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Lag0026463 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026463
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr10:37284902..37285990
RNA-Seq ExpressionLag0026463
SyntenyLag0026463
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055624.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]8.2e-1432.16Show/hide
Query:  SNDHDIW------RTILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTI
        SN+  +W      + +LN+CNN +  ME++HYMY++PI  P P +RR   VQE D    E++ +H             E++PP TQT       +P+M +
Subjt:  SNDHDIW------RTILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTI

Query:  LPPSTLYLHTLIPPS------WHDYEAGPSS--------------SSTHGRGRGRGRGEHAQYVY---PTELVEEPRE---------------------Q
            T Y  + +  S      +++ EAG SS              SS++  G GRGRGEH +Y+Y   P  + E+  E                     Q
Subjt:  LPPSTLYLHTLIPPS------WHDYEAGPSS--------------SSTHGRGRGRGRGEHAQYVY---PTELVEEPRE---------------------Q

Query:  EDPYDQVSRGRRWQPARNPLRPPCGTH
        E+   Q  + RR QPARN  RP CGTH
Subjt:  EDPYDQVSRGRRWQPARNPLRPPCGTH

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.7e-1533.33Show/hide
Query:  DIWRTILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTILPPSTLYLHT
        D  +  L++CNN +  ME +H MY++PI PP P  R   RV+E ++               ++ +HNVE++P  TQT    G  +PM  +      Y   
Subjt:  DIWRTILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTILPPSTLYLHT

Query:  LIPPSWHDYEAGPSS-------SSTHGRGRGRGRGEHAQYVY---------PTELVEEPREQEDPYDQVSRGRRWQPARNPLRPPCGTH
         +   ++D   GPSS       S+++  G  RG GEH +Y+Y           E  +EP  QED      + RR QP RN  RP CGTH
Subjt:  LIPPSWHDYEAGPSS-------SSTHGRGRGRGRGEHAQYVY---------PTELVEEPREQEDPYDQVSRGRRWQPARNPLRPPCGTH

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.4e-1332.55Show/hide
Query:  ILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTILPPSTLYLHTLIPPS
        +LN+CN+ +  ME++HYMY++PI  P P +RR   VQE D    E++ +H             E++PP TQT       +P+M +    T Y  + +  S
Subjt:  ILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTILPPSTLYLHTLIPPS

Query:  ------WHDYEAGPSS--------------SSTHGRGRGRGRGEHAQYVY---PTELVEEPRE---------------------QEDPYDQVSRGRRWQP
              +++ EAG SS              SS++  G GRGRGEH +Y+Y   P  + E+  E                     QE+   Q  + RR QP
Subjt:  ------WHDYEAGPSS--------------SSTHGRGRGRGRGEHAQYVY---PTELVEEPRE---------------------QEDPYDQVSRGRRWQP

Query:  ARNPLRPPCGTH
        ARN  RP CGTH
Subjt:  ARNPLRPPCGTH

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]8.2e-1432.8Show/hide
Query:  DIWRTILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTILPPSTLYLHT
        D  +  L++CNN +  ME +H MY++PI PP P  R   RV+E ++               ++ +HNVE++P  TQT    G  +PM  +      Y   
Subjt:  DIWRTILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTILPPSTLYLHT

Query:  LIPPSWHDYEAGPSS-------SSTHGRGRGRGRGEHAQYVY---------PTELVEEPREQEDPYDQVSRGRRWQPARNPLRPPCGTH
         +   ++D   GPSS       S+++  G  RG GEH +Y+Y           E  +EP  QED      + RR QP RN   P CGTH
Subjt:  LIPPSWHDYEAGPSS-------SSTHGRGRGRGRGEHAQYVY---------PTELVEEPREQEDPYDQVSRGRRWQPARNPLRPPCGTH

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.5e-1534.78Show/hide
Query:  ILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTILPPSTLYLHTLIPPS
        +L++CNN +  ME +H +Y++PI PP P  R   RV+E ++               +E +HNVE++PP TQT    G  +PM  +      Y  + +   
Subjt:  ILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTILPPSTLYLHTLIPPS

Query:  WHDYEAGPSS-------SSTHGRGRGRGRGEHAQYVY---PT------ELVEEPREQEDPYDQVSRGRRWQPARNPLRPPCGTH
        ++D   GP S       S+++  G GRG GEH +Y+Y   PT      E  +EP+ QED      + RR QPARN     CGTH
Subjt:  WHDYEAGPSS-------SSTHGRGRGRGRGEHAQYVY---PT------ELVEEPREQEDPYDQVSRGRRWQPARNPLRPPCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein4.0e-1432.16Show/hide
Query:  SNDHDIW------RTILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTI
        SN+  +W      + +LN+CNN +  ME++HYMY++PI  P P +RR   VQE D    E++ +H             E++PP TQT       +P+M +
Subjt:  SNDHDIW------RTILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTI

Query:  LPPSTLYLHTLIPPS------WHDYEAGPSS--------------SSTHGRGRGRGRGEHAQYVY---PTELVEEPRE---------------------Q
            T Y  + +  S      +++ EAG SS              SS++  G GRGRGEH +Y+Y   P  + E+  E                     Q
Subjt:  LPPSTLYLHTLIPPS------WHDYEAGPSS--------------SSTHGRGRGRGRGEHAQYVY---PTELVEEPRE---------------------Q

Query:  EDPYDQVSRGRRWQPARNPLRPPCGTH
        E+   Q  + RR QPARN  RP CGTH
Subjt:  EDPYDQVSRGRRWQPARNPLRPPCGTH

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.8e-1533.33Show/hide
Query:  DIWRTILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTILPPSTLYLHT
        D  +  L++CNN +  ME +H MY++PI PP P  R   RV+E ++               ++ +HNVE++P  TQT    G  +PM  +      Y   
Subjt:  DIWRTILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTILPPSTLYLHT

Query:  LIPPSWHDYEAGPSS-------SSTHGRGRGRGRGEHAQYVY---------PTELVEEPREQEDPYDQVSRGRRWQPARNPLRPPCGTH
         +   ++D   GPSS       S+++  G  RG GEH +Y+Y           E  +EP  QED      + RR QP RN  RP CGTH
Subjt:  LIPPSWHDYEAGPSS-------SSTHGRGRGRGRGEHAQYVY---------PTELVEEPREQEDPYDQVSRGRRWQPARNPLRPPCGTH

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.2e-1332.55Show/hide
Query:  ILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTILPPSTLYLHTLIPPS
        +LN+CN+ +  ME++HYMY++PI  P P +RR   VQE D    E++ +H             E++PP TQT       +P+M +    T Y  + +  S
Subjt:  ILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTILPPSTLYLHTLIPPS

Query:  ------WHDYEAGPSS--------------SSTHGRGRGRGRGEHAQYVY---PTELVEEPRE---------------------QEDPYDQVSRGRRWQP
              +++ EAG SS              SS++  G GRGRGEH +Y+Y   P  + E+  E                     QE+   Q  + RR QP
Subjt:  ------WHDYEAGPSS--------------SSTHGRGRGRGRGEHAQYVY---PTELVEEPRE---------------------QEDPYDQVSRGRRWQP

Query:  ARNPLRPPCGTH
        ARN  RP CGTH
Subjt:  ARNPLRPPCGTH

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X24.0e-1432.8Show/hide
Query:  DIWRTILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTILPPSTLYLHT
        D  +  L++CNN +  ME +H MY++PI PP P  R   RV+E ++               ++ +HNVE++P  TQT    G  +PM  +      Y   
Subjt:  DIWRTILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTILPPSTLYLHT

Query:  LIPPSWHDYEAGPSS-------SSTHGRGRGRGRGEHAQYVY---------PTELVEEPREQEDPYDQVSRGRRWQPARNPLRPPCGTH
         +   ++D   GPSS       S+++  G  RG GEH +Y+Y           E  +EP  QED      + RR QP RN   P CGTH
Subjt:  LIPPSWHDYEAGPSS-------SSTHGRGRGRGRGEHAQYVY---------PTELVEEPREQEDPYDQVSRGRRWQPARNPLRPPCGTH

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein7.3e-1634.78Show/hide
Query:  ILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTILPPSTLYLHTLIPPS
        +L++CNN +  ME +H +Y++PI PP P  R   RV+E ++               +E +HNVE++PP TQT    G  +PM  +      Y  + +   
Subjt:  ILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTILPPSTLYLHTLIPPS

Query:  WHDYEAGPSS-------SSTHGRGRGRGRGEHAQYVY---PT------ELVEEPREQEDPYDQVSRGRRWQPARNPLRPPCGTH
        ++D   GP S       S+++  G GRG GEH +Y+Y   PT      E  +EP+ QED      + RR QPARN     CGTH
Subjt:  WHDYEAGPSS-------SSTHGRGRGRGRGEHAQYVY---PT------ELVEEPREQEDPYDQVSRGRRWQPARNPLRPPCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTTTACCTCCTTACTGTAGCAATGATCATGACATTTGGCGAACAATCTTAAATTTGTGCAACAATGGTGATGTCAATATGGAGCATCTCCATTATATGTATAA
CATACCTATTGCACCTCCTGGACCTAGGCGTAGAAGAGGTGCTCGTGTCCAAGAAGATGATGTTCCAGTACAAGAGGATATTTCGGAGCATTTCCCACTAGTTGTACCGG
AAGAATTTCACCACAATGTTGAAGACATGCCTCCTTTTACTCAAACGCATGATGGTGCTGGTCCATCCACTCCAATGATGACGATACTGCCCCCTAGTACTCTATACCTT
CACACACTAATTCCACCATCATGGCATGATTATGAGGCTGGTCCTTCATCGTCATCTACTCACGGACGTGGACGTGGACGTGGACGTGGAGAGCATGCACAATATGTATA
CCCTACAGAGCTTGTAGAGGAACCCAGGGAACAAGAGGATCCATATGATCAGGTATCGAGGGGTCGTCGTTGGCAACCAGCTCGTAATCCGCTACGTCCGCCTTGTGGCA
CACATTTGTCATATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTTTACCTCCTTACTGTAGCAATGATCATGACATTTGGCGAACAATCTTAAATTTGTGCAACAATGGTGATGTCAATATGGAGCATCTCCATTATATGTATAA
CATACCTATTGCACCTCCTGGACCTAGGCGTAGAAGAGGTGCTCGTGTCCAAGAAGATGATGTTCCAGTACAAGAGGATATTTCGGAGCATTTCCCACTAGTTGTACCGG
AAGAATTTCACCACAATGTTGAAGACATGCCTCCTTTTACTCAAACGCATGATGGTGCTGGTCCATCCACTCCAATGATGACGATACTGCCCCCTAGTACTCTATACCTT
CACACACTAATTCCACCATCATGGCATGATTATGAGGCTGGTCCTTCATCGTCATCTACTCACGGACGTGGACGTGGACGTGGACGTGGAGAGCATGCACAATATGTATA
CCCTACAGAGCTTGTAGAGGAACCCAGGGAACAAGAGGATCCATATGATCAGGTATCGAGGGGTCGTCGTTGGCAACCAGCTCGTAATCCGCTACGTCCGCCTTGTGGCA
CACATTTGTCATATTAG
Protein sequenceShow/hide protein sequence
MATLPPYCSNDHDIWRTILNLCNNGDVNMEHLHYMYNIPIAPPGPRRRRGARVQEDDVPVQEDISEHFPLVVPEEFHHNVEDMPPFTQTHDGAGPSTPMMTILPPSTLYL
HTLIPPSWHDYEAGPSSSSTHGRGRGRGRGEHAQYVYPTELVEEPREQEDPYDQVSRGRRWQPARNPLRPPCGTHLSY