; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026521 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026521
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA topoisomerase
Genome locationchr10:38356875..38375478
RNA-Seq ExpressionLag0026521
SyntenyLag0026521
Gene Ontology termsGO:0006265 - DNA topological change (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005694 - chromosome (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003917 - DNA topoisomerase type I activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR010666 - Zinc finger, GRF-type
IPR013498 - DNA topoisomerase, type IA, zn finger
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154286.1 DNA topoisomerase 3-alpha [Momordica charantia]1.9e-16289.49Show/hide
Query:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI
        +L ARLNKLKLLEAM VFFERS+GSGGDE+H     VVRRCGLCQDSDMVLKRNR+GNYMVGCLGFPQCRNVVWLPGSIAEAAVT +CCNSCTPGPVYLI
Subjt:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI

Query:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRG-TSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCS
        QFKFR LEIPPNYNANHLGCIGGCDDILRQLTEICGTGSR+S RGRG TSSSS QRGNTGQ VCI CQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCS
Subjt:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRG-TSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCS

Query:  NCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSATGEPISDRRCFVCG
        NCGTPCVLRTANTANNRGRKFY CQSQ+CNFFVWEDN+D+GN GNSAPRSNIR S S ASNPNPG+NT  GRGRGRG IA TFVSATGEPISDRRCFVCG
Subjt:  NCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSATGEPISDRRCFVCG

Query:  DPSHFANVCPNRGA
        DPSHFANVCPNRGA
Subjt:  DPSHFANVCPNRGA

XP_022934066.1 DNA topoisomerase 3-alpha isoform X1 [Cucurbita moschata]6.6e-16088.64Show/hide
Query:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI
        +L AR NK KL EAM VFFERS+GSGGDENHA   EVV+RC LCQDSDMVLKRNR+GNYMVGCLGFPQCRNVVWLPGSIAEAAVTSN CNSCTPGPVYLI
Subjt:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI

Query:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSN
        QFKFRQLEIPPNYN NHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNT QSVC+FCQQ+ HSSNDCPSQVVGSRSARRRQ+GESS SCSN
Subjt:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSN

Query:  CGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGR----GRGQIAATFVSATGEPISDRRCF
        CGTPCVLRTANT NNRGRKFYKCQSQECNFF WED+VD+ N GNSA RSNIRSSGSAASN NPGRNT RGRGR    G+GQIAATFVSA GEPISDRRCF
Subjt:  CGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGR----GRGQIAATFVSATGEPISDRRCF

Query:  VCGDPSHFANVCPNRGA
        VCGDPSHFANVCPNRGA
Subjt:  VCGDPSHFANVCPNRGA

XP_038904101.1 DNA topoisomerase 3-alpha isoform X1 [Benincasa hispida]1.6e-16189.78Show/hide
Query:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI
        +L AR+NK KLLEAM VFFERS+GSGGDEN A   EVV+RCGLCQDS+MVLKRNR+GNYMVGCL FPQCRNVVWLPGSIAEAAVTS+CCN CTPGPVYLI
Subjt:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI

Query:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSN
        QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSR+SARGRGTSSSSVQR NT QSVCIFCQQVGHSSNDCPSQVVGSRSA RRQSGE SVSCSN
Subjt:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSN

Query:  CGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSATGEPISDRRCFVCGD
        CGTPCVLRTANT NNRGRKFYKCQSQECNFFVWEDNVDN N GNSA RSNIR+SGSAA NPNPGRNT RGRGRG  +IAATFVSATGEPISDRRCFVCGD
Subjt:  CGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSATGEPISDRRCFVCGD

Query:  PSHFANVCPNRGA
         SHFANVCPNRGA
Subjt:  PSHFANVCPNRGA

XP_038904102.1 DNA topoisomerase 3-alpha isoform X2 [Benincasa hispida]1.6e-16189.78Show/hide
Query:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI
        +L AR+NK KLLEAM VFFERS+GSGGDEN A   EVV+RCGLCQDS+MVLKRNR+GNYMVGCL FPQCRNVVWLPGSIAEAAVTS+CCN CTPGPVYLI
Subjt:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI

Query:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSN
        QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSR+SARGRGTSSSSVQR NT QSVCIFCQQVGHSSNDCPSQVVGSRSA RRQSGE SVSCSN
Subjt:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSN

Query:  CGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSATGEPISDRRCFVCGD
        CGTPCVLRTANT NNRGRKFYKCQSQECNFFVWEDNVDN N GNSA RSNIR+SGSAA NPNPGRNT RGRGRG  +IAATFVSATGEPISDRRCFVCGD
Subjt:  CGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSATGEPISDRRCFVCGD

Query:  PSHFANVCPNRGA
         SHFANVCPNRGA
Subjt:  PSHFANVCPNRGA

XP_038904103.1 DNA topoisomerase 3-alpha isoform X3 [Benincasa hispida]1.6e-16189.78Show/hide
Query:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI
        +L AR+NK KLLEAM VFFERS+GSGGDEN A   EVV+RCGLCQDS+MVLKRNR+GNYMVGCL FPQCRNVVWLPGSIAEAAVTS+CCN CTPGPVYLI
Subjt:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI

Query:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSN
        QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSR+SARGRGTSSSSVQR NT QSVCIFCQQVGHSSNDCPSQVVGSRSA RRQSGE SVSCSN
Subjt:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSN

Query:  CGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSATGEPISDRRCFVCGD
        CGTPCVLRTANT NNRGRKFYKCQSQECNFFVWEDNVDN N GNSA RSNIR+SGSAA NPNPGRNT RGRGRG  +IAATFVSATGEPISDRRCFVCGD
Subjt:  CGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSATGEPISDRRCFVCGD

Query:  PSHFANVCPNRGA
         SHFANVCPNRGA
Subjt:  PSHFANVCPNRGA

TrEMBL top hitse value%identityAlignment
A0A6J1DNA0 DNA topoisomerase9.0e-16389.49Show/hide
Query:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI
        +L ARLNKLKLLEAM VFFERS+GSGGDE+H     VVRRCGLCQDSDMVLKRNR+GNYMVGCLGFPQCRNVVWLPGSIAEAAVT +CCNSCTPGPVYLI
Subjt:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI

Query:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRG-TSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCS
        QFKFR LEIPPNYNANHLGCIGGCDDILRQLTEICGTGSR+S RGRG TSSSS QRGNTGQ VCI CQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCS
Subjt:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRG-TSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCS

Query:  NCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSATGEPISDRRCFVCG
        NCGTPCVLRTANTANNRGRKFY CQSQ+CNFFVWEDN+D+GN GNSAPRSNIR S S ASNPNPG+NT  GRGRGRG IA TFVSATGEPISDRRCFVCG
Subjt:  NCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSATGEPISDRRCFVCG

Query:  DPSHFANVCPNRGA
        DPSHFANVCPNRGA
Subjt:  DPSHFANVCPNRGA

A0A6J1F0T9 DNA topoisomerase3.2e-16088.64Show/hide
Query:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI
        +L AR NK KL EAM VFFERS+GSGGDENHA   EVV+RC LCQDSDMVLKRNR+GNYMVGCLGFPQCRNVVWLPGSIAEAAVTSN CNSCTPGPVYLI
Subjt:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI

Query:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSN
        QFKFRQLEIPPNYN NHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNT QSVC+FCQQ+ HSSNDCPSQVVGSRSARRRQ+GESS SCSN
Subjt:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSN

Query:  CGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGR----GRGQIAATFVSATGEPISDRRCF
        CGTPCVLRTANT NNRGRKFYKCQSQECNFF WED+VD+ N GNSA RSNIRSSGSAASN NPGRNT RGRGR    G+GQIAATFVSA GEPISDRRCF
Subjt:  CGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGR----GRGQIAATFVSATGEPISDRRCF

Query:  VCGDPSHFANVCPNRGA
        VCGDPSHFANVCPNRGA
Subjt:  VCGDPSHFANVCPNRGA

A0A6J1F1M3 DNA topoisomerase3.2e-16088.64Show/hide
Query:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI
        +L AR NK KL EAM VFFERS+GSGGDENHA   EVV+RC LCQDSDMVLKRNR+GNYMVGCLGFPQCRNVVWLPGSIAEAAVTSN CNSCTPGPVYLI
Subjt:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI

Query:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSN
        QFKFRQLEIPPNYN NHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNT QSVC+FCQQ+ HSSNDCPSQVVGSRSARRRQ+GESS SCSN
Subjt:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSN

Query:  CGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGR----GRGQIAATFVSATGEPISDRRCF
        CGTPCVLRTANT NNRGRKFYKCQSQECNFF WED+VD+ N GNSA RSNIRSSGSAASN NPGRNT RGRGR    G+GQIAATFVSA GEPISDRRCF
Subjt:  CGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGR----GRGQIAATFVSATGEPISDRRCF

Query:  VCGDPSHFANVCPNRGA
        VCGDPSHFANVCPNRGA
Subjt:  VCGDPSHFANVCPNRGA

A0A6J1IXM8 DNA topoisomerase1.0e-15887.7Show/hide
Query:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI
        +L AR NK KL EAM VFFERS+GSGGDENHA   EVV+RC LCQDSDMVLKRNR+GNYMVGCLGFPQCRNVVWLPGSIAEAAVTSN CNSCTPGPVYLI
Subjt:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI

Query:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSN
        QFKFRQLEIPPNYN NHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNT QSVC+FCQQ+ HSSNDCPSQVVGSRSAR RQ+GESS SCSN
Subjt:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSN

Query:  CGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGR----GRGRGQIAATFVSATGEPISDRRCF
        CGTPCVLRTANT NNRGRKFYKCQSQECNFF WED+VD+ N GNSA +SNIRSS SAASN NPGRNT RGR    G+G+GQIAATFVSATGEPISDRRCF
Subjt:  CGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGR----GRGRGQIAATFVSATGEPISDRRCF

Query:  VCGDPSHFANVCPNRGA
        VCGDPSHFANVCPNRGA
Subjt:  VCGDPSHFANVCPNRGA

A0A6J1J603 DNA topoisomerase1.0e-15887.7Show/hide
Query:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI
        +L AR NK KL EAM VFFERS+GSGGDENHA   EVV+RC LCQDSDMVLKRNR+GNYMVGCLGFPQCRNVVWLPGSIAEAAVTSN CNSCTPGPVYLI
Subjt:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI

Query:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSN
        QFKFRQLEIPPNYN NHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNT QSVC+FCQQ+ HSSNDCPSQVVGSRSAR RQ+GESS SCSN
Subjt:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSN

Query:  CGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGR----GRGRGQIAATFVSATGEPISDRRCF
        CGTPCVLRTANT NNRGRKFYKCQSQECNFF WED+VD+ N GNSA +SNIRSS SAASN NPGRNT RGR    G+G+GQIAATFVSATGEPISDRRCF
Subjt:  CGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGR----GRGRGQIAATFVSATGEPISDRRCF

Query:  VCGDPSHFANVCPNRGA
        VCGDPSHFANVCPNRGA
Subjt:  VCGDPSHFANVCPNRGA

SwissProt top hitse value%identityAlignment
C7J0A2 DNA topoisomerase 3-alpha6.6e-7848.47Show/hide
Query:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI
        +L AR NK+KL +AMG FF RS     +  ++   E VR C  C +S+M LK+   G +MVGC GFPQCRNVVWLP S++ AAVT   C +C PGPVY I
Subjt:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI

Query:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSR----ISARGRGTSSSSVQRGNTGQSV-CIFCQQVGHSSNDCP-SQVVGSRSARRRQSGES
        QFKFR+ +IPPN++ +HLGCIGGCDDIL++L E+   GS       AR +  ++S V++G++ Q +   F   V  ++   P     G RS   + SG +
Subjt:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSR----ISARGRGTSSSSVQRGNTGQSV-CIFCQQVGHSSNDCP-SQVVGSRSARRRQSGES

Query:  S--VSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDN------GNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSAT
        S  V C++C  PCVLRTANT  NRGRKFYKCQ+  C FF WED+V+N      G  G     S+ +SS SA++    G      RGRGR      FV+AT
Subjt:  S--VSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDN------GNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSAT

Query:  GEPISDRRCFVCGDPSHFANVCPNRG
        GEP+    CF+CGDP+HFANVCPN G
Subjt:  GEPISDRRCFVCGDPSHFANVCPNRG

O70157 DNA topoisomerase 3-alpha1.2e-3132.12Show/hide
Query:  YLQARLNKLKLLEAMGVFF-ERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYL
        +++A     KL EA+  +  ER+  +  +E + A  E VR+C  C + DMVLK  + G + + C+GFP+CR+ VW P S+ EA+  ++ C+ C P PVY 
Subjt:  YLQARLNKLKLLEAMGVFF-ERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYL

Query:  IQFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCS
        ++ KF++  +PP      +GCIGGCD+ L+++  +    +   A        + Q  N   S      Q   + +  PS+ V         +GES+    
Subjt:  IQFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCS

Query:  NCGTPCVLRTANTAN-NRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRG
        NCG   VL T      N+GR FYKC + +CNFF+W D+  + + G   P S     GS+   P+   + + G G
Subjt:  NCGTPCVLRTANTAN-NRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRG

Q13472 DNA topoisomerase 3-alpha2.9e-3331.23Show/hide
Query:  YLQARLNKLKLLEAMGVFFERSHGSGGDEN-HAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYL
        +++A     KL EA+  +F         E+ + A  E +R+C  C + DMVLK  + G + + C+GFP+CR+ VWLP S+ EA+  S+ C  C P PVY 
Subjt:  YLQARLNKLKLLEAMGVFFERSHGSGGDEN-HAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYL

Query:  IQFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISA---RGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSV
        ++ KF++  +PP      + CIGGCDD LR++ ++  +G    A    GR  ++ S+ R +  Q       Q   S     S+ +         +GES+ 
Subjt:  IQFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISA---RGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSV

Query:  SCSNCGTPCVLRTANTAN-NRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNP-----------NPGRNTVRGRGRGRGQIAATFVS
           NCG   VL T      NRGR+F+KC    CNFF+W D+ + G  G   P    R  G++   P           NPG  +  G      Q + T   
Subjt:  SCSNCGTPCVLRTANTAN-NRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNP-----------NPGRNTVRGRGRGRGQIAATFVS

Query:  ATGEPISDRRCFVCGDP
            P   R+   C  P
Subjt:  ATGEPISDRRCFVCGDP

Q9LVP1 DNA topoisomerase 3-alpha3.4e-9856.88Show/hide
Query:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI
        +L AR+ K KLLEAM +FFERS+ +   E+  A  EVVRRC LC +SDM L++NR+GN+MVGC+ +PQCRN VWLPG   EA+VT+N C SC PGPVY I
Subjt:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI

Query:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGR-GTS-SSSVQRGNTGQS-VCIFCQQVGHSSNDCPSQVVGSRSAR----RRQSGE
         FKFRQ+ IPP ++ NHLGC+GGCDDIL+QL +ICGTGSR  AR   GT+ S+++Q  NT QS VCI CQQ GH+S +CPS+V  SR++R      ++ E
Subjt:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGR-GTS-SSSVQRGNTGQS-VCIFCQQVGHSSNDCPSQVVGSRSAR----RRQSGE

Query:  SSVSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGR---------GRGQIAATFVS
        S+VSC+ CG+ CVLRTANT  NRGR+F+ C +Q C+FF WED+++N ++GN+   SN  S GS       GR   RGRGR         GR     +FVS
Subjt:  SSVSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGR---------GRGQIAATFVS

Query:  ATGEPISDRRCFVCGDPSHFANVCPNR
        ATGEP+S  RCF CGDPSHFAN CPNR
Subjt:  ATGEPISDRRCFVCGDPSHFANVCPNR

Q9NG98 DNA topoisomerase 3-alpha6.1e-0733.78Show/hide
Query:  GSGGDENHAAAREVVRRCGLCQDSDMVL--KRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPG
        G+ G        + + +C  C ++ + L  K+N++G Y +GC  FP C+N VWLP    +A+V   CC +C  G
Subjt:  GSGGDENHAAAREVVRRCGLCQDSDMVL--KRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPG

Arabidopsis top hitse value%identityAlignment
AT3G42860.1 zinc knuckle (CCHC-type) family protein2.9e-0440.3Show/hide
Query:  CGTP-CVLRTANTANNRGRKFYKCQSQE----CNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPN
        CG   C++ T+NT  N GRKFYKC ++E    C FF W D V   ++G S   SN   +G+    P+
Subjt:  CGTP-CVLRTANTANNRGRKFYKCQSQE----CNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPN

AT5G13920.1 GRF zinc finger / Zinc knuckle protein2.1e-0739.47Show/hide
Query:  CIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSNCGTPCVLRTANTANNRGRKFYKC-QSQECNFFVWEDNV
        C  C+Q GH  NDCP +               ++ C   G  C ++ ANT  N GRKFYKC  +Q C FF W D V
Subjt:  CIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSNCGTPCVLRTANTANNRGRKFYKC-QSQECNFFVWEDNV

AT5G63920.1 topoisomerase 3alpha2.4e-9956.88Show/hide
Query:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI
        +L AR+ K KLLEAM +FFERS+ +   E+  A  EVVRRC LC +SDM L++NR+GN+MVGC+ +PQCRN VWLPG   EA+VT+N C SC PGPVY I
Subjt:  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLI

Query:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGR-GTS-SSSVQRGNTGQS-VCIFCQQVGHSSNDCPSQVVGSRSAR----RRQSGE
         FKFRQ+ IPP ++ NHLGC+GGCDDIL+QL +ICGTGSR  AR   GT+ S+++Q  NT QS VCI CQQ GH+S +CPS+V  SR++R      ++ E
Subjt:  QFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGR-GTS-SSSVQRGNTGQS-VCIFCQQVGHSSNDCPSQVVGSRSAR----RRQSGE

Query:  SSVSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGR---------GRGQIAATFVS
        S+VSC+ CG+ CVLRTANT  NRGR+F+ C +Q C+FF WED+++N ++GN+   SN  S GS       GR   RGRGR         GR     +FVS
Subjt:  SSVSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGR---------GRGQIAATFVS

Query:  ATGEPISDRRCFVCGDPSHFANVCPNR
        ATGEP+S  RCF CGDPSHFAN CPNR
Subjt:  ATGEPISDRRCFVCGDPSHFANVCPNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTGCCTTCTTTTTTCCCTTCCCTCCATAAAAGCTTGGAAATATTTGCAGGCAAGGTTGAATAAGCTAAAACTTCTTGAAGCCATGGGGGTTTTCTTTGAGAGATC
TCATGGTTCTGGTGGGGATGAAAATCATGCAGCAGCTAGAGAGGTTGTTCGACGATGTGGACTGTGTCAGGACTCAGATATGGTGCTTAAAAGAAACAGGGAGGGAAATT
ACATGGTTGGATGTTTGGGCTTTCCTCAGTGTAGAAATGTCGTCTGGCTCCCTGGATCCATTGCAGAAGCTGCAGTAACCTCTAATTGTTGCAACTCATGCACTCCAGGT
CCTGTTTACTTGATCCAGTTTAAGTTTCGTCAGCTGGAAATACCACCAAACTACAATGCTAACCACTTAGGATGTATAGGTGGTTGCGATGATATTCTTAGGCAATTGAC
AGAAATCTGTGGTACTGGATCCCGCATATCAGCTAGAGGTCGAGGGACTTCATCATCCAGTGTGCAGCGAGGTAACACTGGGCAAAGTGTATGCATTTTCTGCCAACAAG
TAGGCCATTCCTCAAATGATTGCCCATCCCAGGTTGTAGGTTCTAGAAGTGCTCGTCGTCGGCAAAGTGGTGAATCTTCAGTTTCGTGTAGTAACTGTGGCACACCGTGT
GTCTTACGGACTGCAAATACTGCCAATAATAGGGGAAGAAAGTTCTACAAATGTCAATCTCAGGAGTGCAATTTCTTCGTATGGGAAGATAACGTAGACAATGGCAATGC
AGGAAATAGTGCTCCACGGTCAAATATCAGGAGCTCAGGCTCAGCAGCTTCTAATCCTAACCCTGGTCGAAACACTGTTCGTGGTCGTGGCCGTGGCCGTGGTCAGATTG
CAGCAACATTCGTGTCAGCAACTGGTGAGCCAATATCTGATAGAAGATGTTTTGTTTGTGGCGATCCATCACACTTCGCAAATGTTTGCCCAAACCGTGGTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGTGCCTTCTTTTTTCCCTTCCCTCCATAAAAGCTTGGAAATATTTGCAGGCAAGGTTGAATAAGCTAAAACTTCTTGAAGCCATGGGGGTTTTCTTTGAGAGATC
TCATGGTTCTGGTGGGGATGAAAATCATGCAGCAGCTAGAGAGGTTGTTCGACGATGTGGACTGTGTCAGGACTCAGATATGGTGCTTAAAAGAAACAGGGAGGGAAATT
ACATGGTTGGATGTTTGGGCTTTCCTCAGTGTAGAAATGTCGTCTGGCTCCCTGGATCCATTGCAGAAGCTGCAGTAACCTCTAATTGTTGCAACTCATGCACTCCAGGT
CCTGTTTACTTGATCCAGTTTAAGTTTCGTCAGCTGGAAATACCACCAAACTACAATGCTAACCACTTAGGATGTATAGGTGGTTGCGATGATATTCTTAGGCAATTGAC
AGAAATCTGTGGTACTGGATCCCGCATATCAGCTAGAGGTCGAGGGACTTCATCATCCAGTGTGCAGCGAGGTAACACTGGGCAAAGTGTATGCATTTTCTGCCAACAAG
TAGGCCATTCCTCAAATGATTGCCCATCCCAGGTTGTAGGTTCTAGAAGTGCTCGTCGTCGGCAAAGTGGTGAATCTTCAGTTTCGTGTAGTAACTGTGGCACACCGTGT
GTCTTACGGACTGCAAATACTGCCAATAATAGGGGAAGAAAGTTCTACAAATGTCAATCTCAGGAGTGCAATTTCTTCGTATGGGAAGATAACGTAGACAATGGCAATGC
AGGAAATAGTGCTCCACGGTCAAATATCAGGAGCTCAGGCTCAGCAGCTTCTAATCCTAACCCTGGTCGAAACACTGTTCGTGGTCGTGGCCGTGGCCGTGGTCAGATTG
CAGCAACATTCGTGTCAGCAACTGGTGAGCCAATATCTGATAGAAGATGTTTTGTTTGTGGCGATCCATCACACTTCGCAAATGTTTGCCCAAACCGTGGTGCTTGA
Protein sequenceShow/hide protein sequence
MLCLLFSLPSIKAWKYLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPG
PVYLIQFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSNCGTPC
VLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSATGEPISDRRCFVCGDPSHFANVCPNRGA