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Lag0026434 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026434
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:36694146..36695428
RNA-Seq ExpressionLag0026434
SyntenyLag0026434
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]2.4e-0736.36Show/hide
Query:  KVHNVSVSCMTVDMAKLIGEEAGKLEEVDCDGVNNWSGSVMRVRVVVDITKPLQRNTKIRAKGGRE
        ++HN+   C++ +MA ++G + G +EE++ DG + W+G  +RVRV +D++KPL+R  K++   G++
Subjt:  KVHNVSVSCMTVDMAKLIGEEAGKLEEVDCDGVNNWSGSVMRVRVVVDITKPLQRNTKIRAKGGRE

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]1.8e-0742.42Show/hide
Query:  KVHNVSVSCMTVDMAKLIGEEAGKLEEVDCDGVNNWSGSVMRVRVVVDITKPLQRNTKIRAKGGRE
        ++H +   CM  DMAK +G   G++EE+DC+G   W+G  +RVRV +DI+KP +R  K+R    +E
Subjt:  KVHNVSVSCMTVDMAKLIGEEAGKLEEVDCDGVNNWSGSVMRVRVVVDITKPLQRNTKIRAKGGRE

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]8.4e-0537.66Show/hide
Query:  DIDMCLVA---KVHNVSVSCMTVDMAKLIGEEAGKLEEVDCDGVNNWSGSVMRVRVVVDITKPLQRNTKIRAKGGRE
        DID+ L A   ++H ++  CMT DMAK +G   G++EEVD     +W    + VRV +++ KPL+R  K++   G++
Subjt:  DIDMCLVA---KVHNVSVSCMTVDMAKLIGEEAGKLEEVDCDGVNNWSGSVMRVRVVVDITKPLQRNTKIRAKGGRE

XP_024041282.1 uncharacterized protein LOC112098886 [Citrus clementina]2.4e-0441.82Show/hide
Query:  KVHNVSVSCMTVDMAKLIGEEAGKLEEVDCDGVNNWSGSVMRVRVVVDITKPLQR
        ++H+V + CMT +MA ++GE  GK+EEV+ D    + G  +R+R+ VD+TK L++
Subjt:  KVHNVSVSCMTVDMAKLIGEEAGKLEEVDCDGVNNWSGSVMRVRVVVDITKPLQR

XP_024953751.1 uncharacterized protein LOC112498094 [Citrus sinensis]1.4e-0437.88Show/hide
Query:  KVHNVSVSCMTVDMAKLIGEEAGKLEEVDCDGVNNWSGSVMRVRVVVDITKPLQRNTKIRAKGGRE
        ++H+V + CMT +M   +GE  GK+EEV+ D      G  +R+R+ VDIT+PL++  ++  +G  E
Subjt:  KVHNVSVSCMTVDMAKLIGEEAGKLEEVDCDGVNNWSGSVMRVRVVVDITKPLQRNTKIRAKGGRE

TrEMBL top hitse value%identityAlignment
A0A6J1D765 uncharacterized protein LOC1110179021.1e-0736.36Show/hide
Query:  KVHNVSVSCMTVDMAKLIGEEAGKLEEVDCDGVNNWSGSVMRVRVVVDITKPLQRNTKIRAKGGRE
        ++HN+   C++ +MA ++G + G +EE++ DG + W+G  +RVRV +D++KPL+R  K++   G++
Subjt:  KVHNVSVSCMTVDMAKLIGEEAGKLEEVDCDGVNNWSGSVMRVRVVVDITKPLQRNTKIRAKGGRE

A0A6J1DP89 uncharacterized protein LOC1110229328.7e-0842.42Show/hide
Query:  KVHNVSVSCMTVDMAKLIGEEAGKLEEVDCDGVNNWSGSVMRVRVVVDITKPLQRNTKIRAKGGRE
        ++H +   CM  DMAK +G   G++EE+DC+G   W+G  +RVRV +DI+KP +R  K+R    +E
Subjt:  KVHNVSVSCMTVDMAKLIGEEAGKLEEVDCDGVNNWSGSVMRVRVVVDITKPLQRNTKIRAKGGRE

A0A6J1DVS4 uncharacterized protein LOC1110235554.1e-0537.66Show/hide
Query:  DIDMCLVA---KVHNVSVSCMTVDMAKLIGEEAGKLEEVDCDGVNNWSGSVMRVRVVVDITKPLQRNTKIRAKGGRE
        DID+ L A   ++H ++  CMT DMAK +G   G++EEVD     +W    + VRV +++ KPL+R  K++   G++
Subjt:  DIDMCLVA---KVHNVSVSCMTVDMAKLIGEEAGKLEEVDCDGVNNWSGSVMRVRVVVDITKPLQRNTKIRAKGGRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGCTTGTGGATCGATGGAAGAAGTGGGCGTTGACTGAGAAGGAAGCGAAGGTCATCGAGGTGGCAGATGACAAAGTGTTCTTCTCGGCAGAGGATATTGACAT
GTGTCTTGTTGCCAAGGTGCATAATGTGTCGGTCAGTTGTATGACTGTTGATATGGCAAAGTTGATCGGGGAGGAAGCTGGAAAGCTGGAGGAAGTGGACTGTGATGGAG
TGAATAACTGGTCGGGGTCGGTGATGAGGGTTAGGGTGGTGGTGGATATCACTAAACCACTCCAAAGGAACACAAAAATAAGAGCGAAAGGAGGGAGGGAGGGCCAAGGC
TTGGAGGAGGGTAGGGGCGTAGCTGAACCAGAAGGGAAGAAAGGAAATGGAGTGGAGGTTGGGGGAAAAGGAGAAAAGAGGGAGGGGAGTGAGCCTTCGGGGAAGGGAGG
GGTGGAGCAGAATTTGGGGCAAGGGGAGGGCCTGGTTGAAGTGCTGGCAAAATCTTTAAGGGGGGGGGGGGAGGGGAACGACCAGTCGGGGGTACAGAATGAGGGAGTGG
GAGTTATAGGTGGGAGGAGTGAGGTGAGTCTGGGGGTAGGGAACGGAGACGGGAATGGTGAGAAGAATGGGCTAAAGGGGAAGGAAAAGGTGGGATATGACACACCACAA
GGGATGAATATTGACCTCATTAGTAGAAGTGAAAGTATGGAAAATGTTGGGGAGAGGCAAGTTGAATTGTTGGAGACTGCTACGCCAGGTAGTCTACATTCTGGTAGGGG
GTTTTGGGTAAGAAGTGGAAGAGGAAAGCTAGGGAGGAAGGAGGTGGTATGGGAAAGGGTGAAGAATCCAGGCTGGGCAAACGAGTTTGTCCTACTGGGGAGGATGTTGG
TTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGCTTGTGGATCGATGGAAGAAGTGGGCGTTGACTGAGAAGGAAGCGAAGGTCATCGAGGTGGCAGATGACAAAGTGTTCTTCTCGGCAGAGGATATTGACAT
GTGTCTTGTTGCCAAGGTGCATAATGTGTCGGTCAGTTGTATGACTGTTGATATGGCAAAGTTGATCGGGGAGGAAGCTGGAAAGCTGGAGGAAGTGGACTGTGATGGAG
TGAATAACTGGTCGGGGTCGGTGATGAGGGTTAGGGTGGTGGTGGATATCACTAAACCACTCCAAAGGAACACAAAAATAAGAGCGAAAGGAGGGAGGGAGGGCCAAGGC
TTGGAGGAGGGTAGGGGCGTAGCTGAACCAGAAGGGAAGAAAGGAAATGGAGTGGAGGTTGGGGGAAAAGGAGAAAAGAGGGAGGGGAGTGAGCCTTCGGGGAAGGGAGG
GGTGGAGCAGAATTTGGGGCAAGGGGAGGGCCTGGTTGAAGTGCTGGCAAAATCTTTAAGGGGGGGGGGGGAGGGGAACGACCAGTCGGGGGTACAGAATGAGGGAGTGG
GAGTTATAGGTGGGAGGAGTGAGGTGAGTCTGGGGGTAGGGAACGGAGACGGGAATGGTGAGAAGAATGGGCTAAAGGGGAAGGAAAAGGTGGGATATGACACACCACAA
GGGATGAATATTGACCTCATTAGTAGAAGTGAAAGTATGGAAAATGTTGGGGAGAGGCAAGTTGAATTGTTGGAGACTGCTACGCCAGGTAGTCTACATTCTGGTAGGGG
GTTTTGGGTAAGAAGTGGAAGAGGAAAGCTAGGGAGGAAGGAGGTGGTATGGGAAAGGGTGAAGAATCCAGGCTGGGCAAACGAGTTTGTCCTACTGGGGAGGATGTTGG
TTTAA
Protein sequenceShow/hide protein sequence
MEELVDRWKKWALTEKEAKVIEVADDKVFFSAEDIDMCLVAKVHNVSVSCMTVDMAKLIGEEAGKLEEVDCDGVNNWSGSVMRVRVVVDITKPLQRNTKIRAKGGREGQG
LEEGRGVAEPEGKKGNGVEVGGKGEKREGSEPSGKGGVEQNLGQGEGLVEVLAKSLRGGGEGNDQSGVQNEGVGVIGGRSEVSLGVGNGDGNGEKNGLKGKEKVGYDTPQ
GMNIDLISRSESMENVGERQVELLETATPGSLHSGRGFWVRSGRGKLGRKEVVWERVKNPGWANEFVLLGRMLV