; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026500 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026500
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:37951762..37953038
RNA-Seq ExpressionLag0026500
SyntenyLag0026500
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]6.7e-4136Show/hide
Query:  MEDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFD
        M+++ +  ++   T +E+  V +  G  +L   +++LC V K+ +SK ++ +A R+VM S+W V  STR E LG NI+VI F S+ EK R+L +G WTF+
Subjt:  MEDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFD

Query:  KALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVTKSLPRVVRL--------------
        K+LLVL SP  ++ P  ++F+ C FW+Q+ +IPF  ++  +A  LG+ +G +EE+ G+G   W G  +RVR+ +DV+K L R ++L              
Subjt:  KALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVTKSLPRVVRL--------------

Query:  ---------CGRIGHSHRECPEVVSAAALDARFPFGDWLRASPLRRMSS--------RGS--GDGGRRSEGIGGR
                 CG+IGHS REC +       ++   +GDWLRA+ L++  S        RG   G G + + G GGR
Subjt:  ---------CGRIGHSHRECPEVVSAAALDARFPFGDWLRASPLRRMSS--------RGS--GDGGRRSEGIGGR

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]1.7e-2836.02Show/hide
Query:  MEDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFD
        M+++    +N  LT+E+   + + +   L+   ++Q  AV K+ +SK ++V+AFR+VM S+W V  ST IE+ G N++VI F S+ EK R+L +G W+F+
Subjt:  MEDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFD

Query:  KALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVTKSLPRVVRL
         +LLVL SP  +D P  ++F+    W+Q+  IPF+ +   +A+ LG+ +G +EE+   G  +W G  +RVR+ +D++K   R +++
Subjt:  KALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVTKSLPRVVRL

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.3e-3136.53Show/hide
Query:  MEDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFD
        M+D+    +N  L +EE   + +     +L   +IQLCAV K+  SK + V+AF +VM  +W +  STRIE+ G NI+VI F ++ EK+R+   G WTFD
Subjt:  MEDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFD

Query:  KALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVTKSLPRVVRL--------------
        K+LL+LV    ++ P  +D S C FWVQ+ +I F  +T  +A+ LG+ +G +EEV G    DW+   + VR+ ++V K L R +++              
Subjt:  KALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVTKSLPRVVRL--------------

Query:  ---------CGRIGHSHRE
                 CG +GHS RE
Subjt:  ---------CGRIGHSHRE

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]1.1e-2744.52Show/hide
Query:  MEDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFD
        M+++    +N +LT EE     V     +L   +IQLC V K+ +SK ++  A  +VM  +W +  STRIE+ G NI+VI F ++ EK R+L +G WTFD
Subjt:  MEDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFD

Query:  KALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEV
        K+L VLVSP  +D P  +DF  C FWVQ+  IPF YLT  +A+ LG  +G +EEV
Subjt:  KALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEV

XP_024953751.1 uncharacterized protein LOC112498094 [Citrus sinensis]1.2e-2931.89Show/hide
Query:  EDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFDK
        E+L+ + + + L++EE   V   +      E  +  C + KV++++ V+++  +  M  +W   R  +IESLGDNIF+ +F S  +K  IL  G W FD+
Subjt:  EDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFDK

Query:  ALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVTKSLPRVVRL---------------
        AL+VL+ P         DFS   FWVQ+  +P   +T  +  ALG  +G +EEV  +  G+  G  +R+RI +D+T+ L +++ L               
Subjt:  ALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVTKSLPRVVRL---------------

Query:  ----------CGRIGHSHRECPEVVSAAALDARFPFGDWLRASPL--RRMSSRG
                  CGRIGH +REC    S +       +G WL+AS +  R   SRG
Subjt:  ----------CGRIGHSHRECPEVVSAAALDARFPFGDWLRASPL--RRMSSRG

TrEMBL top hitse value%identityAlignment
A0A5C7GZQ4 CCHC-type domain-containing protein5.3e-2833.88Show/hide
Query:  EDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFDK
        E++ N  + L L E E + + + +G        + L    K+LS K VN +AF +V+  IW  ++   IE L  NIF   F    ++  +L+ G W+FDK
Subjt:  EDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFDK

Query:  ALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVTKSLPRVVRL---------------
        ALLVL  P        + F    FW+Q+  +P   +T  + R LGS++G ++E+   G GD +G  +RVR+V+DVTK L R++R+               
Subjt:  ALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVTKSLPRVVRL---------------

Query:  ---------CGRIGHSHRECPEVVSAA-ALDARFPFGDWLRA
                 CGRIGH  R+C  V S+    D    FG WLRA
Subjt:  ---------CGRIGHSHRECPEVVSAA-ALDARFPFGDWLRA

A0A6J1D765 uncharacterized protein LOC1110179023.2e-4136Show/hide
Query:  MEDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFD
        M+++ +  ++   T +E+  V +  G  +L   +++LC V K+ +SK ++ +A R+VM S+W V  STR E LG NI+VI F S+ EK R+L +G WTF+
Subjt:  MEDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFD

Query:  KALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVTKSLPRVVRL--------------
        K+LLVL SP  ++ P  ++F+ C FW+Q+ +IPF  ++  +A  LG+ +G +EE+ G+G   W G  +RVR+ +DV+K L R ++L              
Subjt:  KALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVTKSLPRVVRL--------------

Query:  ---------CGRIGHSHRECPEVVSAAALDARFPFGDWLRASPLRRMSS--------RGS--GDGGRRSEGIGGR
                 CG+IGHS REC +       ++   +GDWLRA+ L++  S        RG   G G + + G GGR
Subjt:  ---------CGRIGHSHRECPEVVSAAALDARFPFGDWLRASPLRRMSS--------RGS--GDGGRRSEGIGGR

A0A6J1DP89 uncharacterized protein LOC1110229328.2e-2936.02Show/hide
Query:  MEDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFD
        M+++    +N  LT+E+   + + +   L+   ++Q  AV K+ +SK ++V+AFR+VM S+W V  ST IE+ G N++VI F S+ EK R+L +G W+F+
Subjt:  MEDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFD

Query:  KALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVTKSLPRVVRL
         +LLVL SP  +D P  ++F+    W+Q+  IPF+ +   +A+ LG+ +G +EE+   G  +W G  +RVR+ +D++K   R +++
Subjt:  KALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVTKSLPRVVRL

A0A6J1DVS4 uncharacterized protein LOC1110235556.1e-3236.53Show/hide
Query:  MEDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFD
        M+D+    +N  L +EE   + +     +L   +IQLCAV K+  SK + V+AF +VM  +W +  STRIE+ G NI+VI F ++ EK+R+   G WTFD
Subjt:  MEDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFD

Query:  KALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVTKSLPRVVRL--------------
        K+LL+LV    ++ P  +D S C FWVQ+ +I F  +T  +A+ LG+ +G +EEV G    DW+   + VR+ ++V K L R +++              
Subjt:  KALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVTKSLPRVVRL--------------

Query:  ---------CGRIGHSHRE
                 CG +GHS RE
Subjt:  ---------CGRIGHSHRE

A0A6J1DYG3 uncharacterized protein LOC1110246765.3e-2844.52Show/hide
Query:  MEDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFD
        M+++    +N +LT EE     V     +L   +IQLC V K+ +SK ++  A  +VM  +W +  STRIE+ G NI+VI F ++ EK R+L +G WTFD
Subjt:  MEDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFD

Query:  KALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEV
        K+L VLVSP  +D P  +DF  C FWVQ+  IPF YLT  +A+ LG  +G +EEV
Subjt:  KALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding1.1e-0426.83Show/hide
Query:  FSSVGEKLRILKTGSWTFDKALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVT----
        F S      IL+ G W+F+  + V+   R +   +  +F    FW+Q+  IP R+LT   AR + S+            G+ MG  +   +  DV+    
Subjt:  FSSVGEKLRILKTGSWTFDKALLVLVSPRVSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVT----

Query:  --KSLPRVVRLCGRIGHSHRECP
          + L      CG + H   ECP
Subjt:  --KSLPRVVRLCGRIGHSHRECP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATCTTGTGAATCAATCACAGAATTTGGATCTAACAGAGGAGGAATCGATTGGGGTTCCGGTGCCGGCAGGTACTCTTTTGCTTAATGAGTCTTCGATTCAGTT
ATGCGCGGTAGACAAGGTTCTTTCGTCTAAGGTTGTGAATGTTGACGCGTTCCGAAACGTTATGCTGTCTATTTGGAGTGTGCTTCGATCTACTCGGATTGAATCCTTGG
GTGACAATATCTTTGTGATTCGTTTCTCTTCTGTTGGAGAAAAGCTTCGAATATTGAAAACAGGGTCTTGGACTTTTGATAAGGCGCTTCTTGTTCTAGTTTCACCGCGA
GTATCGGATAGTCCAACTCTGTTGGACTTCTCTTGTTGTGTTTTTTGGGTCCAAGTGTCTCATATTCCTTTTCGATACCTTACGCCGGTTGTTGCTCGTGCTCTGGGTAG
TGTTGTGGGCCCGATTGAGGAAGTTGCTGGGGAGGGGTATGGCGATTGGATGGGGGCAGTGATGAGGGTTCGAATTGTTCTTGATGTAACCAAGTCGCTTCCTCGTGTTG
TTCGTTTGTGCGGGCGTATTGGGCATTCCCACAGAGAGTGTCCTGAGGTGGTTTCTGCGGCTGCTTTAGATGCTCGGTTTCCTTTTGGGGATTGGCTTCGTGCGTCTCCT
TTGCGTCGTATGAGTTCTAGAGGGTCGGGGGATGGGGGTCGGCGATCTGAAGGGATTGGTGGTCGAACTTTTGGTTGGACAGGTAGAGGTAGGGGTGGGGGGCTTACGAC
TGCGAATGTGACGGGGGATGTGACTGTGACTGTGGCTGAGTATGTGCCTATGACTATGACTATGGCTAAGAATGTACCGATGACTGGGAAGCAAGAAATGATGGATCCGC
TGGTTGGTGGGAGTGATATTGTGGATCCTCGAGATAAGGGGAAACCGTTGATTGTTGAGAGAGCGGGGAAGGAGATCACTTCGGGTGTGAAGGGGAAAGGTTGGAAGCGG
TTAACCAGAGGTAATTTGAAAGATGTTACTAATGTGCGTGTTAGCTCTCCTGTCCCTAGTCAGAAGCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATCTTGTGAATCAATCACAGAATTTGGATCTAACAGAGGAGGAATCGATTGGGGTTCCGGTGCCGGCAGGTACTCTTTTGCTTAATGAGTCTTCGATTCAGTT
ATGCGCGGTAGACAAGGTTCTTTCGTCTAAGGTTGTGAATGTTGACGCGTTCCGAAACGTTATGCTGTCTATTTGGAGTGTGCTTCGATCTACTCGGATTGAATCCTTGG
GTGACAATATCTTTGTGATTCGTTTCTCTTCTGTTGGAGAAAAGCTTCGAATATTGAAAACAGGGTCTTGGACTTTTGATAAGGCGCTTCTTGTTCTAGTTTCACCGCGA
GTATCGGATAGTCCAACTCTGTTGGACTTCTCTTGTTGTGTTTTTTGGGTCCAAGTGTCTCATATTCCTTTTCGATACCTTACGCCGGTTGTTGCTCGTGCTCTGGGTAG
TGTTGTGGGCCCGATTGAGGAAGTTGCTGGGGAGGGGTATGGCGATTGGATGGGGGCAGTGATGAGGGTTCGAATTGTTCTTGATGTAACCAAGTCGCTTCCTCGTGTTG
TTCGTTTGTGCGGGCGTATTGGGCATTCCCACAGAGAGTGTCCTGAGGTGGTTTCTGCGGCTGCTTTAGATGCTCGGTTTCCTTTTGGGGATTGGCTTCGTGCGTCTCCT
TTGCGTCGTATGAGTTCTAGAGGGTCGGGGGATGGGGGTCGGCGATCTGAAGGGATTGGTGGTCGAACTTTTGGTTGGACAGGTAGAGGTAGGGGTGGGGGGCTTACGAC
TGCGAATGTGACGGGGGATGTGACTGTGACTGTGGCTGAGTATGTGCCTATGACTATGACTATGGCTAAGAATGTACCGATGACTGGGAAGCAAGAAATGATGGATCCGC
TGGTTGGTGGGAGTGATATTGTGGATCCTCGAGATAAGGGGAAACCGTTGATTGTTGAGAGAGCGGGGAAGGAGATCACTTCGGGTGTGAAGGGGAAAGGTTGGAAGCGG
TTAACCAGAGGTAATTTGAAAGATGTTACTAATGTGCGTGTTAGCTCTCCTGTCCCTAGTCAGAAGCGTTAG
Protein sequenceShow/hide protein sequence
MEDLVNQSQNLDLTEEESIGVPVPAGTLLLNESSIQLCAVDKVLSSKVVNVDAFRNVMLSIWSVLRSTRIESLGDNIFVIRFSSVGEKLRILKTGSWTFDKALLVLVSPR
VSDSPTLLDFSCCVFWVQVSHIPFRYLTPVVARALGSVVGPIEEVAGEGYGDWMGAVMRVRIVLDVTKSLPRVVRLCGRIGHSHRECPEVVSAAALDARFPFGDWLRASP
LRRMSSRGSGDGGRRSEGIGGRTFGWTGRGRGGGLTTANVTGDVTVTVAEYVPMTMTMAKNVPMTGKQEMMDPLVGGSDIVDPRDKGKPLIVERAGKEITSGVKGKGWKR
LTRGNLKDVTNVRVSSPVPSQKR