; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026444 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026444
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionregulation of nuclear pre-mRNA domain-containing protein 1B-like
Genome locationchr10:36850051..36864613
RNA-Seq ExpressionLag0026444
SyntenyLag0026444
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596197.1 Regulation of nuclear pre-mRNA domain-containing protein 1B, partial [Cucurbita argyrosperma subsp. sororia]1.4e-6695.8Show/hide
Query:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQE
        MLGKNPPPLP+SNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNAS+AQGTQPRSALLD+LQEQE
Subjt:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQE

Query:  NVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ
        NV+QQCIGQLE+VEATRASLVSLL+EALQDQESKLELVRNQLQ
Subjt:  NVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ

KAG7027736.1 Regulation of nuclear pre-mRNA domain-containing protein 1B, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-6695.8Show/hide
Query:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQE
        MLGKNPPPLP+SNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNAS+AQGTQPRSALLD+LQEQE
Subjt:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQE

Query:  NVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ
        NV+QQCIGQLE+VEATRASLVSLL+EALQDQESKLELVRNQLQ
Subjt:  NVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ

XP_022939586.1 regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita moschata]1.4e-6695.8Show/hide
Query:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQE
        MLGKNPPPLP+SNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNAS+AQGTQPRSALLD+LQEQE
Subjt:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQE

Query:  NVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ
        NV+QQCIGQLE+VEATRASLVSLL+EALQDQESKLELVRNQLQ
Subjt:  NVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ

XP_022971617.1 regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita maxima]1.4e-6695.8Show/hide
Query:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQE
        MLGKNPPPLP+SNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNAS+AQGTQPRSALLD+LQEQE
Subjt:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQE

Query:  NVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ
        NV+QQCIGQLE+VEATRASLVSLL+EALQDQESKLELVRNQLQ
Subjt:  NVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ

XP_023539267.1 regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita pepo subsp. pepo]3.2e-6695.1Show/hide
Query:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQE
        MLGKNPPPLP+SNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNAS+AQGTQPRSALLD+LQEQE
Subjt:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQE

Query:  NVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ
        NV+QQCIGQLE+VEATR+SLVSLL+EALQDQESKLELVRNQLQ
Subjt:  NVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ

TrEMBL top hitse value%identityAlignment
A0A1S3B7H0 regulation of nuclear pre-mRNA domain-containing protein 1B-like1.8e-6292.41Show/hide
Query:  MLGKNPP--PLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQE
        MLGKNPP  PLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLN SLAQGTQPRS LLD+LQ+
Subjt:  MLGKNPP--PLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQE

Query:  QENVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ
        QE VIQ+CI QLE VEATRASLVSLL+EALQDQESKLELVRNQLQ
Subjt:  QENVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ

A0A5D3DPK3 Regulation of nuclear pre-mRNA domain-containing protein 1B-like1.8e-6292.41Show/hide
Query:  MLGKNPP--PLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQE
        MLGKNPP  PLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLN SLAQGTQPRS LLD+LQ+
Subjt:  MLGKNPP--PLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQE

Query:  QENVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ
        QE VIQ+CI QLE VEATRASLVSLL+EALQDQESKLELVRNQLQ
Subjt:  QENVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ

A0A6J1DF20 regulation of nuclear pre-mRNA domain-containing protein 1B-like1.0e-6595.1Show/hide
Query:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQE
        MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNED ALNNCSSATHHLNQIEEDLNA+LAQGTQPRSALLD+LQEQE
Subjt:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQE

Query:  NVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ
        +VIQQCIGQLE+VEATR SLVSLL+EALQDQESKLELVRNQLQ
Subjt:  NVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ

A0A6J1FGC3 regulation of nuclear pre-mRNA domain-containing protein 1B-like7.0e-6795.8Show/hide
Query:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQE
        MLGKNPPPLP+SNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNAS+AQGTQPRSALLD+LQEQE
Subjt:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQE

Query:  NVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ
        NV+QQCIGQLE+VEATRASLVSLL+EALQDQESKLELVRNQLQ
Subjt:  NVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ

A0A6J1I2G4 regulation of nuclear pre-mRNA domain-containing protein 1B-like7.0e-6795.8Show/hide
Query:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQE
        MLGKNPPPLP+SNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNAS+AQGTQPRSALLD+LQEQE
Subjt:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQE

Query:  NVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ
        NV+QQCIGQLE+VEATRASLVSLL+EALQDQESKLELVRNQLQ
Subjt:  NVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G26990.1 ENTH/VHS family protein1.2e-1336.8Show/hide
Query:  RDAHSVRIKLAV------GGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQENVIQQCIGQLETVEATRA
        R+ + V +KL+V      G   EK+++A + +    ++EDA +   ++A  +L +  +++   L+ G  P  A++ ELQ Q  +++ CI QL  +E +R 
Subjt:  RDAHSVRIKLAV------GGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQENVIQQCIGQLETVEATRA

Query:  SLVSLLLEALQDQESKLELVRNQLQ
        SL+S L EALQ+QE KLE VRN LQ
Subjt:  SLVSLLLEALQDQESKLELVRNQLQ

AT5G10060.1 ENTH/VHS family protein2.0e-1839.04Show/hide
Query:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLA-VGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLN--ASLAQGTQPRSALLDELQ
        MLG++ P     + K     K  KR++ S R KLA  GGV EKI +A+  V+ E+ NE+A +N C SA   + ++E+D+    S A+    R +L  EL+
Subjt:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLA-VGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLN--ASLAQGTQPRSALLDELQ

Query:  EQENVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ
        E+E +++QCI +L++V+ +R+SLV+ L +AL++QES+L+ ++ Q+Q
Subjt:  EQENVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ

AT5G65180.1 ENTH/VHS family protein4.4e-2139.58Show/hide
Query:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPR-SALLDELQEQ
        ML +  PP    + K     K  KRD+ S + KL+ GGV EKI++AF  V  E+ NE+  +N C SA   + ++E+D+  + +    PR  +L  EL+E+
Subjt:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPR-SALLDELQEQ

Query:  ENVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ
        EN+++Q + +L++VE +R SLV+ L EAL++QES+LE +++Q+Q
Subjt:  ENVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ

AT5G65180.2 ENTH/VHS family protein4.4e-2139.58Show/hide
Query:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPR-SALLDELQEQ
        ML +  PP    + K     K  KRD+ S + KL+ GGV EKI++AF  V  E+ NE+  +N C SA   + ++E+D+  + +    PR  +L  EL+E+
Subjt:  MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPR-SALLDELQEQ

Query:  ENVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ
        EN+++Q + +L++VE +R SLV+ L EAL++QES+LE +++Q+Q
Subjt:  ENVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGGTAAAAATCCACCTCCATTACCCAGCAGCAATGGGAAGAGTTCAAATCCTATAAAAATAGTGAAGAGGGATGCCCACTCTGTGAGAATTAAACTGGCTGTTGG
AGGTGTTCCAGAAAAGATTCTTACTGCATTTCAATCTGTACTTGATGAACATCTAAATGAAGATGCTGCTCTGAACAACTGTAGTTCTGCTACTCATCATCTGAATCAAA
TTGAGGAAGATTTAAATGCCTCCCTAGCTCAAGGAACTCAACCAAGGTCTGCATTGCTGGACGAACTTCAAGAGCAGGAAAATGTAATTCAACAATGTATTGGGCAACTC
GAAACTGTTGAGGCAACTAGGGCTTCTTTGGTATCCTTGCTTCTAGAAGCGCTTCAGGACCAAGAATCAAAGCTGGAACTAGTTCGCAATCAGTTGCAGGATAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCGGTAAAAATCCACCTCCATTACCCAGCAGCAATGGGAAGAGTTCAAATCCTATAAAAATAGTGAAGAGGGATGCCCACTCTGTGAGAATTAAACTGGCTGTTGG
AGGTGTTCCAGAAAAGATTCTTACTGCATTTCAATCTGTACTTGATGAACATCTAAATGAAGATGCTGCTCTGAACAACTGTAGTTCTGCTACTCATCATCTGAATCAAA
TTGAGGAAGATTTAAATGCCTCCCTAGCTCAAGGAACTCAACCAAGGTCTGCATTGCTGGACGAACTTCAAGAGCAGGAAAATGTAATTCAACAATGTATTGGGCAACTC
GAAACTGTTGAGGCAACTAGGGCTTCTTTGGTATCCTTGCTTCTAGAAGCGCTTCAGGACCAAGAATCAAAGCTGGAACTAGTTCGCAATCAGTTGCAGGATAACTAG
Protein sequenceShow/hide protein sequence
MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQENVIQQCIGQL
ETVEATRASLVSLLLEALQDQESKLELVRNQLQDN