; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026484 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026484
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr10:37682241..37684494
RNA-Seq ExpressionLag0026484
SyntenyLag0026484
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]4.7e-3744.55Show/hide
Query:  VLQATSSPSTTNLPLVAREGQPGESLHDYITRFNEKALQVEGYSDGAALVVVITGLEDERLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKREHK
        +L    SP T     + RE +  ESLHDY+TRFN++ LQVEG +D  +L+  I G+ DE L  S  K  P T++E +SRAQ+YMSA E   SKR      
Subjt:  VLQATSSPSTTNLPLVAREGQPGESLHDYITRFNEKALQVEGYSDGAALVVVITGLEDERLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKREHK

Query:  RHSSFDQERKKEKRQRTDNGSRGRGDHDHGRD---QAHLFGKFEKYTSAVIPQEQVLMEIRNTGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQ
             + +R  +KR+R  +G + +G     RD   Q     KFEKYTS  +P EQVLMEI+N   LK+P+RM ++  ++ K  YCLFH DH H+T++C  
Subjt:  RHSSFDQERKKEKRQRTDNGSRGRGDHDHGRD---QAHLFGKFEKYTSAVIPQEQVLMEIRNTGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQ

Query:  LKDEIEALIQNGYLKEFIVE
        LK+E+E LI  GYLKE++ E
Subjt:  LKDEIEALIQNGYLKEFIVE

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]6.2e-3740.23Show/hide
Query:  AESVRCRLVPTAFGRFGFAWF-DLKRLRIPKNPRRMNMF-TVLQATSSPSTTNLPLVAREGQPGESLHDYITRFNEKALQVEGYSDGAALVVVITGLEDE
        +E+VRCR+  T        WF  LKR  I         F T        S     L+  + +  ESL DY+ RFNE+ LQVEG +D  +L+  ++G+ DE
Subjt:  AESVRCRLVPTAFGRFGFAWF-DLKRLRIPKNPRRMNMF-TVLQATSSPSTTNLPLVAREGQPGESLHDYITRFNEKALQVEGYSDGAALVVVITGLEDE

Query:  RLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKREHKRHSSFDQERKKEKRQRTDNGSRGRGDHDHGRDQAHLFG---KFEKYTSAVIPQEQVLME
         L  S  K  P T++E +SRAQ+YMSA E   SKR           D +R   KR+R  +G + +G     RD++       KFEKYT   +P EQVLME
Subjt:  RLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKREHKRHSSFDQERKKEKRQRTDNGSRGRGDHDHGRDQAHLFG---KFEKYTSAVIPQEQVLME

Query:  IRNTGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQLKDEIEALIQNGYLKEFIVE
        I++   LK+P+RMK++  ++ K  YCLFH DH H+T++C  LK+E+E LI+ GYLKE++ E
Subjt:  IRNTGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQLKDEIEALIQNGYLKEFIVE

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]2.7e-3243.15Show/hide
Query:  ESLHDYITRFNEKALQVEGYSDGAALVVVITGLEDERLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKREHKRHSSFDQERKKEKRQRTDNGSRG
        ESLHDY+ RFN++ LQ+E  +D  +L+  ++G+ DE L  S  K  P T++E +SRAQ+YMSA E   SKR           D +R  +KR+R  +G + 
Subjt:  ESLHDYITRFNEKALQVEGYSDGAALVVVITGLEDERLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKREHKRHSSFDQERKKEKRQRTDNGSRG

Query:  RGDHDHGRDQAHLFG---KFEKYTSAVIPQEQVLMEIRNTGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQLKDEIEALIQNGYLKEFIVE
        +G     RD++       KFEKYT   +P EQVLMEI++   LK+P+RMK    ++ K  YCLFH DH H+T++   LK+E+E LI+ GYL+E++ E
Subjt:  RGDHDHGRDQAHLFG---KFEKYTSAVIPQEQVLMEIRNTGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQLKDEIEALIQNGYLKEFIVE

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]3.1e-2832.03Show/hide
Query:  AESVRCRLVPTAFGRFGFAWFDLKRLRIPKNPRRMNMFTVLQATSSPSTTNLPLVAREGQP-----------GESLHDYITRFNEKALQVEGYSDGAALV
        ++++ CR  P         WF  +RL+    P  ++ F  L   S   T++     + G+P           GE+L DYI R+N +  QV+GY DG AL 
Subjt:  AESVRCRLVPTAFGRFGFAWFDLKRLRIPKNPRRMNMFTVLQATSSPSTTNLPLVAREGQP-----------GESLHDYITRFNEKALQVEGYSDGAALV

Query:  VVITGLEDERLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKREHKRHSSFDQERKKEKR-QRTDNGSRGR----GDHDHGRD-QAHLFGKFEKYT
         ++ GL   +L  S+SK  P +Y+E ++RA+KY +AEE  K++  ++         ++ ++E+R  R D   R      G+    RD +  L  +F  +T
Subjt:  VVITGLEDERLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKREHKRHSSFDQERKKEKR-QRTDNGSRGR----GDHDHGRD-QAHLFGKFEKYT

Query:  SAVIPQEQVLMEIRNTGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQLKDEIEALIQNGYLKEFIVETEIEVEAD
            P+EQ+LM++RN    + P  MK+NP R++ + YC FH DH H T  C +LK++IE+L++ G L+E++   E  V+++
Subjt:  SAVIPQEQVLMEIRNTGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQLKDEIEALIQNGYLKEFIVETEIEVEAD

XP_024042801.1 uncharacterized protein LOC112099618 [Citrus clementina]6.0e-3241.06Show/hide
Query:  LVAREGQPGESLHDYITRFNEKALQVEGYSDGAALVVVITGLEDERLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKRE------HKRHSSFDQE
        L+ ++G+  ESL D ITRFN++ ++VE YSD  AL  ++ GL+  +   S++KN  RT+ E +SRAQKY + +EL  +KR           KR    +Q 
Subjt:  LVAREGQPGESLHDYITRFNEKALQVEGYSDGAALVVVITGLEDERLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKRE------HKRHSSFDQE

Query:  RKKEKRQRTDNGSRGRGDHDHGRDQAHLFGKFEKYTSAVIPQEQVLMEIRNTGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQLKDEIEALIQN
        + KEK  R +            +    L  +F +YT   +P+EQVLM+IRN   L+ PK +K  P R+D+S YC +H DHRH+ ++C  LK+EI++LIQ 
Subjt:  RKKEKRQRTDNGSRGRGDHDHGRDQAHLFGKFEKYTSAVIPQEQVLMEIRNTGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQLKDEIEALIQN

Query:  GYLKEFI
        GYLKEF+
Subjt:  GYLKEFI

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128052.3e-3744.55Show/hide
Query:  VLQATSSPSTTNLPLVAREGQPGESLHDYITRFNEKALQVEGYSDGAALVVVITGLEDERLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKREHK
        +L    SP T     + RE +  ESLHDY+TRFN++ LQVEG +D  +L+  I G+ DE L  S  K  P T++E +SRAQ+YMSA E   SKR      
Subjt:  VLQATSSPSTTNLPLVAREGQPGESLHDYITRFNEKALQVEGYSDGAALVVVITGLEDERLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKREHK

Query:  RHSSFDQERKKEKRQRTDNGSRGRGDHDHGRD---QAHLFGKFEKYTSAVIPQEQVLMEIRNTGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQ
             + +R  +KR+R  +G + +G     RD   Q     KFEKYTS  +P EQVLMEI+N   LK+P+RM ++  ++ K  YCLFH DH H+T++C  
Subjt:  RHSSFDQERKKEKRQRTDNGSRGRGDHDHGRD---QAHLFGKFEKYTSAVIPQEQVLMEIRNTGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQ

Query:  LKDEIEALIQNGYLKEFIVE
        LK+E+E LI  GYLKE++ E
Subjt:  LKDEIEALIQNGYLKEFIVE

A0A6J1DWY0 uncharacterized protein LOC1110252933.0e-3740.23Show/hide
Query:  AESVRCRLVPTAFGRFGFAWF-DLKRLRIPKNPRRMNMF-TVLQATSSPSTTNLPLVAREGQPGESLHDYITRFNEKALQVEGYSDGAALVVVITGLEDE
        +E+VRCR+  T        WF  LKR  I         F T        S     L+  + +  ESL DY+ RFNE+ LQVEG +D  +L+  ++G+ DE
Subjt:  AESVRCRLVPTAFGRFGFAWF-DLKRLRIPKNPRRMNMF-TVLQATSSPSTTNLPLVAREGQPGESLHDYITRFNEKALQVEGYSDGAALVVVITGLEDE

Query:  RLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKREHKRHSSFDQERKKEKRQRTDNGSRGRGDHDHGRDQAHLFG---KFEKYTSAVIPQEQVLME
         L  S  K  P T++E +SRAQ+YMSA E   SKR           D +R   KR+R  +G + +G     RD++       KFEKYT   +P EQVLME
Subjt:  RLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKREHKRHSSFDQERKKEKRQRTDNGSRGRGDHDHGRDQAHLFG---KFEKYTSAVIPQEQVLME

Query:  IRNTGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQLKDEIEALIQNGYLKEFIVE
        I++   LK+P+RMK++  ++ K  YCLFH DH H+T++C  LK+E+E LI+ GYLKE++ E
Subjt:  IRNTGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQLKDEIEALIQNGYLKEFIVE

A0A6J1DYL6 uncharacterized protein LOC1110257851.3e-3243.15Show/hide
Query:  ESLHDYITRFNEKALQVEGYSDGAALVVVITGLEDERLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKREHKRHSSFDQERKKEKRQRTDNGSRG
        ESLHDY+ RFN++ LQ+E  +D  +L+  ++G+ DE L  S  K  P T++E +SRAQ+YMSA E   SKR           D +R  +KR+R  +G + 
Subjt:  ESLHDYITRFNEKALQVEGYSDGAALVVVITGLEDERLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKREHKRHSSFDQERKKEKRQRTDNGSRG

Query:  RGDHDHGRDQAHLFG---KFEKYTSAVIPQEQVLMEIRNTGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQLKDEIEALIQNGYLKEFIVE
        +G     RD++       KFEKYT   +P EQVLMEI++   LK+P+RMK    ++ K  YCLFH DH H+T++   LK+E+E LI+ GYL+E++ E
Subjt:  RGDHDHGRDQAHLFG---KFEKYTSAVIPQEQVLMEIRNTGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQLKDEIEALIQNGYLKEFIVE

A0A6J1E1B3 uncharacterized protein LOC1110255211.6e-2731.46Show/hide
Query:  ARAESVRCRLVPTAFGRFGFAWFDLKRLRIPKNPRRMNMFTVLQATSSPSTTNLPLVAREGQPGESLHDYITRFNEKALQVEGYSDGAALVVVITGLEDE
        A  ++++CR    A       W+     R+P      ++ T+ Q                 + GE+L +Y+TRF E+ L+V   SD +A+   +TGL DE
Subjt:  ARAESVRCRLVPTAFGRFGFAWFDLKRLRIPKNPRRMNMFTVLQATSSPSTTNLPLVAREGQPGESLHDYITRFNEKALQVEGYSDGAALVVVITGLEDE

Query:  RLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKREHKRHSSFDQERKKEKRQRTDNGSRGRG--------DHDHGRDQAHLFGKFEKYTSAVIPQE
         L   + +  P T+AE + +A+K +  +ELL++K  + E K     DQ R  + + + D+ S+ +G        D+       +    +E+YT   IP  
Subjt:  RLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKREHKRHSSFDQERKKEKRQRTDNGSRGRG--------DHDHGRDQAHLFGKFEKYTSAVIPQE

Query:  QVLMEIRNTG---FLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQLKDEIEALIQNGYLKEFI
        ++L  I  TG    LK PK+++ +PE+++K  YC FH DH H+T NC +LK +IE LIQ GY K+F+
Subjt:  QVLMEIRNTG---FLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQLKDEIEALIQNGYLKEFI

A0A7N2N9G0 Reverse transcriptase1.4e-2633.21Show/hide
Query:  AESVRCRLVPTAFGRFGFAWFDLKRLRIPKNPRRMNMFTVLQATSSP--------STTNLPLVAREGQPGESLHDYITRFNEKALQVEGYSDGAALVVVI
        A+++ CR  PT        WF   RL     P  +  F  L A  +           +   L++ + +  E+L  YI+RFN++AL V+   D   +    
Subjt:  AESVRCRLVPTAFGRFGFAWFDLKRLRIPKNPRRMNMFTVLQATSSP--------STTNLPLVAREGQPGESLHDYITRFNEKALQVEGYSDGAALVVVI

Query:  TGLEDERLLNSISKNQPRTYAEFVSRAQKYMSAEELL---KSKRSKREHKRHSSFDQERKKEKRQRTDNGSRGRGDHDHGRDQAHLFGKFEKYTSAVIPQ
         GL+  + L S+ KN P+T +E + RA KYM+AE+ L   + K  KRE +  +  DQ RKK +           GD    R    + G+F  +T    P 
Subjt:  TGLEDERLLNSISKNQPRTYAEFVSRAQKYMSAEELL---KSKRSKREHKRHSSFDQERKKEKRQRTDNGSRGRGDHDHGRDQAHLFGKFEKYTSAVIPQ

Query:  EQVLMEIRNTGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQLKDEIEALIQNGYLKEFI
        +QVLM+I++   L FP ++KS+P ++ +  YC FH DH H T +C  LK +IEALI+ G L+ F+
Subjt:  EQVLMEIRNTGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQLKDEIEALIQNGYLKEFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCGACCCATATGGTCGGCCTCGGCAAAAGGTCGAGGCCGACCATTCGGCCCGGTTGCGCGGGCCGAGTCCGTTCGATGTCGTTTGGTCCCCACCGCCTTTGGCCG
CTTCGGTTTCGCCTGGTTTGACCTAAAACGCCTCCGAATCCCAAAAAACCCTAGGAGGATGAACATGTTTACTGTCTTGCAGGCCACGTCTTCCCCCTCAACTACAAATT
TACCGTTGGTGGCACGTGAAGGTCAGCCAGGTGAGAGTCTGCACGATTATATAACTCGTTTTAATGAGAAAGCACTTCAGGTAGAAGGATACAGTGATGGAGCAGCTTTG
GTAGTTGTAATAACGGGTCTAGAAGACGAGAGACTGCTTAATTCGATAAGTAAGAACCAACCTCGAACCTATGCTGAGTTCGTTTCCAGGGCACAGAAGTACATGAGCGC
AGAGGAGTTGTTGAAATCAAAGAGATCAAAACGAGAGCACAAAAGGCATTCTTCATTCGACCAGGAAAGGAAAAAGGAGAAAAGACAACGAACAGACAATGGTAGTCGAG
GTCGAGGCGACCATGACCATGGCCGAGACCAAGCACATCTCTTTGGTAAGTTTGAGAAATATACATCAGCTGTTATTCCACAGGAGCAAGTTCTGATGGAGATTCGAAAC
ACGGGTTTTCTTAAATTCCCGAAGAGGATGAAGTCAAATCCTGAAAGAAAAGACAAGAGTCACTACTGTCTTTTCCACCTAGATCACAGGCATTCAACCAAAAATTGTAT
TCAATTGAAGGATGAAATCGAGGCACTAATCCAGAATGGATATCTAAAGGAGTTCATTGTTGAAACCGAGATCGAGGTCGAGGCCGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCCGACCCATATGGTCGGCCTCGGCAAAAGGTCGAGGCCGACCATTCGGCCCGGTTGCGCGGGCCGAGTCCGTTCGATGTCGTTTGGTCCCCACCGCCTTTGGCCG
CTTCGGTTTCGCCTGGTTTGACCTAAAACGCCTCCGAATCCCAAAAAACCCTAGGAGGATGAACATGTTTACTGTCTTGCAGGCCACGTCTTCCCCCTCAACTACAAATT
TACCGTTGGTGGCACGTGAAGGTCAGCCAGGTGAGAGTCTGCACGATTATATAACTCGTTTTAATGAGAAAGCACTTCAGGTAGAAGGATACAGTGATGGAGCAGCTTTG
GTAGTTGTAATAACGGGTCTAGAAGACGAGAGACTGCTTAATTCGATAAGTAAGAACCAACCTCGAACCTATGCTGAGTTCGTTTCCAGGGCACAGAAGTACATGAGCGC
AGAGGAGTTGTTGAAATCAAAGAGATCAAAACGAGAGCACAAAAGGCATTCTTCATTCGACCAGGAAAGGAAAAAGGAGAAAAGACAACGAACAGACAATGGTAGTCGAG
GTCGAGGCGACCATGACCATGGCCGAGACCAAGCACATCTCTTTGGTAAGTTTGAGAAATATACATCAGCTGTTATTCCACAGGAGCAAGTTCTGATGGAGATTCGAAAC
ACGGGTTTTCTTAAATTCCCGAAGAGGATGAAGTCAAATCCTGAAAGAAAAGACAAGAGTCACTACTGTCTTTTCCACCTAGATCACAGGCATTCAACCAAAAATTGTAT
TCAATTGAAGGATGAAATCGAGGCACTAATCCAGAATGGATATCTAAAGGAGTTCATTGTTGAAACCGAGATCGAGGTCGAGGCCGACTAG
Protein sequenceShow/hide protein sequence
MARPIWSASAKGRGRPFGPVARAESVRCRLVPTAFGRFGFAWFDLKRLRIPKNPRRMNMFTVLQATSSPSTTNLPLVAREGQPGESLHDYITRFNEKALQVEGYSDGAAL
VVVITGLEDERLLNSISKNQPRTYAEFVSRAQKYMSAEELLKSKRSKREHKRHSSFDQERKKEKRQRTDNGSRGRGDHDHGRDQAHLFGKFEKYTSAVIPQEQVLMEIRN
TGFLKFPKRMKSNPERKDKSHYCLFHLDHRHSTKNCIQLKDEIEALIQNGYLKEFIVETEIEVEAD