| GenBank top hits | e value | %identity | Alignment |
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| KAG5219081.1 Retrovirus-related polyprotein from transposon [Salix suchowensis] | 4.4e-65 | 60.62 | Show/hide |
Query: SPQPQDSSHQIVTNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSMTPEVGENFLLFKTTKEIWDAARDTYS
SP ++SS ++T HKL G+N+LQW+ SV ++ICG+G+D +LTG+ P +DP+FR+WKT++H++MSWL+NSMT E+GENFLL+ T KEIWDAAR+TYS
Subjt: SPQPQDSSHQIVTNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSMTPEVGENFLLFKTTKEIWDAARDTYS
Query: SFENSSALLAIETRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNKELDDVRGRIMGAKDLPSLR
+ +N+S L IE L+DLRQG+LNVTQYFN L R+WQ LDM+E + WKC D L+++IVE+KR +FLL LNK LD+VRGRIMG K LPSLR
Subjt: SFENSSALLAIETRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNKELDDVRGRIMGAKDLPSLR
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| PKA63925.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Apostasia shenzhenica] | 1.2e-78 | 69.38 | Show/hide |
Query: QMAKHGLASVSYENSPQP--QDSSHQIVTNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSMTPEVGENFLL
Q + + S S NS P D+S +VTNHKL GHNFLQW+QSVF+YICGRGKDGHLTG+ AP+ DPK+R+W+TDDHLVMSWL+NSMT EVGENFLL
Subjt: QMAKHGLASVSYENSPQP--QDSSHQIVTNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSMTPEVGENFLL
Query: FKTTKEIWDAARDTYSSFENSSALLAIETRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNKELDDVRGRIM
F+T KEIW+AAR+TYSS ENSS L IETRLYDLRQG+L+VTQYFN L R W LDMYE Y WKC ++ ALYKKIVE+KR ++FLL LNK+LD+VRGRIM
Subjt: FKTTKEIWDAARDTYSSFENSSALLAIETRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNKELDDVRGRIM
Query: GAKDLPSLR
G K LPS+R
Subjt: GAKDLPSLR
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| RVX18965.1 hypothetical protein CK203_007146 [Vitis vinifera] | 2.6e-65 | 55.25 | Show/hide |
Query: MAKHGLAS--VSYENSPQP-----------QDSSHQIVTNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSM
M K+G+AS VS SP+ DSS ++T HKL GHN+LQW+QSV ++ICG+GKD +LTG+ P+ +P FR WK ++ ++MSWL+NSM
Subjt: MAKHGLAS--VSYENSPQP-----------QDSSHQIVTNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSM
Query: TPEVGENFLLFKTTKEIWDAARDTYSSFENSSALLAIETRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNK
++GENFLLF T K+IWDAA++TYSS EN+S L +E+ L+D RQG+ +VTQY+N L R WQ LD++ET+ WKC +D A Y+KIVE+KR+ +F L LN+
Subjt: TPEVGENFLLFKTTKEIWDAARDTYSSFENSSALLAIETRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNK
Query: ELDDVRGRIMGAKDLPSLR
ELDDVRGRIMG K LPSLR
Subjt: ELDDVRGRIMGAKDLPSLR
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| XP_023738515.1 uncharacterized protein LOC111886493 [Lactuca sativa] | 1.6e-67 | 66.85 | Show/hide |
Query: TNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSMTPEVGENFLLFKTTKEIWDAARDTYSSFENSSALLAIE
T+HKL G NF QW+QSVF++ICGR KDGHLTG+T A D KDPKFR+W+T+DHLVMSWL+NSMT EVGENFLL+KT +EIW+AA++TYSS ENSS L +E
Subjt: TNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSMTPEVGENFLLFKTTKEIWDAARDTYSSFENSSALLAIE
Query: TRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNKELDDVRGRIMGAKDLPSLR
T+LYDLRQGDL+VTQYF+LL R W LD++ET+ WKC +D+A Y+ +V +KR +RFLL LNK+LD VR R+MG LP+ R
Subjt: TRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNKELDDVRGRIMGAKDLPSLR
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| XP_034898954.1 uncharacterized protein LOC118037156 [Populus alba] | 3.0e-66 | 62.96 | Show/hide |
Query: QDSSHQIVTNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSMTPEVGENFLLFKTTKEIWDAARDTYSSFEN
+ +SHQI T HKL G+N+LQW+ SV ++ICG+G+D +LTGD P+ DP FR+WKT++H+VMSWL+NSMT E+GENFLL+ T KEIW+AAR+TYSS EN
Subjt: QDSSHQIVTNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSMTPEVGENFLLFKTTKEIWDAARDTYSSFEN
Query: SSALLAIETRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNKELDDVRGRIMGAKDLPSLR
+S L IE L+DLRQG+L++TQ+FN L R+WQHLDM+ET+ W C ED LY++IVE+KR +FLL LNK LD+VRGRIMG K LP+LR
Subjt: SSALLAIETRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNKELDDVRGRIMGAKDLPSLR
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A2I0B7Z4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.7e-79 | 69.38 | Show/hide |
Query: QMAKHGLASVSYENSPQP--QDSSHQIVTNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSMTPEVGENFLL
Q + + S S NS P D+S +VTNHKL GHNFLQW+QSVF+YICGRGKDGHLTG+ AP+ DPK+R+W+TDDHLVMSWL+NSMT EVGENFLL
Subjt: QMAKHGLASVSYENSPQP--QDSSHQIVTNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSMTPEVGENFLL
Query: FKTTKEIWDAARDTYSSFENSSALLAIETRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNKELDDVRGRIM
F+T KEIW+AAR+TYSS ENSS L IETRLYDLRQG+L+VTQYFN L R W LDMYE Y WKC ++ ALYKKIVE+KR ++FLL LNK+LD+VRGRIM
Subjt: FKTTKEIWDAARDTYSSFENSSALLAIETRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNKELDDVRGRIM
Query: GAKDLPSLR
G K LPS+R
Subjt: GAKDLPSLR
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| A0A438IAX1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.7e-65 | 54.79 | Show/hide |
Query: MAKHGLAS--VSYENSPQP-----------QDSSHQIVTNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSM
M K+G+AS VS SP+ DSS ++T HKL GHN+LQW+QSV ++ICG+GKD +LTG+ P+ +P FR WK ++ ++MSWL+NSM
Subjt: MAKHGLAS--VSYENSPQP-----------QDSSHQIVTNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSM
Query: TPEVGENFLLFKTTKEIWDAARDTYSSFENSSALLAIETRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNK
++GENFLLF T K+IWDAA++TYSS EN+S L +E+ L+D RQG+ +VTQY+N L R WQ LD++ET+ WKC +D A Y++IVE+KR+ +F L LN+
Subjt: TPEVGENFLLFKTTKEIWDAARDTYSSFENSSALLAIETRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNK
Query: ELDDVRGRIMGAKDLPSLR
ELDDVRGRIMG K LPSLR
Subjt: ELDDVRGRIMGAKDLPSLR
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| A0A438KCP1 Retrotrans_gag domain-containing protein | 1.2e-65 | 55.25 | Show/hide |
Query: MAKHGLAS--VSYENSPQP-----------QDSSHQIVTNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSM
M K+G+AS VS SP+ DSS ++T HKL GHN+LQW+QSV ++ICG+GKD +LTG+ P+ +P FR WK ++ ++MSWL+NSM
Subjt: MAKHGLAS--VSYENSPQP-----------QDSSHQIVTNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSM
Query: TPEVGENFLLFKTTKEIWDAARDTYSSFENSSALLAIETRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNK
++GENFLLF T K+IWDAA++TYSS EN+S L +E+ L+D RQG+ +VTQY+N L R WQ LD++ET+ WKC +D A Y+KIVE+KR+ +F L LN+
Subjt: TPEVGENFLLFKTTKEIWDAARDTYSSFENSSALLAIETRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNK
Query: ELDDVRGRIMGAKDLPSLR
ELDDVRGRIMG K LPSLR
Subjt: ELDDVRGRIMGAKDLPSLR
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| A0A438KNE1 Copia protein | 2.8e-65 | 54.79 | Show/hide |
Query: MAKHGLAS--VSYENSPQP-----------QDSSHQIVTNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSM
M K+G+AS VS SP+ DSS ++T HKL GHN+LQW+QSV ++ICG+GKD +LTG+ P+ +P FR WK +++++MSWL+NSM
Subjt: MAKHGLAS--VSYENSPQP-----------QDSSHQIVTNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSM
Query: TPEVGENFLLFKTTKEIWDAARDTYSSFENSSALLAIETRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNK
++GENFLLF T K+IWDAA++TYSS EN+S L +E+ L+D RQG+ +VTQY+N L R WQ LD++ET+ WKC +D A Y++IVE+KR+ +F L LN+
Subjt: TPEVGENFLLFKTTKEIWDAARDTYSSFENSSALLAIETRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNK
Query: ELDDVRGRIMGAKDLPSLR
ELDDVRGRIMG K LPSLR
Subjt: ELDDVRGRIMGAKDLPSLR
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| A5B2V6 Integrase catalytic domain-containing protein | 2.8e-65 | 54.79 | Show/hide |
Query: MAKHGLAS--VSYENSPQP-----------QDSSHQIVTNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSM
M K+G+AS VS SP+ DSS ++T HKL GHN+LQW+QSV ++ICG+GKD +LTG+ P++ P FR WK ++ ++MSWL+NSM
Subjt: MAKHGLAS--VSYENSPQP-----------QDSSHQIVTNHKLQGHNFLQWNQSVFIYICGRGKDGHLTGDTPAPDVKDPKFRSWKTDDHLVMSWLLNSM
Query: TPEVGENFLLFKTTKEIWDAARDTYSSFENSSALLAIETRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNK
++GENFLLF+T K+IWD A++TYSS EN S L +E+ L+D RQG+ +VTQY+N L R WQ LD++ET+ WKC +D A Y+KIVE+KR+ +F L LN+
Subjt: TPEVGENFLLFKTTKEIWDAARDTYSSFENSSALLAIETRLYDLRQGDLNVTQYFNLLVRNWQHLDMYETYEWKCGEDMALYKKIVEKKRILRFLLRLNK
Query: ELDDVRGRIMGAKDLPSLR
ELDDVRGRIMG K LPSLR
Subjt: ELDDVRGRIMGAKDLPSLR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| C7J0A2 DNA topoisomerase 3-alpha | 4.0e-37 | 66.39 | Show/hide |
Query: IVQEQQEHQIWGAYAQRLLDPGSGLWRNPSGGGHDDKAHPPIHPTKFSAGERGWSQDHHSSVINNSEIFSSQRLYELVVRHFLACVSQPAVGAVTTVEID
IV EQ H WG YAQRLLDP + LWRNPS GGHDDKAHPPIHPTKFSAGE W+ +H ++LYELVVRHFLAC SQPAVGA TTVEID
Subjt: IVQEQQEHQIWGAYAQRLLDPGSGLWRNPSGGGHDDKAHPPIHPTKFSAGERGWSQDHHSSVINNSEIFSSQRLYELVVRHFLACVSQPAVGAVTTVEID
Query: IAGELFSTSGRMILAVSSL
IAGE F+ SGR++LA + L
Subjt: IAGELFSTSGRMILAVSSL
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| O70157 DNA topoisomerase 3-alpha | 2.7e-17 | 43.8 | Show/hide |
Query: DARAARIVQEQQEHQIWGAYAQRLLDPGSGLWRNPSGGGHDDKAHPPIHPTKFSAGERGWSQDHHSSVINNSEIFSSQRLYELVVRHFLACVSQPAVGAV
D +V++Q WGA+AQ +L+ G P G D+AHPPIHPTK+++G +G +RLYE +VRHFLAC SQ A G
Subjt: DARAARIVQEQQEHQIWGAYAQRLLDPGSGLWRNPSGGGHDDKAHPPIHPTKFSAGERGWSQDHHSSVINNSEIFSSQRLYELVVRHFLACVSQPAVGAV
Query: TTVEIDIAGELFSTSGRMILA
TTVEIDIA E F G +ILA
Subjt: TTVEIDIAGELFSTSGRMILA
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| Q13472 DNA topoisomerase 3-alpha | 4.6e-17 | 44.63 | Show/hide |
Query: DARAARIVQEQQEHQIWGAYAQRLLDPGSGLWRNPSGGGHDDKAHPPIHPTKFSAGERGWSQDHHSSVINNSEIFSSQRLYELVVRHFLACVSQPAVGAV
D +V++Q WGA+AQ +L+ G P G D+AHPPIHPTK++ +G QRLYE +VRHFLAC SQ A G
Subjt: DARAARIVQEQQEHQIWGAYAQRLLDPGSGLWRNPSGGGHDDKAHPPIHPTKFSAGERGWSQDHHSSVINNSEIFSSQRLYELVVRHFLACVSQPAVGAV
Query: TTVEIDIAGELFSTSGRMILA
TTVEIDIA E F G MILA
Subjt: TTVEIDIAGELFSTSGRMILA
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| Q9LVP1 DNA topoisomerase 3-alpha | 1.1e-37 | 63.08 | Show/hide |
Query: RLDARAARIVQEQQEHQIWGAYAQRLLDPGSGLWRNPSGGGHDDKAHPPIHPTKFSAGERGWSQDHHSSVINNSEIFSSQRLYELVVRHFLACVSQPAVG
R D RA +V+EQ H WG+YAQRLL+P GLWRNP+ GGHDDKAHPPIHPTKFS+GE WS+DH +YELVVRH+LACVSQPAV
Subjt: RLDARAARIVQEQQEHQIWGAYAQRLLDPGSGLWRNPSGGGHDDKAHPPIHPTKFSAGERGWSQDHHSSVINNSEIFSSQRLYELVVRHFLACVSQPAVG
Query: AVTTVEIDIAGELFSTSGRMILAVSSLHKF
A TTVEIDIAGE FS SGR ILA + L +
Subjt: AVTTVEIDIAGELFSTSGRMILAVSSLHKF
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| Q9NG98 DNA topoisomerase 3-alpha | 3.2e-18 | 46.09 | Show/hide |
Query: ARIVQEQQEHQIWGAYAQRLLDPGSGLWRNPSGGGHDDKAHPPIHPTKFSAGERGWSQDHHSSVINNSEIFSSQRLYELVVRHFLACVSQPAVGAVTTVE
A +V+ Q H+ WGA+AQR+++ G NP G D+AHPPIHPTK + +G + R+YELVVRHFLACVS+ AVG+ T V
Subjt: ARIVQEQQEHQIWGAYAQRLLDPGSGLWRNPSGGGHDDKAHPPIHPTKFSAGERGWSQDHHSSVINNSEIFSSQRLYELVVRHFLACVSQPAVGAVTTVE
Query: IDIAGELFSTSGRMI
IDIAGE F+ +G +I
Subjt: IDIAGELFSTSGRMI
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