| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0047995.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] | 1.0e-85 | 34.51 | Show/hide |
Query: KKKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTD
+KKI+AIL Q K I D + LP +T+ EK +M E AY T++L LS+ VLR V + T ++W KL LYLTK LPNK Y++E+FF YKMD SK + +
Subjt: KKKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTD
Query: NLDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDNKNQGDDDK
NLD+F+K+ + IG+K+ DEN+A ILLNSL + YREVK A+KYG + +T ++ A++T LE+ KKE + E L ++G+S++ K + K
Subjt: NLDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDNKNQGDDDK
Query: AGKSKIRCNFCHKDGHLKKNCFFLKRKQNQKSKKGKPAEASV--GENSLTYSDALATSDRSSKQNESLGETRLDL-------------------------
+ +C CHK+GH KKNC KS++ +EA+V G NS +D +++ + E L + D+
Subjt: AGKSKIRCNFCHKDGHLKKNCFFLKRKQNQKSKKGKPAEASV--GENSLTYSDALATSDRSSKQNESLGETRLDL-------------------------
Query: --------------------GLWMFFPHDSIKR---NVRHVPTLKRNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALV
G HD + R NVR+VP LKRNLISLG LD GC + G +V K S L G +GLYV++ + +A +
Subjt: --------------------GLWMFFPHDSIKR---NVRHVPTLKRNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALV
Query: VTNDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCEHCVLG--------------------------------------------------
+ LWHKR++H+S +GLQ L++QG+L EL FCEHC++G
Subjt: VTNDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCEHCVLG--------------------------------------------------
Query: ----------------------------------------------FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAET
F++FCK GI RH TV YTPQQNG+AER NRTIMER RCLL++A LP KFW E
Subjt: ----------------------------------------------FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAET
Query: SSYTVYTLNRCPHSSINLLTPEE
+ Y +NR P +++NL TP+E
Subjt: SSYTVYTLNRCPHSSINLLTPEE
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| KAA0050719.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 2.8e-86 | 34.67 | Show/hide |
Query: KKKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTD
+KKI+AIL Q K I D + LP +T+ EK +M E AY T++L LS+ VLR V + T ++W KL LYLTK L NK Y++E+FF YKMD SKS+ +
Subjt: KKKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTD
Query: NLDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDNKNQGDDDK
NLD+F+K+ + IG+K+ DEN+A ILLNSL + YREVK A+KYGR+ +T ++ A++T LE+ KKE + E L ++G+S++ K + K
Subjt: NLDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDNKNQGDDDK
Query: AGKSKIRCNFCHKDGHLKKNCFFLKRKQNQKSKKGKPAEASV--GENSLTYSDALATSDRSSKQNESLGETRLDL-------------------------
+ +C CHK+GH KKNC KS++ +EA+V G NS +D +++ + E L + D+
Subjt: AGKSKIRCNFCHKDGHLKKNCFFLKRKQNQKSKKGKPAEASV--GENSLTYSDALATSDRSSKQNESLGETRLDL-------------------------
Query: --------------------GLWMFFPHDSIKR---NVRHVPTLKRNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALV
G HD + R NVR+VP LKRNLISLG LD GC + G +V K S L G +GLYV++ + +A +
Subjt: --------------------GLWMFFPHDSIKR---NVRHVPTLKRNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALV
Query: VTNDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCEHCVLG--------------------------------------------------
+ LWHKR++H+S +GLQ L++QG+L EL FCEHC++G
Subjt: VTNDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCEHCVLG--------------------------------------------------
Query: ----------------------------------------------FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAET
F++FCK GI RH TV YTPQQNG+AER NRTIMER RCLL++A LP KFW E
Subjt: ----------------------------------------------FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAET
Query: SSYTVYTLNRCPHSSINLLTPEE
+ Y +NR P +++NL TP+E
Subjt: SSYTVYTLNRCPHSSINLLTPEE
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| KAA0054988.1 hypothetical protein E6C27_scaffold43052G001360 [Cucumis melo var. makuwa] | 1.0e-80 | 36.98 | Show/hide |
Query: KKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTDN
K+I AILG Q ALKA +DPKELP T+T+ E++ ++E AY TL++N+++NVLRQV+++ A+
Subjt: KKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTDN
Query: LDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDNKNQGDDDKA
++FKKL++ F G+KL E+EA IL+NS+ D Y+EVK+ALKYGRE IT + +++A+++ ELEL+T+ K + +E LF KGK+ NKNQ
Subjt: LDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDNKNQGDDDKA
Query: GKSKIRCNFCHKDGHLKKNC---------------------FFLKRKQNQKSKKGKPAE-----ASVGENSLTYSDALATSDRSSKQNESLGET-RLDLG
K ++C CHK GH K+NC F + + Q+ + + E VG + Y++ L T+++ + + ++ E LD G
Subjt: GKSKIRCNFCHKDGHLKKNC---------------------FFLKRKQNQKSKKGKPAE-----ASVGENSLTYSDALATSDRSSKQNESLGET-RLDLG
Query: LWMFFPHDSIKRNVRHVPTLKRNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALVVTNDSLTEGDLWHKRISHISNKGL
+ RHVP LKRNLISLGMLD +GC G +V + + +L K+ LY +K+ + AL+ + E +LWH+R+SHIS KGL
Subjt: LWMFFPHDSIKRNVRHVPTLKRNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALVVTNDSLTEGDLWHKRISHISNKGL
Query: QVLAKQGILPQGVCDELKFCEHCVLGFDKFCK----EH----------------------GILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPE
L K G++ L FCEHC+ G K K EH G RH+TV YTPQQNGVAER+NRT+MERVRC++S+A + E
Subjt: QVLAKQGILPQGVCDELKFCEHCVLGFDKFCK----EH----------------------GILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPE
Query: KFWAETSSYTVYTLNRCPHSSINLLTPEER
FWAE + YT+ R SI++ TPEER
Subjt: KFWAETSSYTVYTLNRCPHSSINLLTPEER
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| PKU72844.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum] | 1.6e-81 | 33.74 | Show/hide |
Query: KIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTDNL
K++AIL QQ KA+ ELP+TM+ EK ++Q+ A+ +++L L++ VLR+V T ++W KL ELY K LPN+ YL+E+FF YKMD +KS+ DNL
Subjt: KIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTDNL
Query: DDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNG------KDNKNQG
D+F KL + + + K+EDE++A ILLNSL + R K LKYGRE IT D++ +A+ + L+++ +K S EGL +G+S++ G K
Subjt: DDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNG------KDNKNQG
Query: DDDKAGKSKIRCNFCHKDGHLKKNCFFLKRKQNQKSKKGKPAEASVGENSLTYSDALATSDRSSKQNESLGETRL-DLGLWMFFPHDSIKRNVRHVPTLK
K ++C C+K GH+++ C ++N K K +A++ + +D L SD N++ + + + M H I ++VRHVP LK
Subjt: DDDKAGKSKIRCNFCHKDGHLKKNCFFLKRKQNQKSKKGKPAEASVGENSLTYSDALATSDRSSKQNESLGETRL-DLGLWMFFPHDSIKRNVRHVPTLK
Query: RNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALVVTNDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCE
RNLISLG LD G +R G + K + ++ G+K NGLYV++ A ++ V +L + LWH+R+ H+S++GL L KQG+ ++ FCE
Subjt: RNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALVVTNDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCE
Query: HCVLG-----------------------------------------------------------------------------------------------
C++G
Subjt: HCVLG-----------------------------------------------------------------------------------------------
Query: -FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAETSSYTVYTLNRCPHSSINLLTPEE
F+KFC + GI+RHKTV +TPQQNG+AER+NRT+++RVRCLL + L + FW E S Y +NR P S+IN TP+E
Subjt: -FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAETSSYTVYTLNRCPHSSINLLTPEE
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| TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 1.9e-87 | 34.83 | Show/hide |
Query: KKKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTD
+KKI+AIL Q K I D + LP +T+ EK +M E AY T++L LS+ VLR V + T ++W KL LYLTK LPNK Y++E+FF YKMD SKS+ +
Subjt: KKKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTD
Query: NLDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDNKNQGDDDK
NLD+F+K+ + IG+K+ DEN+A ILLNSL + YREVK A+KYGR+ +T ++ A++T LE+ KKE + E L ++G+S++ K + K
Subjt: NLDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDNKNQGDDDK
Query: AGKSKIRCNFCHKDGHLKKNCFFLKRKQNQKSKKGKPAEASV--GENSLTYSDALATSDRSSKQNESLGETRLDL-------------------------
+ +C CHK+GH KKNC KS++ +EA+V G NS +D +++ + E L + D+
Subjt: AGKSKIRCNFCHKDGHLKKNCFFLKRKQNQKSKKGKPAEASV--GENSLTYSDALATSDRSSKQNESLGETRLDL-------------------------
Query: --------------------GLWMFFPHDSIKR---NVRHVPTLKRNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALV
G HD + R NVR+VP LKRNLISLG LD GC + G +V K S L G +GLYV++ + +A +
Subjt: --------------------GLWMFFPHDSIKR---NVRHVPTLKRNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALV
Query: VTNDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCEHCVLG--------------------------------------------------
+ LWHKR++H+S +GLQ L++QG+L EL FCEHC++G
Subjt: VTNDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCEHCVLG--------------------------------------------------
Query: ----------------------------------------------FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAET
F++FCK GI RH TV YTPQQNG+AER NRTIMER RCLL++A LP KFW E
Subjt: ----------------------------------------------FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAET
Query: SSYTVYTLNRCPHSSINLLTPEE
+ Y +NR P +++NL TP+E
Subjt: SSYTVYTLNRCPHSSINLLTPEE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2I0WB13 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.6e-82 | 33.74 | Show/hide |
Query: KIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTDNL
K++AIL QQ KA+ ELP+TM+ EK ++Q+ A+ +++L L++ VLR+V T ++W KL ELY K LPN+ YL+E+FF YKMD +KS+ DNL
Subjt: KIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTDNL
Query: DDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNG------KDNKNQG
D+F KL + + + K+EDE++A ILLNSL + R K LKYGRE IT D++ +A+ + L+++ +K S EGL +G+S++ G K
Subjt: DDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNG------KDNKNQG
Query: DDDKAGKSKIRCNFCHKDGHLKKNCFFLKRKQNQKSKKGKPAEASVGENSLTYSDALATSDRSSKQNESLGETRL-DLGLWMFFPHDSIKRNVRHVPTLK
K ++C C+K GH+++ C ++N K K +A++ + +D L SD N++ + + + M H I ++VRHVP LK
Subjt: DDDKAGKSKIRCNFCHKDGHLKKNCFFLKRKQNQKSKKGKPAEASVGENSLTYSDALATSDRSSKQNESLGETRL-DLGLWMFFPHDSIKRNVRHVPTLK
Query: RNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALVVTNDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCE
RNLISLG LD G +R G + K + ++ G+K NGLYV++ A ++ V +L + LWH+R+ H+S++GL L KQG+ ++ FCE
Subjt: RNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALVVTNDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCE
Query: HCVLG-----------------------------------------------------------------------------------------------
C++G
Subjt: HCVLG-----------------------------------------------------------------------------------------------
Query: -FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAETSSYTVYTLNRCPHSSINLLTPEE
F+KFC + GI+RHKTV +TPQQNG+AER+NRT+++RVRCLL + L + FW E S Y +NR P S+IN TP+E
Subjt: -FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAETSSYTVYTLNRCPHSSINLLTPEE
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| A0A5A7U2U7 Retrotransposon protein, putative, Ty1-copia sub-class | 5.1e-86 | 34.51 | Show/hide |
Query: KKKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTD
+KKI+AIL Q K I D + LP +T+ EK +M E AY T++L LS+ VLR V + T ++W KL LYLTK LPNK Y++E+FF YKMD SK + +
Subjt: KKKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTD
Query: NLDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDNKNQGDDDK
NLD+F+K+ + IG+K+ DEN+A ILLNSL + YREVK A+KYG + +T ++ A++T LE+ KKE + E L ++G+S++ K + K
Subjt: NLDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDNKNQGDDDK
Query: AGKSKIRCNFCHKDGHLKKNCFFLKRKQNQKSKKGKPAEASV--GENSLTYSDALATSDRSSKQNESLGETRLDL-------------------------
+ +C CHK+GH KKNC KS++ +EA+V G NS +D +++ + E L + D+
Subjt: AGKSKIRCNFCHKDGHLKKNCFFLKRKQNQKSKKGKPAEASV--GENSLTYSDALATSDRSSKQNESLGETRLDL-------------------------
Query: --------------------GLWMFFPHDSIKR---NVRHVPTLKRNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALV
G HD + R NVR+VP LKRNLISLG LD GC + G +V K S L G +GLYV++ + +A +
Subjt: --------------------GLWMFFPHDSIKR---NVRHVPTLKRNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALV
Query: VTNDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCEHCVLG--------------------------------------------------
+ LWHKR++H+S +GLQ L++QG+L EL FCEHC++G
Subjt: VTNDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCEHCVLG--------------------------------------------------
Query: ----------------------------------------------FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAET
F++FCK GI RH TV YTPQQNG+AER NRTIMER RCLL++A LP KFW E
Subjt: ----------------------------------------------FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAET
Query: SSYTVYTLNRCPHSSINLLTPEE
+ Y +NR P +++NL TP+E
Subjt: SSYTVYTLNRCPHSSINLLTPEE
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| A0A5A7UB25 Putative gag-pol polyprotein | 1.3e-86 | 34.67 | Show/hide |
Query: KKKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTD
+KKI+AIL Q K I D + LP +T+ EK +M E AY T++L LS+ VLR V + T ++W KL LYLTK L NK Y++E+FF YKMD SKS+ +
Subjt: KKKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTD
Query: NLDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDNKNQGDDDK
NLD+F+K+ + IG+K+ DEN+A ILLNSL + YREVK A+KYGR+ +T ++ A++T LE+ KKE + E L ++G+S++ K + K
Subjt: NLDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDNKNQGDDDK
Query: AGKSKIRCNFCHKDGHLKKNCFFLKRKQNQKSKKGKPAEASV--GENSLTYSDALATSDRSSKQNESLGETRLDL-------------------------
+ +C CHK+GH KKNC KS++ +EA+V G NS +D +++ + E L + D+
Subjt: AGKSKIRCNFCHKDGHLKKNCFFLKRKQNQKSKKGKPAEASV--GENSLTYSDALATSDRSSKQNESLGETRLDL-------------------------
Query: --------------------GLWMFFPHDSIKR---NVRHVPTLKRNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALV
G HD + R NVR+VP LKRNLISLG LD GC + G +V K S L G +GLYV++ + +A +
Subjt: --------------------GLWMFFPHDSIKR---NVRHVPTLKRNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALV
Query: VTNDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCEHCVLG--------------------------------------------------
+ LWHKR++H+S +GLQ L++QG+L EL FCEHC++G
Subjt: VTNDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCEHCVLG--------------------------------------------------
Query: ----------------------------------------------FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAET
F++FCK GI RH TV YTPQQNG+AER NRTIMER RCLL++A LP KFW E
Subjt: ----------------------------------------------FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAET
Query: SSYTVYTLNRCPHSSINLLTPEE
+ Y +NR P +++NL TP+E
Subjt: SSYTVYTLNRCPHSSINLLTPEE
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| A0A5A7UJ23 Integrase catalytic domain-containing protein | 4.9e-81 | 36.98 | Show/hide |
Query: KKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTDN
K+I AILG Q ALKA +DPKELP T+T+ E++ ++E AY TL++N+++NVLRQV+++ A+
Subjt: KKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTDN
Query: LDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDNKNQGDDDKA
++FKKL++ F G+KL E+EA IL+NS+ D Y+EVK+ALKYGRE IT + +++A+++ ELEL+T+ K + +E LF KGK+ NKNQ
Subjt: LDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDNKNQGDDDKA
Query: GKSKIRCNFCHKDGHLKKNC---------------------FFLKRKQNQKSKKGKPAE-----ASVGENSLTYSDALATSDRSSKQNESLGET-RLDLG
K ++C CHK GH K+NC F + + Q+ + + E VG + Y++ L T+++ + + ++ E LD G
Subjt: GKSKIRCNFCHKDGHLKKNC---------------------FFLKRKQNQKSKKGKPAE-----ASVGENSLTYSDALATSDRSSKQNESLGET-RLDLG
Query: LWMFFPHDSIKRNVRHVPTLKRNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALVVTNDSLTEGDLWHKRISHISNKGL
+ RHVP LKRNLISLGMLD +GC G +V + + +L K+ LY +K+ + AL+ + E +LWH+R+SHIS KGL
Subjt: LWMFFPHDSIKRNVRHVPTLKRNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALVVTNDSLTEGDLWHKRISHISNKGL
Query: QVLAKQGILPQGVCDELKFCEHCVLGFDKFCK----EH----------------------GILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPE
L K G++ L FCEHC+ G K K EH G RH+TV YTPQQNGVAER+NRT+MERVRC++S+A + E
Subjt: QVLAKQGILPQGVCDELKFCEHCVLGFDKFCK----EH----------------------GILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPE
Query: KFWAETSSYTVYTLNRCPHSSINLLTPEER
FWAE + YT+ R SI++ TPEER
Subjt: KFWAETSSYTVYTLNRCPHSSINLLTPEER
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| A0A5D3DNU1 Putative gag-pol polyprotein | 9.2e-88 | 34.83 | Show/hide |
Query: KKKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTD
+KKI+AIL Q K I D + LP +T+ EK +M E AY T++L LS+ VLR V + T ++W KL LYLTK LPNK Y++E+FF YKMD SKS+ +
Subjt: KKKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTD
Query: NLDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDNKNQGDDDK
NLD+F+K+ + IG+K+ DEN+A ILLNSL + YREVK A+KYGR+ +T ++ A++T LE+ KKE + E L ++G+S++ K + K
Subjt: NLDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDNKNQGDDDK
Query: AGKSKIRCNFCHKDGHLKKNCFFLKRKQNQKSKKGKPAEASV--GENSLTYSDALATSDRSSKQNESLGETRLDL-------------------------
+ +C CHK+GH KKNC KS++ +EA+V G NS +D +++ + E L + D+
Subjt: AGKSKIRCNFCHKDGHLKKNCFFLKRKQNQKSKKGKPAEASV--GENSLTYSDALATSDRSSKQNESLGETRLDL-------------------------
Query: --------------------GLWMFFPHDSIKR---NVRHVPTLKRNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALV
G HD + R NVR+VP LKRNLISLG LD GC + G +V K S L G +GLYV++ + +A +
Subjt: --------------------GLWMFFPHDSIKR---NVRHVPTLKRNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALV
Query: VTNDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCEHCVLG--------------------------------------------------
+ LWHKR++H+S +GLQ L++QG+L EL FCEHC++G
Subjt: VTNDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCEHCVLG--------------------------------------------------
Query: ----------------------------------------------FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAET
F++FCK GI RH TV YTPQQNG+AER NRTIMER RCLL++A LP KFW E
Subjt: ----------------------------------------------FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAET
Query: SSYTVYTLNRCPHSSINLLTPEE
+ Y +NR P +++NL TP+E
Subjt: SSYTVYTLNRCPHSSINLLTPEE
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 3.9e-19 | 21.36 | Show/hide |
Query: KKKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTD
K +I+A+L +Q+ LK + L D + A T++ LS++ L TA +I L +Y K L ++ LR+R + K+ S+
Subjt: KKKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTD
Query: NLDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALK-YGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDN--KNQGD
+ F +L SE G K+E+ ++ LL +L Y + A++ E +T + + + E++++ + S + K+N KN+
Subjt: NLDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALK-YGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDN--KNQGD
Query: DDKA-----GKSKIRCNFCHKDGHLKKNCFFLKRKQNQKSKKGKPAEASVGENSLTYSDALATSDRSSKQNESLGETRLDLGLWMFFPHDS--IKRNVRH
K K K++C+ C ++GH+KK+CF KR N K+K+ + + + + + + ++ ++ G LD G +D +V
Subjt: DDKA-----GKSKIRCNFCHKDGHLKKNCFFLKRKQNQKSKKGKPAEASVGENSLTYSDALATSDRSSKQNESLGETRLDLGLWMFFPHDS--IKRNVRH
Query: VPTLK--------------------RNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVL--------VGVKMNGLYVIKDAEMIQTALVVTNDSLT-----
VP LK RN + + D + C+ G V + + + V + NGL V+K++ M+ V+ + +
Subjt: VPTLK--------------------RNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVL--------VGVKMNGLYVIKDAEMIQTALVVTNDSLT-----
Query: --EGDLWHKRISHISN-KGLQVLAKQGILPQGVCDEL----KFCEHCVLG--------------------------------------------------
LWH+R HIS+ K L++ K Q + + L + CE C+ G
Subjt: --EGDLWHKRISHISN-KGLQVLAKQGILPQGVCDEL----KFCEHCVLG--------------------------------------------------
Query: ------------------------------------------------FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWA
+FC + GI H TV +TPQ NGV+ER+ RTI E+ R ++S A L + FW
Subjt: ------------------------------------------------FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWA
Query: ETSSYTVYTLNRCPHSSI
E Y +NR P ++
Subjt: ETSSYTVYTLNRCPHSSI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.0e-48 | 25.48 | Show/hide |
Query: KKKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTD
+++++ +L QQ K + + P TM ++ ++ E A + L+LS++V+ ++D+DTA IWT+L LY++K L NK YL+++ + M +
Subjt: KKKIKAILGQQNALKAIQDPKELPTTMTQDEKDNMQEAAYGTLVLNLSNNVLRQVLDQDTAYKIWTKLHELYLTKDLPNKAYLRERFFTYKMDPSKSMTD
Query: NLDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDNKNQGDDDK
+L+ F L ++ +G K+E+E++A +LLNSL +Y + + +G+ I D+ SA+ E + +KK + + L ++G+ + + + N G
Subjt: NLDDFKKLSSEFKTIGDKLEDENEAFILLNSLLDNYREVKVALKYGREKITTDDIVSAVRTGELELQTQKKEISNSEGLFSKGKSKQNGKDNKNQGDDDK
Query: AGKSKIR-------CNFCHKDGHLKKNCFFLKRKQNQKS-KKGKPAEASVGENS----LTYSDALATSDRSSKQNE------------------------
GKSK R C C++ GH K++C ++ + + S +K A++ +N+ L ++ S ++E
Subjt: AGKSKIR-------CNFCHKDGHLKKNCFFLKRKQNQKS-KKGKPAEASVGENS----LTYSDALATSDRSSKQNE------------------------
Query: -----SLGETRL-------DLGLWMFFPHDSIKRNVRHVPTLKRNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALVVT
+G T D+ + + ++VRHVP L+ NLIS LD G E + + K S + GV LY +AE+ Q L
Subjt: -----SLGETRL-------DLGLWMFFPHDSIKRNVRHVPTLKRNLISLGMLDSIGCEYRGFGGTFEVMKDSKTVLVGVKMNGLYVIKDAEMIQTALVVT
Query: NDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCEHCVLG----------------------------------------------------
D ++ DLWHKR+ H+S KGLQ+LAK+ ++ +K C++C+ G
Subjt: NDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCEHCVLG----------------------------------------------------
Query: --------------------------------------------FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAETSS
F+++C HGI KTV TPQ NGVAER+NRTI+E+VR +L A LP+ FW E
Subjt: --------------------------------------------FDKFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAETSS
Query: YTVYTLNRCPHSSINLLTPE
Y +NR P + PE
Subjt: YTVYTLNRCPHSSINLLTPE
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| P93293 Uncharacterized mitochondrial protein AtMg00300 | 6.3e-09 | 34.88 | Show/hide |
Query: GTFEVMKDSKTVLVGVKMNGLYVIK-DAEMIQTALVVTNDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCEHCVLG
G +V+K +T+L G + + LY+++ E ++ L T + E LWH R++H+S +G+++L K+G L LKFCE C+ G
Subjt: GTFEVMKDSKTVLVGVKMNGLYVIK-DAEMIQTALVVTNDSLTEGDLWHKRISHISNKGLQVLAKQGILPQGVCDELKFCEHCVLG
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.9e-06 | 32.89 | Show/hide |
Query: KFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAETSSYTVYTLNRCPHSSINLLTPEER
++ +HGI + +TP+ NG++ER +R I+E LLS A +P+ +W + VY +NR P + L +P ++
Subjt: KFCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAETSSYTVYTLNRCPHSSINLLTPEER
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.7e-07 | 34.67 | Show/hide |
Query: FCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAETSSYTVYTLNRCPHSSINLLTPEER
+ +HGI + +TP+ NG++ER +R I+E LLS A +P+ +W S VY +NR P + L +P ++
Subjt: FCKEHGILRHKTVRYTPQQNGVAERLNRTIMERVRCLLSDAMLPEKFWAETSSYTVYTLNRCPHSSINLLTPEER
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