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Lag0026512 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026512
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:38183627..38185282
RNA-Seq ExpressionLag0026512
SyntenyLag0026512
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2619389.1 hypothetical protein D8674_015258 [Pyrus ussuriensis x Pyrus communis]3.9e-0743.24Show/hide
Query:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGMLLF
        DD++I  RA++++C+++KKIL DY  ASGQ+VN  KS      NV  + + +L +  GI  +EE G YLG+  F
Subjt:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGMLLF

XP_013715043.1 uncharacterized protein LOC106418843 [Brassica napus]5.0e-0739.44Show/hide
Query:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGM
        DDS+  C+A+E +C+TI +IL+DYA  SGQ++N  KSS      ++ ++   + +I GI+    +G YLG+
Subjt:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGM

XP_019085420.1 PREDICTED: uncharacterized protein LOC109126369 [Camelina sativa]1.7e-0743.66Show/hide
Query:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGM
        DDS+  C+AE  +C+T+ +I+ +Y +ASGQ VN++KSS M  K V   K   L ++ GI K   +G YLG+
Subjt:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGM

XP_022546261.1 uncharacterized protein LOC106418827 [Brassica napus]3.9e-0739.44Show/hide
Query:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGM
        DDS+  C+A+E +C+TI +IL+DYA  SGQ++N  KSS      ++ ++   + +I GI+    +G YLG+
Subjt:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGM

XP_033134232.1 uncharacterized protein LOC117127708 [Brassica rapa]3.9e-0739.44Show/hide
Query:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGM
        DDS+  C+A+E +C+TI +IL+DYA  SGQ++N  KSS      ++ ++   + +I GI+    +G YLG+
Subjt:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGM

TrEMBL top hitse value%identityAlignment
A0A2K3MXE7 Ribonuclease H (Fragment)2.1e-0640.85Show/hide
Query:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGM
        DDS+  CRA +++ + IK I+ +Y EASGQ+VN++KS  M SK        +L NI  +++      YLGM
Subjt:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGM

A0A5E4E0W8 PREDICTED: reverse mRNAase9.3e-0740.54Show/hide
Query:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGMLLF
        DDSI   +AEE++C  +K++LEDY  ASGQ++N +KSS + S N       ++  I G+ +   LG YL + +F
Subjt:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGMLLF

A0A5N5GUV0 Uncharacterized protein1.9e-0743.24Show/hide
Query:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGMLLF
        DD++I  RA++++C+++KKIL DY  ASGQ+VN  KS      NV  + + +L +  GI  +EE G YLG+  F
Subjt:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGMLLF

A0A5N5HVH0 Uncharacterized protein9.3e-0740.54Show/hide
Query:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGMLLF
        DD++I  RA++Q+C+ + +IL+DY  ASGQ+VN  KS      NV  + + +LS+I G+  +++ G YLG+  F
Subjt:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGMLLF

A0A6P6X6E5 uncharacterized protein LOC1137399691.6e-0640.85Show/hide
Query:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGM
        DDS+I C+A+ +  E +++ILE Y  +SGQ++N+ KSS   SKN+DH+K  ++    G  +    G YLG+
Subjt:  DDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCACTTATAGCATCTTGACATTGCTTGCTTTTCACGTGCAGATTCTGAAGACTAAAGATGACAGTATCATTCTATGCCGCGCTGAGGAGCAAGATTGTGAGACTAT
AAAGAAAATCCTAGAGGATTATGCCGAAGCTTCTGGTCAGATTGTCAATGTTAACAAGTCATCCTTCATGACGAGTAAGAATGTTGACCACACAAAGGCGGCAAAGTTGA
GCAACATTTTTGGAATTGAAAAATCAGAGGAGCTTGGATATTACCTGGGCATGCTGTTGTTCTTACTAACCAAGAACAATCACAAGGATCCTATCGCAAGTTCACACAGT
GACAAACAAAGAGATAACAGAGATGAAAGGGAAGAAGAACACAGTGAGTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCCACTTATAGCATCTTGACATTGCTTGCTTTTCACGTGCAGATTCTGAAGACTAAAGATGACAGTATCATTCTATGCCGCGCTGAGGAGCAAGATTGTGAGACTAT
AAAGAAAATCCTAGAGGATTATGCCGAAGCTTCTGGTCAGATTGTCAATGTTAACAAGTCATCCTTCATGACGAGTAAGAATGTTGACCACACAAAGGCGGCAAAGTTGA
GCAACATTTTTGGAATTGAAAAATCAGAGGAGCTTGGATATTACCTGGGCATGCTGTTGTTCTTACTAACCAAGAACAATCACAAGGATCCTATCGCAAGTTCACACAGT
GACAAACAAAGAGATAACAGAGATGAAAGGGAAGAAGAACACAGTGAGTTATAG
Protein sequenceShow/hide protein sequence
MPTYSILTLLAFHVQILKTKDDSIILCRAEEQDCETIKKILEDYAEASGQIVNVNKSSFMTSKNVDHTKAAKLSNIFGIEKSEELGYYLGMLLFLLTKNNHKDPIASSHS
DKQRDNRDEREEEHSEL