; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026448 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026448
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:36986428..36986859
RNA-Seq ExpressionLag0026448
SyntenyLag0026448
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143648.1 uncharacterized protein LOC111013509 [Momordica charantia]3.9e-4075.21Show/hide
Query:  LKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQEDSETEAELNDEEFAYLTKKF
        + GLGK YTT+ENVRKILR LPKSWE KVT IQEAKDLSKLPLEE +GSLMTHEI+MK N+EEDVKKKKSLALKST  Q  SE+E ELN+EE AYL+KKF
Subjt:  LKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQEDSETEAELNDEEFAYLTKKF

Query:  KKHFRKRNFSKKVNNQEDDSE
        KKHF+KR+F KK N+Q+   E
Subjt:  KKHFRKRNFSKKVNNQEDDSE

XP_022931810.1 uncharacterized protein LOC111438099 [Cucurbita moschata]9.0e-3764.75Show/hide
Query:  MDANETISEMFTRFTNIVNALKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQE
        M+ NE I +MFTRFTNI+NALK LGK Y+TSENVRKILR LPKSWEAKVT IQEAKDL+KLPL+E VGSLMTHEI M  ++EE+ KKKKS+ALKS +V  
Subjt:  MDANETISEMFTRFTNIVNALKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQE

Query:  DSETEAELNDEEFAYLTKKFKKHF-RKRNFSKKVNNQED
        DSE E  L++++ AY T+K+K    RK+ F K   NQ++
Subjt:  DSETEAELNDEEFAYLTKKFKKHF-RKRNFSKKVNNQED

XP_031739764.1 uncharacterized protein LOC116403291 [Cucumis sativus]7.4e-3966.93Show/hide
Query:  MDANETISEMFTRFTNIVNALKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQE
        MDANETI++MFTRFTNI+NALKGLGK YTTSENVRKILR LPK+WEAKVT IQEAKDL+KLPLEE +GSLMTHEIIMK ++E++ KKKKS+ALK+  ++ 
Subjt:  MDANETISEMFTRFTNIVNALKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQE

Query:  DSETEAELNDEEFAYLTKKFKKHFRKR
        D E E  L++++ AY ++K+K   +++
Subjt:  DSETEAELNDEEFAYLTKKFKKHFRKR

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]1.9e-3962.41Show/hide
Query:  MDANETISEMFTRFTNIVNALKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQE
        MDANETI++MFTRFTNI+NALKGLGK YTTSENVRKILR LPK+WEAKVT IQEAKDL+KLPLEE +GSLMTHEIIMK ++E++ KKKKS+ALK+  ++ 
Subjt:  MDANETISEMFTRFTNIVNALKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQE

Query:  DSETEAELNDEEFAYLTKKFKKHFRKRNFSKKVNNQEDDSE
        D E E  L++++ AY ++K+K   +++ + KK  + + +S+
Subjt:  DSETEAELNDEEFAYLTKKFKKHFRKRNFSKKVNNQEDDSE

XP_038895919.1 uncharacterized protein LOC120084093 [Benincasa hispida]1.5e-6091.61Show/hide
Query:  MDANETISEMFTRFTNIVNALKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQE
        MDANETISEMFTRFTNIVN LKGLGKSYTTSENVRKILR LPKSWEAKVT IQEAKDLSKLPLEE VGSLM HEIIMKANVEEDVKKKK+L LKSTQVQE
Subjt:  MDANETISEMFTRFTNIVNALKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQE

Query:  DSETEAELNDEEFAYLTKKFKKHFRKRNFSKKVNNQEDDSEHS
        DSETEAELNDEEFAYL KKFKKHFRKRNFSKKVNNQE   E S
Subjt:  DSETEAELNDEEFAYLTKKFKKHFRKRNFSKKVNNQEDDSEHS

TrEMBL top hitse value%identityAlignment
A0A2N9I560 CCHC-type domain-containing protein9.7e-2955.78Show/hide
Query:  MDANETISEMFTRFTNIVNALKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANV-EEDVKKKKSLALKSTQVQ
        M  +E ISEM TRFTNIVN+LK LGK YT  ENVRKILR LPK WEAK+T I EA+DL  L LEE  GSLMT+E+ M + V EE+VK KK+LALKS+   
Subjt:  MDANETISEMFTRFTNIVNALKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANV-EEDVKKKKSLALKSTQVQ

Query:  EDSETEAELNDEEFAYLTKKFKKHFRK-----RNFSKKVNNQEDDSE
         D+  E    +EE A +T+ FKK  +K     R FSKK  N+ + S+
Subjt:  EDSETEAELNDEEFAYLTKKFKKHFRK-----RNFSKKVNNQEDDSE

A0A5D3DLU8 UBN2 domain-containing protein9.1e-3560.31Show/hide
Query:  MDANETISEMFTRFTNIVNALKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQE
        MDANETI+++FTRFTNI+NALK LGK YTTSEN RKILR LPK+WEAKV  IQEAK   KLPLEE +GSLMTHEII+K ++E++ KKKKS+ALK+  ++ 
Subjt:  MDANETISEMFTRFTNIVNALKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQE

Query:  DSETEAELNDEEFAYLTKKFKKHFRKRNFSK
        D + E +L++++ AY ++K+K   + +N S+
Subjt:  DSETEAELNDEEFAYLTKKFKKHFRKRNFSK

A0A6J1CR79 uncharacterized protein LOC1110135091.9e-4075.21Show/hide
Query:  LKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQEDSETEAELNDEEFAYLTKKF
        + GLGK YTT+ENVRKILR LPKSWE KVT IQEAKDLSKLPLEE +GSLMTHEI+MK N+EEDVKKKKSLALKST  Q  SE+E ELN+EE AYL+KKF
Subjt:  LKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQEDSETEAELNDEEFAYLTKKF

Query:  KKHFRKRNFSKKVNNQEDDSE
        KKHF+KR+F KK N+Q+   E
Subjt:  KKHFRKRNFSKKVNNQEDDSE

A0A6J1F0H1 uncharacterized protein LOC1114380994.4e-3764.75Show/hide
Query:  MDANETISEMFTRFTNIVNALKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQE
        M+ NE I +MFTRFTNI+NALK LGK Y+TSENVRKILR LPKSWEAKVT IQEAKDL+KLPL+E VGSLMTHEI M  ++EE+ KKKKS+ALKS +V  
Subjt:  MDANETISEMFTRFTNIVNALKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQE

Query:  DSETEAELNDEEFAYLTKKFKKHF-RKRNFSKKVNNQED
        DSE E  L++++ AY T+K+K    RK+ F K   NQ++
Subjt:  DSETEAELNDEEFAYLTKKFKKHF-RKRNFSKKVNNQED

A0A6J1I2X4 uncharacterized protein LOC1114704653.1e-3569.17Show/hide
Query:  MDANETISEMFTRFTNIVNALKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQE
        M+ NE I +MFTRFTNI+NALK LGK Y+TSENVRKILR LPKSWEAKVT IQEAKDL+KLPL+E VGSLMTHEI M  ++EE+ KKKKS+ALKS +V  
Subjt:  MDANETISEMFTRFTNIVNALKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQE

Query:  DSETEAELNDEEFAYLTKKF
        DSE E  L++++ AY T+K+
Subjt:  DSETEAELNDEEFAYLTKKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCAAATGAAACAATATCTGAAATGTTTACTAGGTTCACTAATATTGTTAATGCTTTGAAGGGATTAGGAAAATCCTATACCACCTCTGAAAATGTGAGAAAAAT
TCTTAGACCATTGCCTAAGAGTTGGGAAGCTAAGGTGACGACAATCCAAGAAGCAAAAGACCTCTCAAAACTTCCACTAGAGGAGTTCGTTGGATCTCTCATGACGCATG
AGATAATCATGAAGGCCAATGTGGAAGAAGATGTCAAAAAGAAGAAGAGCCTAGCATTAAAGTCCACTCAAGTTCAAGAGGACTCTGAAACTGAAGCTGAACTAAATGAT
GAGGAGTTCGCCTACTTGACCAAAAAGTTCAAAAAGCACTTTAGGAAAAGGAACTTCTCAAAGAAAGTCAACAATCAAGAAGATGATAGCGAGCATAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGCAAATGAAACAATATCTGAAATGTTTACTAGGTTCACTAATATTGTTAATGCTTTGAAGGGATTAGGAAAATCCTATACCACCTCTGAAAATGTGAGAAAAAT
TCTTAGACCATTGCCTAAGAGTTGGGAAGCTAAGGTGACGACAATCCAAGAAGCAAAAGACCTCTCAAAACTTCCACTAGAGGAGTTCGTTGGATCTCTCATGACGCATG
AGATAATCATGAAGGCCAATGTGGAAGAAGATGTCAAAAAGAAGAAGAGCCTAGCATTAAAGTCCACTCAAGTTCAAGAGGACTCTGAAACTGAAGCTGAACTAAATGAT
GAGGAGTTCGCCTACTTGACCAAAAAGTTCAAAAAGCACTTTAGGAAAAGGAACTTCTCAAAGAAAGTCAACAATCAAGAAGATGATAGCGAGCATAGCTAG
Protein sequenceShow/hide protein sequence
MDANETISEMFTRFTNIVNALKGLGKSYTTSENVRKILRPLPKSWEAKVTTIQEAKDLSKLPLEEFVGSLMTHEIIMKANVEEDVKKKKSLALKSTQVQEDSETEAELND
EEFAYLTKKFKKHFRKRNFSKKVNNQEDDSEHS