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Lag0026517 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026517
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:38273210..38273659
RNA-Seq ExpressionLag0026517
SyntenyLag0026517
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU51865.1 hypothetical protein TSUD_416490 [Trifolium subterraneum]3.7e-0931.25Show/hide
Query:  FKVYHLVLMAYDHRPILADWKEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNVGHNTKIITEKTKECLHRLNQWSRRYYDGFIRWAISRKEKE
        F   HL+    DH PIL D+    +     +  +P+R+E++WT+ +    IV+   ++N G     +T K    L  L++W    + G I   I   +++
Subjt:  FKVYHLVLMAYDHRPILADWKEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNVGHNTKIITEKTKECLHRLNQWSRRYYDGFIRWAISRKEKE

Query:  IQYLLNQ-GEQHNGTELSIKEKELENLLEDDEIYWKQRAHKEWL
        +Q L  Q G Q    ++  KEKEL+++LE +E++WKQR+   WL
Subjt:  IQYLLNQ-GEQHNGTELSIKEKELENLLEDDEIYWKQRAHKEWL

PNY18108.1 ribonuclease H, partial [Trifolium pratense]4.8e-0933.56Show/hide
Query:  SVFKVY---HLVLMAYDHRPILADWKEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNVGHNTKIITEKTKECLHRLNQWSRRYYDGFIRWAIS
        S+F VY   HLV    DH PIL ++ +E   +        +RFE++WT  ++   IV +      G     I EK +  L+ L+ W R+ + G I   I 
Subjt:  SVFKVY---HLVLMAYDHRPILADWKEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNVGHNTKIITEKTKECLHRLNQWSRRYYDGFIRWAIS

Query:  RKEKEIQYL-LNQGEQHNGTELSIKEKELENLLEDDEIYWKQRAHKEWL
          ++ ++ L LN   Q    ++S KEKEL+ LLE +E++W QR+   WL
Subjt:  RKEKEIQYL-LNQGEQHNGTELSIKEKELENLLEDDEIYWKQRAHKEWL

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]3.8e-1438.97Show/hide
Query:  KVYHLVLMAYDHRPILADW-KEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNVGHNTKIITEKTKECLHRLNQWSRRYYDGFIRWAISRKEKE
        ++ HL  +A DHRPILA+W     +   R + RRP RFEE W  + ECKEIV +V          +   K   CL  L +W+     G +R AI RKE E
Subjt:  KVYHLVLMAYDHRPILADW-KEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNVGHNTKIITEKTKECLHRLNQWSRRYYDGFIRWAISRKEKE

Query:  IQYLLNQGEQHNGTELSIKEKELENLLEDDEIYWKQ
        IQ ++  G       L   +++LE LLE++E YW+Q
Subjt:  IQYLLNQGEQHNGTELSIKEKELENLLEDDEIYWKQ

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]2.8e-0935.45Show/hide
Query:  MSQCSVFKVYHLVLMAYDHRPILADWKEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNVGHNTKIITEKTKECLHRLNQWSRRYYDGFIRWAI
        +++C   KV HL L++ DHRPILA W  E         +R  RFEE W + D C++I+        G   +    K   CL RLN+W++   +  ++ AI
Subjt:  MSQCSVFKVYHLVLMAYDHRPILADWKEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNVGHNTKIITEKTKECLHRLNQWSRRYYDGFIRWAI

Query:  SRKEKEIQYL
        + KEKE++ L
Subjt:  SRKEKEIQYL

XP_030958820.1 uncharacterized protein LOC115980738 [Quercus lobata]3.4e-1034.01Show/hide
Query:  KVYHLVLMAYDHRPILADWKEEPSNKKRVQPRRPRR--FEEVWTKYDECKEIVEQVCQ--RNVGHNTKIITEKTKECLHRLNQWSRRYYDGFIRWAISRK
        KV HL+    DH PIL       ++ K ++ RR  R  FE +WT+ ++CKE++++V     N+G    + T   K+C   L+ WS   + G I   I  K
Subjt:  KVYHLVLMAYDHRPILADWKEEPSNKKRVQPRRPRR--FEEVWTKYDECKEIVEQVCQ--RNVGHNTKIITEKTKECLHRLNQWSRRYYDGFIRWAISRK

Query:  EKEIQYLL-NQGEQHNGTELSIKEKELENLLEDDEIYWKQRAHKEWL
        ++ I  L+    E HNG E++   +E+ NLL+++E++W+QR+  +WL
Subjt:  EKEIQYLL-NQGEQHNGTELSIKEKELENLLEDDEIYWKQRAHKEWL

TrEMBL top hitse value%identityAlignment
A0A2N9ERX7 CCHC-type domain-containing protein8.1e-1029.86Show/hide
Query:  KVYHLVLMAYDHRPILADWKEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNVGHNTKI--ITEKTKECLHRLNQWSRRYYDGFIRWAISRKEK
        KV HL  ++ DH P+L +  +    +K+   +R   F+ +W K D+CK ++ Q     +   + +  + EK K C   L  WS+  + G +   I  K K
Subjt:  KVYHLVLMAYDHRPILADWKEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNVGHNTKI--ITEKTKECLHRLNQWSRRYYDGFIRWAISRKEK

Query:  EIQYLLNQGEQHNGTELSIKEKELENLLEDDEIYWKQRAHKEWL
        ++Q L N+    N  ++   + EL +LLE +EI+W QR+   W+
Subjt:  EIQYLLNQGEQHNGTELSIKEKELENLLEDDEIYWKQRAHKEWL

A0A2N9F7A6 Uncharacterized protein2.8e-1031.47Show/hide
Query:  VYHLVLMAYDHRPILADWKEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNVGHNTKI--ITEKTKECLHRLNQWSRRYYDGFIRWAISRKEKE
        VYHL +   DH P+L D    PS    V+ ++  RFE +WTK ++C+ ++ +    ++   + +  +TEK K+C   L  WS+  + G I  +I  K ++
Subjt:  VYHLVLMAYDHRPILADWKEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNVGHNTKI--ITEKTKECLHRLNQWSRRYYDGFIRWAISRKEKE

Query:  IQYLLNQGEQHNGTELSIKEKELENLLEDDEIYWKQRAHKEWL
        +Q+  N       + L   + EL  LLE +EI+W+QR+   W+
Subjt:  IQYLLNQGEQHNGTELSIKEKELENLLEDDEIYWKQRAHKEWL

A0A2N9GPZ7 Reverse transcriptase domain-containing protein9.5e-1132.17Show/hide
Query:  VYHLVLMAYDHRPILADWKEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNV--GHNTKIITEKTKECLHRLNQWSRRYYDGFIRWAISRKEKE
        V HL +   DH PIL D  + P  K++   ++  RFE +W K ++C+E+++      V  G    ++ EK K C   L  WSR  + G +  +I RK ++
Subjt:  VYHLVLMAYDHRPILADWKEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNV--GHNTKIITEKTKECLHRLNQWSRRYYDGFIRWAISRKEKE

Query:  IQYLLNQGEQHNGTELSIKEKELENLLEDDEIYWKQRAHKEWL
        +Q+L+N+      T +   + +L  LLE +EI+W+QR+   W+
Subjt:  IQYLLNQGEQHNGTELSIKEKELENLLEDDEIYWKQRAHKEWL

A0A2N9IPS8 Reverse transcriptase domain-containing protein9.5e-1132.17Show/hide
Query:  VYHLVLMAYDHRPILADWKEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNV--GHNTKIITEKTKECLHRLNQWSRRYYDGFIRWAISRKEKE
        V HL +   DH PIL D  + P  K++   ++  RFE +W K ++C+E+++      V  G    ++ EK K C   L  WSR  + G +  +I RK ++
Subjt:  VYHLVLMAYDHRPILADWKEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNV--GHNTKIITEKTKECLHRLNQWSRRYYDGFIRWAISRKEKE

Query:  IQYLLNQGEQHNGTELSIKEKELENLLEDDEIYWKQRAHKEWL
        +Q+L+N+      T +   + +L  LLE +EI+W+QR+   W+
Subjt:  IQYLLNQGEQHNGTELSIKEKELENLLEDDEIYWKQRAHKEWL

A0A6J1DRA0 uncharacterized protein LOC1110224231.9e-1438.97Show/hide
Query:  KVYHLVLMAYDHRPILADW-KEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNVGHNTKIITEKTKECLHRLNQWSRRYYDGFIRWAISRKEKE
        ++ HL  +A DHRPILA+W     +   R + RRP RFEE W  + ECKEIV +V          +   K   CL  L +W+     G +R AI RKE E
Subjt:  KVYHLVLMAYDHRPILADW-KEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNVGHNTKIITEKTKECLHRLNQWSRRYYDGFIRWAISRKEKE

Query:  IQYLLNQGEQHNGTELSIKEKELENLLEDDEIYWKQ
        IQ ++  G       L   +++LE LLE++E YW+Q
Subjt:  IQYLLNQGEQHNGTELSIKEKELENLLEDDEIYWKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCAGTGTAGTGTTTTCAAAGTCTATCATTTGGTGCTAATGGCGTATGATCATAGACCAATATTAGCTGACTGGAAGGAAGAGCCATCGAATAAAAAGAGGGTTCA
ACCAAGACGCCCAAGAAGATTCGAAGAGGTATGGACCAAGTACGATGAGTGTAAGGAGATCGTGGAGCAGGTTTGTCAGAGGAATGTAGGACATAACACCAAAATCATTA
CAGAGAAAACAAAGGAGTGCTTGCATCGGTTAAATCAGTGGAGCAGAAGGTATTATGACGGGTTCATTAGATGGGCTATCTCAAGGAAAGAAAAAGAGATCCAATATCTT
TTGAATCAAGGGGAGCAACATAATGGTACAGAGTTGAGTATAAAAGAAAAAGAGCTTGAAAATCTCCTAGAAGATGATGAGATTTATTGGAAGCAACGAGCTCATAAAGA
GTGGCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCCAGTGTAGTGTTTTCAAAGTCTATCATTTGGTGCTAATGGCGTATGATCATAGACCAATATTAGCTGACTGGAAGGAAGAGCCATCGAATAAAAAGAGGGTTCA
ACCAAGACGCCCAAGAAGATTCGAAGAGGTATGGACCAAGTACGATGAGTGTAAGGAGATCGTGGAGCAGGTTTGTCAGAGGAATGTAGGACATAACACCAAAATCATTA
CAGAGAAAACAAAGGAGTGCTTGCATCGGTTAAATCAGTGGAGCAGAAGGTATTATGACGGGTTCATTAGATGGGCTATCTCAAGGAAAGAAAAAGAGATCCAATATCTT
TTGAATCAAGGGGAGCAACATAATGGTACAGAGTTGAGTATAAAAGAAAAAGAGCTTGAAAATCTCCTAGAAGATGATGAGATTTATTGGAAGCAACGAGCTCATAAAGA
GTGGCTATAG
Protein sequenceShow/hide protein sequence
MSQCSVFKVYHLVLMAYDHRPILADWKEEPSNKKRVQPRRPRRFEEVWTKYDECKEIVEQVCQRNVGHNTKIITEKTKECLHRLNQWSRRYYDGFIRWAISRKEKEIQYL
LNQGEQHNGTELSIKEKELENLLEDDEIYWKQRAHKEWL