFQR+SMA  EE+NQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T++Q +R+M +L+ K + E N+D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND

Query:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK
         K+ + +PSRMKRK SV INTEGSL VKP  II TNP ++G ++  DE+K
Subjt:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK

A0A5D3D209 Retrotransposon gag protein9.3e-4064Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND
        EEVDNS + +QRTSVFDRIKP  TR  VFQR+SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+NQ KR+M + + K + E N+D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNND

Query:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK
         K+ S +PSRMKRK SV INTEGSL VKP  II TNP ++G ++  DE+K
Subjt:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCAAAGAAAAGTCGACCTTC
AACATCTGTTTTTGATCGCCTCAAAGTAACAAGCAATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTACGATGAAGTAAACAGCGACAAGAAGCTTCAAA
GTAGCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGAAGAAGTTGACAATTCCAAGAAAAGTGAACAAAGGACTTCCGTCTTCGATCGCATC
AAGCCTCCACCTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAG
GCTAAGTGTCTCCACATCAAAGAAAAGTCGACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGCAATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAAC
TTTACGATGAAGTAAACAACGACAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCA
AATCTCATTATCTTGACCAATCCTACAAGTCAAGGATCTGATCAAGACCATGATGAAGATAAGGGCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCAAAGAAAAGTCGACCTTC
AACATCTGTTTTTGATCGCCTCAAAGTAACAAGCAATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTACGATGAAGTAAACAGCGACAAGAAGCTTCAAA
GTAGCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGAAGAAGTTGACAATTCCAAGAAAAGTGAACAAAGGACTTCCGTCTTCGATCGCATC
AAGCCTCCACCTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAG
GCTAAGTGTCTCCACATCAAAGAAAAGTCGACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGCAATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAAC
TTTACGATGAAGTAAACAACGACAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCA
AATCTCATTATCTTGACCAATCCTACAAGTCAAGGATCTGATCAAGACCATGATGAAGATAAGGGCTTTTAA
Protein sequenceShow/hide protein sequence
MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNSDKKLQSSIPSRMKRKFSVLINTEEEVDNSKKSEQRTSVFDRI
KPPPTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSNQPKRKMDNLEVKLYDEVNNDKKLQSSIPSRMKRKFSVLINTEGSLKVKP
NLIILTNPTSQGSDQDHDEDKGF