| GenBank top hits | e value | %identity | Alignment |
|---|
| RVW35064.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.9e-204 | 60.5 | Show/hide |
Query: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
VY RR++ H Q NS+ +ENI + P IDD TLPIA RKGVR CT+HPI YV Y L P Y+AF + LD +P TI +A
Subjt: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
Query: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
LK +WKK V +EI ALE NGTWT+T LP GK PVGCKWIFT+KYK+DGSVERF+ARLVA+GFTQSYGIDYQETFAPVAKLNT+R+LLSLAVNQDW L Q
Subjt: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
Query: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
LD+KNAFLNGDLEEEVYM+IPPG E+ N VCKL+KSLYGLKQSPRAWFDRF K ++K GY Q QADHTLFVK S+ K AILIVYVDDII++GND+
Subjt: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
Query: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
E+ NLK+ L+ EFE+KDLG+L+YFLGMEVARS GI++SQR YILDLL RPDI
Subjt: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
Query: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
++VS SQ+M++P E H+ AV RIL+YLK TPG GL F+K+ +R E+Y+DA WAG + DR+ T+GYCS+VWGNLVTWRSKKQ+VVARSSAEAEYRALA
Subjt: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
Query: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
GICEGIWI+++L+EL + + + M CD+Q+AISIAKNP+HHDRTKH+EIDRHFI EKV + V+LNYVP+++Q ADILTKALPR +FE+ KLGL
Subjt: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
Query: LLEKA
+ A
Subjt: LLEKA
|
|
| RVW70260.1 Copia protein [Vitis vinifera] | 1.1e-204 | 60.5 | Show/hide |
Query: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
VY RR++ H Q NS+ +ENI + P IDD TLPIA RKGVR CT+HPI YV Y L P Y+AF + LD +P TI +A
Subjt: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
Query: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
LK +WKK V +EI ALE NGTWT+T LP GK PVGCKWIFT+KYK+DGSVERF+ARLVA+GFTQSYGIDYQETFAPVAKLNT+R+LLSLAVNQDW L Q
Subjt: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
Query: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
LD+KNAFLNGDLEEEVYM+IPPG E+ N VCKL+KSLYGLKQSPRAWFDRF K ++K GY Q QADHTLFVK S+ K AILIVYVDDII++GND+
Subjt: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
Query: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
E+ NLK+ L+ EFE+KDLG+L+YFLGMEVARS GI++SQR YILDLL RPDI
Subjt: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
Query: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
++VS SQ+M++P E H+ AV RIL+YLK TPG GL F+K+ +R E+Y+DA WAG + DR+ T+GYCS+VWGNLVTWRSKKQ+VVARSSAEAEYRALA
Subjt: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
Query: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
GICEGIWI+++L+EL + + + M CD+Q+AISIAKNP+HHDRTKH+EIDRHFI EKV + V+LNYVP+++Q ADILTKALPR +FE+ KLGL
Subjt: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
Query: LLEKA
+ A
Subjt: LLEKA
|
|
| RVW86492.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.9e-204 | 60.5 | Show/hide |
Query: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
VY RR++ H Q NS+ +ENI + P IDD TLPIA RKGVR CT+HPI YV Y L P Y+AF + LD +P TI +A
Subjt: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
Query: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
LK +WKK V +EI ALE NGTWT+T LP GK PVGCKWIFT+KYK+DGSVERF+ARLVA+GFTQSYGIDYQETFAPVAKLNT+R+LLSLAVNQDW L Q
Subjt: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
Query: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
LD+KNAFLNGDLEEEVYM+IPPG E+ N VCKL+KSLYGLKQSPRAWFDRF K ++K GY Q QADHTLFVK S+ K AILIVYVDDII++GND+
Subjt: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
Query: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
E+ NLK+ L+ EFE+KDLG+L+YFLGMEVARS GI++SQR YILDLL RPDI
Subjt: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
Query: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
++VS SQ+M++P E H+ AV RIL+YLK TPG GL F+K+ +R E+Y+DA WAG + DR+ T+GYCS+VWGNLVTWRSKKQ+VVARSSAEAEYRALA
Subjt: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
Query: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
GICEGIWI+++L+EL + + + M CD+Q+AISIAKNP+HHDRTKH+EIDRHFI EKV + V+LNYVP+++Q ADILTKALPR +FE+ KLGL
Subjt: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
Query: LLEKA
+ A
Subjt: LLEKA
|
|
| RVX02146.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 8.7e-205 | 60.5 | Show/hide |
Query: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
VY RR++ H Q NS+ +ENI + P IDD TLPIA RKGVR CT+HPI YV Y L P Y+AF + LD +P TI +A
Subjt: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
Query: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
LK +WKK V +EI ALE NGTWT+T LP GK PVGCKWIFT+KYK+DGSVERF+ARLVA+GFTQSYGIDYQETFAPVAKLNT+R+LLSLAVNQDW L Q
Subjt: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
Query: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
LD+KNAFLNGDLEEEVYM+IPPG E+ N VCKL+KSLYGLKQSPRAWFDRF K ++K GY Q QADHTLFVK S+ K AILIVYVDDII++GND+
Subjt: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
Query: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
E+ NLK+ L+ EFE+KDLG+L+YFLGMEVARS GI++SQR YILDLL RPDI
Subjt: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
Query: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
++VS SQ+M++P E H+ AV RIL+YLK TPG GL F+K+ +R E+Y+DA WAG + DR+ T+GYCS+VWGNLVTWRSKKQ+VVARSSAEAEYRALA
Subjt: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
Query: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
GICEGIWI+++L+EL + + + M CD+Q+AISIAKNP+HHDRTKH+EIDRHFI EKV + V+LNYVP+++Q ADILTKALPR +FE+ KLGL
Subjt: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
Query: LLEKA
+ A
Subjt: LLEKA
|
|
| RVX19036.1 Copia protein [Vitis vinifera] | 1.9e-204 | 60.5 | Show/hide |
Query: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
VY RR++ H Q NS+ +ENI + P IDD TLPIA RKGVR CT+HPI YV Y L P Y+AF + LD +P TI +A
Subjt: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
Query: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
LK +WKK V +EI ALE NGTWT+T LP GK PVGCKWIFT+KYK+DGSVERF+ARLVA+GFTQSYGIDYQETFAPVAKLNT+R+LLSLAVNQDW L Q
Subjt: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
Query: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
LD+KNAFLNGDLEEEVYM+IPPG E+ N VCKL+KSLYGLKQSPRAWFDRF K ++K GY Q QADHTLFVK S+ K AILIVYVDDII++GND+
Subjt: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
Query: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
E+ NLK+ L+ EFE+KDLG+L+YFLGMEVARS GI++SQR YILDLL RPDI
Subjt: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
Query: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
++VS SQ+M++P E H+ AV RIL+YLK TPG GL F+K+ +R E+Y+DA WAG + DR+ T+GYCS+VWGNLVTWRSKKQ+VVARSSAEAEYRALA
Subjt: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
Query: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
GICEGIWI+++L+EL + + + M CD+Q+AISIAKNP+HHDRTKH+EIDRHFI EKV + V+LNYVP+++Q ADILTKALPR +FE+ KLGL
Subjt: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
Query: LLEKA
+ A
Subjt: LLEKA
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438DHV4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.4e-205 | 60.5 | Show/hide |
Query: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
VY RR++ H Q NS+ +ENI + P IDD TLPIA RKGVR CT+HPI YV Y L P Y+AF + LD +P TI +A
Subjt: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
Query: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
LK +WKK V +EI ALE NGTWT+T LP GK PVGCKWIFT+KYK+DGSVERF+ARLVA+GFTQSYGIDYQETFAPVAKLNT+R+LLSLAVNQDW L Q
Subjt: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
Query: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
LD+KNAFLNGDLEEEVYM+IPPG E+ N VCKL+KSLYGLKQSPRAWFDRF K ++K GY Q QADHTLFVK S+ K AILIVYVDDII++GND+
Subjt: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
Query: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
E+ NLK+ L+ EFE+KDLG+L+YFLGMEVARS GI++SQR YILDLL RPDI
Subjt: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
Query: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
++VS SQ+M++P E H+ AV RIL+YLK TPG GL F+K+ +R E+Y+DA WAG + DR+ T+GYCS+VWGNLVTWRSKKQ+VVARSSAEAEYRALA
Subjt: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
Query: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
GICEGIWI+++L+EL + + + M CD+Q+AISIAKNP+HHDRTKH+EIDRHFI EKV + V+LNYVP+++Q ADILTKALPR +FE+ KLGL
Subjt: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
Query: LLEKA
+ A
Subjt: LLEKA
|
|
| A0A438GDK0 Copia protein | 5.5e-205 | 60.5 | Show/hide |
Query: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
VY RR++ H Q NS+ +ENI + P IDD TLPIA RKGVR CT+HPI YV Y L P Y+AF + LD +P TI +A
Subjt: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
Query: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
LK +WKK V +EI ALE NGTWT+T LP GK PVGCKWIFT+KYK+DGSVERF+ARLVA+GFTQSYGIDYQETFAPVAKLNT+R+LLSLAVNQDW L Q
Subjt: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
Query: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
LD+KNAFLNGDLEEEVYM+IPPG E+ N VCKL+KSLYGLKQSPRAWFDRF K ++K GY Q QADHTLFVK S+ K AILIVYVDDII++GND+
Subjt: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
Query: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
E+ NLK+ L+ EFE+KDLG+L+YFLGMEVARS GI++SQR YILDLL RPDI
Subjt: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
Query: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
++VS SQ+M++P E H+ AV RIL+YLK TPG GL F+K+ +R E+Y+DA WAG + DR+ T+GYCS+VWGNLVTWRSKKQ+VVARSSAEAEYRALA
Subjt: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
Query: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
GICEGIWI+++L+EL + + + M CD+Q+AISIAKNP+HHDRTKH+EIDRHFI EKV + V+LNYVP+++Q ADILTKALPR +FE+ KLGL
Subjt: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
Query: LLEKA
+ A
Subjt: LLEKA
|
|
| A0A438IZK5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.2e-205 | 60.5 | Show/hide |
Query: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
VY RR++ H Q NS+ +ENI + P IDD TLPIA RKGVR CT+HPI YV Y L P Y+AF + LD +P TI +A
Subjt: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
Query: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
LK +WKK V +EI ALE NGTWT+T LP GK PVGCKWIFT+KYK+DGSVERF+ARLVA+GFTQSYGIDYQETFAPVAKLNT+R+LLSLAVNQDW L Q
Subjt: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
Query: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
LD+KNAFLNGDLEEEVYM+IPPG E+ N VCKL+KSLYGLKQSPRAWFDRF K ++K GY Q QADHTLFVK S+ K AILIVYVDDII++GND+
Subjt: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
Query: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
E+ NLK+ L+ EFE+KDLG+L+YFLGMEVARS GI++SQR YILDLL RPDI
Subjt: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
Query: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
++VS SQ+M++P E H+ AV RIL+YLK TPG GL F+K+ +R E+Y+DA WAG + DR+ T+GYCS+VWGNLVTWRSKKQ+VVARSSAEAEYRALA
Subjt: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
Query: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
GICEGIWI+++L+EL + + + M CD+Q+AISIAKNP+HHDRTKH+EIDRHFI EKV + V+LNYVP+++Q ADILTKALPR +FE+ KLGL
Subjt: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
Query: LLEKA
+ A
Subjt: LLEKA
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| A0A438KCU4 Copia protein | 9.4e-205 | 60.5 | Show/hide |
Query: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
VY RR++ H Q NS+ +ENI + P IDD TLPIA RKGVR CT+HPI YV Y L P Y+AF + LD +P TI +A
Subjt: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
Query: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
LK +WKK V +EI ALE NGTWT+T LP GK PVGCKWIFT+KYK+DGSVERF+ARLVA+GFTQSYGIDYQETFAPVAKLNT+R+LLSLAVNQDW L Q
Subjt: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
Query: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
LD+KNAFLNGDLEEEVYM+IPPG E+ N VCKL+KSLYGLKQSPRAWFDRF K ++K GY Q QADHTLFVK S+ K AILIVYVDDII++GND+
Subjt: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
Query: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
E+ NLK+ L+ EFE+KDLG+L+YFLGMEVARS GI++SQR YILDLL RPDI
Subjt: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
Query: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
++VS SQ+M++P E H+ AV RIL+YLK TPG GL F+K+ +R E+Y+DA WAG + DR+ T+GYCS+VWGNLVTWRSKKQ+VVARSSAEAEYRALA
Subjt: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
Query: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
GICEGIWI+++L+EL + + + M CD+Q+AISIAKNP+HHDRTKH+EIDRHFI EKV + V+LNYVP+++Q ADILTKALPR +FE+ KLGL
Subjt: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
Query: LLEKA
+ A
Subjt: LLEKA
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| A0A438KPB7 Copia protein | 9.4e-205 | 60.5 | Show/hide |
Query: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
VY RR++ H Q NS+ +ENI + P IDD TLPIA RKGVR CT+HPI YV Y L P Y+AF + LD +P TI +A
Subjt: VYTRRKEVTLQNHECQPPEPDSSSLNST--DENITS------MAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDA
Query: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
LK +WKK V +EI ALE NGTWT+T LP GK PVGCKWIFT+KYK+DGSVERF+ARLVA+GFTQSYGIDYQETFAPVAKLNT+R+LLSLAVNQDW L Q
Subjt: LKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQ
Query: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
LD+KNAFLNGDLEEEVYM+IPPG E+ N VCKL+KSLYGLKQSPRAWFDRF K ++K GY Q QADHTLFVK S+ K AILIVYVDDII++GND+
Subjt: LDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSN-NKTAILIVYVDDIIITGNDVD
Query: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
E+ NLK+ L+ EFE+KDLG+L+YFLGMEVARS GI++SQR YILDLL RPDI
Subjt: EILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDI
Query: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
++VS SQ+M++P E H+ AV RIL+YLK TPG GL F+K+ +R E+Y+DA WAG + DR+ T+GYCS+VWGNLVTWRSKKQ+VVARSSAEAEYRALA
Subjt: AYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALA
Query: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
GICEGIWI+++L+EL + + + M CD+Q+AISIAKNP+HHDRTKH+EIDRHFI EKV + V+LNYVP+++Q ADILTKALPR +FE+ KLGL
Subjt: LGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLIS
Query: LLEKA
+ A
Subjt: LLEKA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| C7J0A2 DNA topoisomerase 3-alpha | 4.4e-66 | 79.19 | Show/hide |
Query: VDIKRNYLDVYRFESWGGSTIPTYVSGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDANTRFTPTNLGEALVM
V + +NYLDVYRF+SWGG+ +PTY+ GQQFVPTTLTLDSG+TRPPPLL+EADLL CMDK GIGTDATMHDHIKKLLDR YATKDANTRF+PTNLGEALVM
Subjt: VDIKRNYLDVYRFESWGGSTIPTYVSGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDANTRFTPTNLGEALVM
Query: GYDDMGYKLWKPHLRAVMEHEMKSVSEGTKRKDEFLATSLQQMKTCFLD
GYD+MGY+LWKP+LR++ME +MKSVS GTK K E L LQQMK CFLD
Subjt: GYDDMGYKLWKPHLRAVMEHEMKSVSEGTKRKDEFLATSLQQMKTCFLD
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| P04146 Copia protein | 1.2e-100 | 38.55 | Show/hide |
Query: WKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQLDVKN
W++ ++ E+ A + N TWT+T+ P KN V +W+F+VKY G+ R++ARLVA+GFTQ Y IDY+ETFAPVA++++ R +LSL + + +HQ+DVK
Subjt: WKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQLDVKN
Query: AFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFV--KSSNNKTAILIVYVDDIIITGNDVDEILN
AFLNG L+EE+YM++P G+ S+N VCKL K++YGLKQ+ R WF+ F + L + + D +++ K + N+ +++YVDD++I D+ + N
Subjt: AFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFV--KSSNNKTAILIVYVDDIIITGNDVDEILN
Query: LKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDIAYSV
KR L +F + DL +++F+G+ + + I +SQ Y+ +L RPD+ +V
Subjt: LKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDIAYSV
Query: SIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSS--RMVELYTDASWAGELTDRKCTTGYCSYVWG-NLVTWRSKKQAVVARSSAEAEYRALAL
+I S+Y + N + R+L+YLKGT L+FKK+ + + Y D+ WAG DRK TTGY ++ NL+ W +K+Q VA SS EAEY AL
Subjt: SIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSS--RMVELYTDASWAGELTDRKCTTGYCSYVWG-NLVTWRSKKQAVVARSSAEAEYRALAL
Query: GICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLI
+ E +W++ LLT + I +N +K++ D+Q ISIA NP H R KHI+I HF E+V N ++ L Y+P+ NQ+ADI TK LP A F E KLGL+
Subjt: GICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.4e-94 | 37.57 | Show/hide |
Query: PQTIHDALKDP---KWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSL
P+++ + L P + K + EE+++L+ NGT+ L +LP GK P+ CKW+F +K D + R++ARLV KGF Q GID+ E F+PV K+ ++R +LSL
Subjt: PQTIHDALKDP---KWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSL
Query: AVNQDWPLHQLDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKS-SNNKTAILIVYVD
A + D + QLDVK AFL+GDLEEE+YM+ P G E ++VCKL KSLYGLKQ+PR W+ +F + Y + +D ++ K S N IL++YVD
Subjt: AVNQDWPLHQLDVKNAFLNGDLEEEVYMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKS-SNNKTAILIVYVD
Query: DIIITGNDVDEILNLKRMLATEFEIKDLGSLRYFLGMEVA--RSNNGIIISQRNYILDLL----------------------------------------
D++I G D I LK L+ F++KDLG + LGM++ R++ + +SQ YI +L
Subjt: DIIITGNDVDEILNLKRMLATEFEIKDLGSLRYFLGMEVA--RSNNGIIISQRNYILDLL----------------------------------------
Query: ---------------RPDIAYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRS
RPDIA++V + S+++ NP + H AV IL+YL+GT G L F S +++ YTDA AG++ +RK +TGY G ++W+S
Subjt: ---------------RPDIAYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRS
Query: KKQAVVARSSAEAEYRALALGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILT
K Q VA S+ EAEY A E IW+++ L EL + + V ++CDSQSAI ++KN ++H RTKHI++ H+I E V++ +++ + + AD+LT
Subjt: KKQAVVARSSAEAEYRALALGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILT
Query: KALPRASFEEFNSKLGLIS
K +PR FE +G+ S
Subjt: KALPRASFEEFNSKLGLIS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.1e-113 | 39.59 | Show/hide |
Query: QNHECQPPEPDSSSLNSTDENITSMAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFIS-QLDSIHIPQTIHDALKDPKWKKTVDEEIKAL
Q+ P S+S +ST S+ I H + G + P+ K ++ L + P+T ALKD +W+ + EI A
Subjt: QNHECQPPEPDSSSLNSTDENITSMAPVIDDLTLPIAKRKGVRSCTNHPIEKYVAYGKLLPDYKAFIS-QLDSIHIPQTIHDALKDPKWKKTVDEEIKAL
Query: ESNGTWTLTQLPHGK-NPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQLDVKNAFLNGDLEEEV
N TW L P VGC+WIFT KY SDGS+ R++ARLVAKG+ Q G+DY ETF+PV K ++R++L +AV++ WP+ QLDV NAFL G L ++V
Subjt: ESNGTWTLTQLPHGK-NPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQLDVKNAFLNGDLEEEV
Query: YMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSNNKTAILIVYVDDIIITGNDVDEILNLKRMLATEFEIKD
YM PPG DK N VCKLRK+LYGLKQ+PRAW+ L+ G+ +D +LFV ++VYVDDI+ITGND + N L+ F +KD
Subjt: YMKIPPGMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSNNKTAILIVYVDDIIITGNDVDEILNLKRMLATEFEIKD
Query: LGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDIAYSVSIGSQYMNNPNER
L YFLG+E R G+ +SQR YILDLL RPDI+Y+V+ SQ+M+ P E
Subjt: LGSLRYFLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDIAYSVSIGSQYMNNPNER
Query: HLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALALGICEGIWIQKLLTELK
HL A+ RIL+YL GTP HG+ KK ++ + Y+DA WAG+ D T GY Y+ + ++W SKKQ V RSS EAEYR++A E WI LLTEL
Subjt: HLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALALGICEGIWIQKLLTELK
Query: IDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGL
I ++CD+ A + NP+ H R KHI ID HFI +V + + + +V + +Q+AD LTK L R +F+ F SK+G+
Subjt: IDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.8e-111 | 38.24 | Show/hide |
Query: PEPDSSSLNSTDENITSMAPVIDDLTLPIAKRKGVRSCTN-HPIEKYVAYGKLLPDYK-AFISQLDSIHIPQTIHDALKDPKWKKTVDEEIKALESNGTW
P S NS + TS P+ L P + ++ N H + G P+ K ++ + L + P+T A+KD +W++ + EI A N TW
Subjt: PEPDSSSLNSTDENITSMAPVIDDLTLPIAKRKGVRSCTN-HPIEKYVAYGKLLPDYK-AFISQLDSIHIPQTIHDALKDPKWKKTVDEEIKALESNGTW
Query: TLT-QLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQLDVKNAFLNGDLEEEVYMKIPP
L P VGC+WIFT K+ SDGS+ R++ARLVAKG+ Q G+DY ETF+PV K ++R++L +AV++ WP+ QLDV NAFL G L +EVYM PP
Subjt: TLT-QLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQLDVKNAFLNGDLEEEVYMKIPP
Query: GMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSNNKTAILIVYVDDIIITGNDVDEILNLKRMLATEFEIKDLGSLRY
G DK + VC+LRK++YGLKQ+PRAW+ L+ G+ +D +LFV ++VYVDDI+ITGND + + L+ F +K+ L Y
Subjt: GMEDKSNNNLVCKLRKSLYGLKQSPRAWFDRFAKTLIKSGYYQCQADHTLFVKSSNNKTAILIVYVDDIIITGNDVDEILNLKRMLATEFEIKDLGSLRY
Query: FLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDIAYSVSIGSQYMNNPNERHLGAVN
FLG+E R G+ +SQR Y LDLL RPD++Y+V+ SQYM+ P + H A+
Subjt: FLGMEVARSNNGIIISQRNYILDLL------------------------------------------------RPDIAYSVSIGSQYMNNPNERHLGAVN
Query: RILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALALGICEGIWIQKLLTELKIDTQNT
R+L+YL GTP HG+ KK ++ + Y+DA WAG+ D T GY Y+ + ++W SKKQ V RSS EAEYR++A E WI LLTEL I +
Subjt: RILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALALGICEGIWIQKLLTELKIDTQNT
Query: VKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLISL
++CD+ A + NP+ H R KHI +D HFI +V + + + +V + +Q+AD LTK L R +F+ F+ K+G+I +
Subjt: VKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFIFEKVNNRIVELNYVPSRNQVADILTKALPRASFEEFNSKLGLISL
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G32000.1 DNA topoisomerase, type IA, core | 5.2e-14 | 30.71 | Show/hide |
Query: IPTYVSGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDANTRFTPTNLGEALVMGYDDMGYKLWKPHLRAVMEH
+P+++ G++ + L G T PP L+E++L+S M+K GIGTDA++ HI + +R Y + + PT LG L+ GY + L P +R+ +E
Subjt: IPTYVSGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDANTRFTPTNLGEALVMGYDDMGYKLWKPHLRAVMEH
Query: EMKSVSEGTKRKDEFLATSLQQMKTCF
++ V++G + +QQ + F
Subjt: EMKSVSEGTKRKDEFLATSLQQMKTCF
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.2e-111 | 40.76 | Show/hide |
Query: VRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDALKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLV
V S T H I ++++Y K+ P Y +F+ + P T ++A + W +D+EI A+E+ TW + LP K P+GCKW++ +KY SDG++ER++ARLV
Subjt: VRSCTNHPIEKYVAYGKLLPDYKAFISQLDSIHIPQTIHDALKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLV
Query: AKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQLDVKNAFLNGDLEEEVYMKIPPGMEDKSNN----NLVCKLRKSLYGLKQSPRAWFDRFA
AKG+TQ GID+ ETF+PV KL +V+++L+++ ++ LHQLD+ NAFLNGDL+EE+YMK+PPG + + N VC L+KS+YGLKQ+ R WF +F+
Subjt: AKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAVNQDWPLHQLDVKNAFLNGDLEEEVYMKIPPGMEDKSNN----NLVCKLRKSLYGLKQSPRAWFDRFA
Query: KTLIKSGYYQCQADHTLFVKSSNNKTAILIVYVDDIIITGNDVDEILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL--------
TLI G+ Q +DHT F+K + ++VYVDDIII N+ + LK L + F+++DLG L+YFLG+E+ARS GI I QR Y LDLL
Subjt: KTLIKSGYYQCQADHTLFVKSSNNKTAILIVYVDDIIITGNDVDEILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNYILDLL--------
Query: ----------------------------------------RPDIAYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWA
R DI+++V+ SQ+ P H AV +IL Y+KGT G GL + + +++++DAS+
Subjt: ----------------------------------------RPDIAYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWA
Query: GELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALALGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFI
R+ T GYC ++ +L++W+SKKQ VV++SSAEAEYRAL+ E +W+ + EL++ +FCD+ +AI IA N + H+RTKHIE D H +
Subjt: GELTDRKCTTGYCSYVWGNLVTWRSKKQAVVARSSAEAEYRALALGICEGIWIQKLLTELKIDTQNTVKMFCDSQSAISIAKNPIHHDRTKHIEIDRHFI
Query: FEK
E+
Subjt: FEK
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| AT5G63920.1 topoisomerase 3alpha | 1.2e-66 | 80.27 | Show/hide |
Query: IKRNYLDVYRFESWGGSTIPTYVSGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDANTRFTPTNLGEALVMGY
+ +NYL+VYRFESWGGS IP Y GQQF+PTTLTLD+ VTRPPPLL EADLLSCMDK GIGTDATMHDHIKKLLDR YATKDANTRF+PTNLGEALVMGY
Subjt: IKRNYLDVYRFESWGGSTIPTYVSGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDANTRFTPTNLGEALVMGY
Query: DDMGYKLWKPHLRAVMEHEMKSVSEGTKRKDEFLATSLQQMKTCFLD
DDMGY+LWKP+LRA+MEH+M VS G K K E L T LQQMK CFLD
Subjt: DDMGYKLWKPHLRAVMEHEMKSVSEGTKRKDEFLATSLQQMKTCFLD
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 1.8e-30 | 33.18 | Show/hide |
Query: LIVYVDDIIITGNDVDEILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNY-----------------------------------------
L++YVDDI++TG+ + L L++ F +KDLG + YFLG+++ +G+ +SQ Y
Subjt: LIVYVDDIIITGNDVDEILNLKRMLATEFEIKDLGSLRYFLGMEVARSNNGIIISQRNY-----------------------------------------
Query: ------ILDLLRPDIAYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQA
L L RPDI+Y+V+I Q M+ P + R+L+Y+KGT HGL K+S V+ + D+ WAG + R+ TTG+C+++ N+++W +K+Q
Subjt: ------ILDLLRPDIAYSVSIGSQYMNNPNERHLGAVNRILKYLKGTPGHGLLFKKSSSRMVELYTDASWAGELTDRKCTTGYCSYVWGNLVTWRSKKQA
Query: VVARSSAEAEYRALALGICEGIW
V+RSS E EYRALAL E W
Subjt: VVARSSAEAEYRALALGICEGIW
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 3.0e-22 | 43.97 | Show/hide |
Query: KLLPDYKAFISQLDSIHIPQTIHDALKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETF
KL P Y I+ P+++ ALKDP W + + EE+ AL N TW L P +N +GCKW+F K SDG+++R +ARLVAKGF Q GI + ET+
Subjt: KLLPDYKAFISQLDSIHIPQTIHDALKDPKWKKTVDEEIKALESNGTWTLTQLPHGKNPVGCKWIFTVKYKSDGSVERFRARLVAKGFTQSYGIDYQETF
Query: APVAKLNTVRVLLSLA
+PV + T+R +L++A
Subjt: APVAKLNTVRVLLSLA
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