CuGenDBv2

Gene ID	Lag0026507
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	CCHC-type domain-containing protein
Genome location	chr10:38131494..38132027
RNA-Seq Expression	Lag0026507
Synteny	Lag0026507
Gene Ontology terms	GO:0010467 - gene expression (biological process) GO:0016310 - phosphorylation (biological process) GO:0034645 - cellular macromolecule biosynthetic process (biological process) GO:0044267 - cellular protein metabolic process (biological process) GO:0044271 - cellular nitrogen compound biosynthetic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0016301 - kinase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8667208.1 mitogen-activated protein kinase 9-like [Hibiscus syriacus]

1.0e-42

62.28

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Query:  MNLRSAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSY
        M   S IRL LAK +LANV R S+ KELWEKLE MYQA+S+SNRLYLKE+F+ L+MEEGTKISDHLS LN I+ EL  I V+IDDE+KALRLI SLP+SY
Subjt:  MNLRSAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSY

Query:  EHMKPILMYENETLSFPDVTSKLLSEERRVKS-EGRTSQKNSTLVANNWKKKKKDSVQKKGCWECRQ
        EHM+ +LMYE E ++F +VTSKL+SEERR+K+ E ++S+  +  V  N +KK K S +K  CW C Q
Subjt:  EHMKPILMYENETLSFPDVTSKLLSEERRVKS-EGRTSQKNSTLVANNWKKKKKDSVQKKGCWECRQ

KAF5758504.1 putative RNA-directed DNA polymerase [Helianthus annuus]

8.2e-48

65.27

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Query:  SAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSYEHMK
        SAIRL LAK +LANVH ISTAK+LWEKLE +YQ + ISNRLYLKEQF+TLRM+  TKISDHLSVLN I+ EL  I VK++DE+KALRLILSL +SYEHMK
Subjt:  SAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSYEHMK

Query:  PILMYENETLSFPDVTSKLLSEERRVKSEGRTSQKNSTLVANNWKKKKKDSVQKKGCWECRQSRFVK
        PILMY  ETL + DVT KLLSEE+R+ S G TS + + L+  N KKK    +    CW+C QS  VK
Subjt:  PILMYENETLSFPDVTSKLLSEERRVKSEGRTSQKNSTLVANNWKKKKKDSVQKKGCWECRQSRFVK

KAF5765959.1 putative RNA-directed DNA polymerase [Helianthus annuus]

3.1e-47

64.67

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Query:  SAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSYEHMK
        SAIRL LAK +LANVH ISTAK+LWEKLE +YQ + I NRLYLKEQF+TLRM+  TKISDHLSVLN I+ EL  I VK++DE+KALRLILSL +SYEHMK
Subjt:  SAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSYEHMK

Query:  PILMYENETLSFPDVTSKLLSEERRVKSEGRTSQKNSTLVANNWKKKKKDSVQKKGCWECRQSRFVK
        PILMY  ETL + DVT KLLSEE+R+ S G TS + + L+  N KKK    +    CW+C QS  VK
Subjt:  PILMYENETLSFPDVTSKLLSEERRVKSEGRTSQKNSTLVANNWKKKKKDSVQKKGCWECRQSRFVK

KAG7577502.1 F-box associated domain type 1 [Arabidopsis thaliana x Arabidopsis arenosa]

5.0e-45

63.31

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Query:  SAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSYEHMK
        SAIRL LAK ILANVH ISTAKELWEKLE +YQA+ +SNR+YLKE+F+TLRM EGT +SDHLSVLN I+ EL  I VK+DDE+ ALRLI SLP+SYEHMK
Subjt:  SAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSYEHMK

Query:  PILMYENETLSFPDVTSKLLSEERRVKSEGRTSQKNSTLVANNWKKKKKDSVQKKG--CWECRQSRFVK
        PIL++  E + FP+VTSKL SEE+R+ +       NS LVA+N   +KK++V KK   CW C QS  +K
Subjt:  PILMYENETLSFPDVTSKLLSEERRVKSEGRTSQKNSTLVANNWKKKKKDSVQKKG--CWECRQSRFVK

XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia]

5.0e-61

74.07

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Query:  MNLR--SAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPT
        M+LR  SAIR +LAK ILANVHRISTAKELWEKLEA+YQA+ ISNRLYLKEQF+TL+MEEG KISDHLS LN II EL  IEVKIDDE+KALRLILSLP 
Subjt:  MNLR--SAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPT

Query:  SYEHMKPILMYENETLSFPDVTSKLLSEERRVKSEGRTSQKNSTLVANNWKKKKKDSVQKKG-CWECRQS---------RFVKGLRVEC
        SYEHMKPILMY  +TL+F +VTSKLLSEERR+KSEGRTS ++S LV +NW KKKKDSVQKK  CW C QS         RFVKGL   C
Subjt:  SYEHMKPILMYENETLSFPDVTSKLLSEERRVKSEGRTSQKNSTLVANNWKKKKKDSVQKKG-CWECRQS---------RFVKGLRVEC

TrEMBL top hits

e value

%identity

Alignment

A0A2P5DGF9 Zinc finger, CCHC-type

1.9e-42

61.96

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Query:  LAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSYEHMKPILMYE
        LAK +LANV  ISTAK+LWEKL  +Y+A+ +SNR+YLKEQF+TL M EGT ISDHLS+LN I+ EL  I VKIDDE+KALRLI SLP+SYEHMKPIL+Y 
Subjt:  LAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSYEHMKPILMYE

Query:  NETLSFPDVTSKLLSEERRVKSEGRTSQKNSTLVANNWKKKKKDSVQKKG--CWECRQSRFVK
         ET+ F +VTS LLSEERR+   G  S + S L   N KKK  +   KK   CW C QS  VK
Subjt:  NETLSFPDVTSKLLSEERRVKSEGRTSQKNSTLVANNWKKKKKDSVQKKG--CWECRQSRFVK

A0A6A2WZ82 Mitogen-activated protein kinase 9-like

5.0e-43

62.28

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Query:  MNLRSAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSY
        M   S IRL LAK +LANV R S+ KELWEKLE MYQA+S+SNRLYLKE+F+ L+MEEGTKISDHLS LN I+ EL  I V+IDDE+KALRLI SLP+SY
Subjt:  MNLRSAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSY

Query:  EHMKPILMYENETLSFPDVTSKLLSEERRVKS-EGRTSQKNSTLVANNWKKKKKDSVQKKGCWECRQ
        EHM+ +LMYE E ++F +VTSKL+SEERR+K+ E ++S+  +  V  N +KK K S +K  CW C Q
Subjt:  EHMKPILMYENETLSFPDVTSKLLSEERRVKS-EGRTSQKNSTLVANNWKKKKKDSVQKKGCWECRQ

A0A6A3BK59 CCHC-type domain-containing protein

1.9e-42

60.47

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Query:  MNLRSAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSY
        M   S IRL LAK +LANV R S+ KELWEKLE MYQA+S+SNRLYLKE+F+ L+MEEGTKISDHLS LN I+ EL  I V+IDDE+KALRLI SLP+SY
Subjt:  MNLRSAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSY

Query:  EHMKPILMYENETLSFPDVTSKLLSEERRVKS-EGRTSQKNSTLVANNWKKKKKDSVQKKGCWECRQSRFVK
        EHM+ +LMY  E ++F +VTSKL+SEERR+K+ E ++S+  +  V  N +KK K S +K  CW C Q   +K
Subjt:  EHMKPILMYENETLSFPDVTSKLLSEERRVKS-EGRTSQKNSTLVANNWKKKKKDSVQKKGCWECRQSRFVK

A0A6A3CWI3 CCHC-type domain-containing protein

3.3e-42

60.47

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Query:  MNLRSAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSY
        M   S IRL LAK +LANV R S+ KELWEKLE MYQA+S+SNRLYLKE+F+ L+MEEGTKISDHLS LN I+ EL  I V IDDE+KALRLI SLP+SY
Subjt:  MNLRSAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSY

Query:  EHMKPILMYENETLSFPDVTSKLLSEERRVKS-EGRTSQKNSTLVANNWKKKKKDSVQKKGCWECRQSRFVK
        EHM+ +LMY  E ++F +VTSKL+SEERR+K+ E ++S+  +  V  N +KK K S +K  CW C Q   +K
Subjt:  EHMKPILMYENETLSFPDVTSKLLSEERRVKS-EGRTSQKNSTLVANNWKKKKKDSVQKKGCWECRQSRFVK

A0A6J1CG82 uncharacterized protein LOC111010521

2.4e-61

74.07

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Query:  MNLR--SAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPT
        M+LR  SAIR +LAK ILANVHRISTAKELWEKLEA+YQA+ ISNRLYLKEQF+TL+MEEG KISDHLS LN II EL  IEVKIDDE+KALRLILSLP 
Subjt:  MNLR--SAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPT

Query:  SYEHMKPILMYENETLSFPDVTSKLLSEERRVKSEGRTSQKNSTLVANNWKKKKKDSVQKKG-CWECRQS---------RFVKGLRVEC
        SYEHMKPILMY  +TL+F +VTSKLLSEERR+KSEGRTS ++S LV +NW KKKKDSVQKK  CW C QS         RFVKGL   C
Subjt:  SYEHMKPILMYENETLSFPDVTSKLLSEERRVKSEGRTSQKNSTLVANNWKKKKKDSVQKKG-CWECRQS---------RFVKGLRVEC

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

5.6e-07

27.34

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Query:  TAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSYEHM---KPILMYENETLSFPDVT
        TA+++ E L+A+Y+ +S++++L L+++  +L++     +  H  + + +I EL     KI++ +K   L+++LP+ Y+ +      L  EN TL+F  V 
Subjt:  TAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSYEHM---KPILMYENETLSFPDVT

Query:  SKLLSEERRVKSE-GRTSQKNSTLVANNWKKKKKDSVQK
        ++LL +E ++K++   TS+K    + +N     K+++ K
Subjt:  SKLLSEERRVKSE-GRTSQKNSTLVANNWKKKKKDSVQK

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

1.6e-22

35.59

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Query:  SAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSYEHMK
        SAIRL+L+  ++ N+    TA+ +W +LE++Y +++++N+LYLK+Q Y L M EGT    HL+V N +I +L  + VKI++E+KA+ L+ SLP+SY+++ 
Subjt:  SAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSYEHMK

Query:  PILMYENETLSFPDVTSK-LLSEERRVKSE-----------GRTSQKNSTLVANN---WKKKKKDSVQKKGCWECRQ
          +++   T+   DVTS  LL+E+ R K E           GR+ Q++S     +    K K +   + + C+ C Q
Subjt:  PILMYENETLSFPDVTSK-LLSEERRVKSE-----------GRTSQKNSTLVANN---WKKKKKDSVQKKGCWECRQ

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGAATTTGAGAAGTGCAATCAGACTAAATTTGGCTAAGAAAATTCTTGCAAATGTACATAGAATTTCGACAGCCAAAGAGCTTTGGGAGAAGCTTGAGGCAATGTATCA
GGCAAGGAGCATCTCGAATCGGTTGTACCTGAAGGAGCAGTTTTACACGCTGCGAATGGAGGAAGGTACAAAAATCTCAGATCATCTGAGTGTTCTCAATTGCATAATTT
TGGAGCTGGGGGTGATCGAAGTTAAGATAGATGATGAGAATAAGGCACTCAGGCTTATCTTGTCACTTCCAACTTCCTATGAACACATGAAGCCAATCTTGATGTACGAG
AATGAAACTTTAAGTTTTCCTGATGTTACTAGTAAATTGTTATCAGAGGAAAGAAGGGTGAAGAGTGAAGGGCGTACTTCACAAAAGAATTCAACTCTAGTAGCTAACAA
TTGGAAGAAGAAGAAGAAAGATTCCGTGCAGAAGAAAGGTTGTTGGGAATGCAGACAAAGCAGGTTCGTCAAAGGGCTCCGGGTCGAATGCTGA

mRNA sequence

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Protein sequence

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MNLRSAIRLNLAKKILANVHRISTAKELWEKLEAMYQARSISNRLYLKEQFYTLRMEEGTKISDHLSVLNCIILELGVIEVKIDDENKALRLILSLPTSYEHMKPILMYE
NETLSFPDVTSKLLSEERRVKSEGRTSQKNSTLVANNWKKKKKDSVQKKGCWECRQSRFVKGLRVEC

Lag0026507 (gene) of Sponge gourd (AG-4) v1 genome