; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026542 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026542
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr10:38681128..38682264
RNA-Seq ExpressionLag0026542
SyntenyLag0026542
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023532393.1 uncharacterized protein LOC111794553 [Cucurbita pepo subsp. pepo]2.5e-2835.91Show/hide
Query:  MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRGSR--------------AIRADVTTLANTLKGITVVSNVQQPPVVEPAAVVNQVAAKSCVYY--
        +VDAS  GA+L+KT+NE YEILERI++ + QW++VR ++              +I+A + ++ N L+ + +  +      V  AA++NQ  A+SCVY   
Subjt:  MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRGSR--------------AIRADVTTLANTLKGITVVSNVQQPPVVEPAAVVNQVAAKSCVYY--

Query:  -------------------------------------GWRNHPNFAWGWQGSNLQALQAHQKVANQPRFVMQNQ-----QGLPQQNKQATHP--NSESSL
                                             GWRNHPNF W  QGS+ Q  Q   K    P F +QNQ     Q +  Q K  +     S +S+
Subjt:  -------------------------------------GWRNHPNFAWGWQGSNLQALQAHQKVANQPRFVMQNQ-----QGLPQQNKQATHP--NSESSL

Query:  EAMMKEYMAQTDATIQSNQASMRAVELQMGQLANELKAQPHGKIPLDTEHPRREDRKPS
        E++++EYMA+ D  IQS QAS+R +E+Q+GQLA EL+ +P GK+P +TE P+RE  K S
Subjt:  EAMMKEYMAQTDATIQSNQASMRAVELQMGQLANELKAQPHGKIPLDTEHPRREDRKPS

XP_030477908.1 uncharacterized protein LOC115694945 [Cannabis sativa]6.1e-2734.68Show/hide
Query:  MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRGS--------------RAIRADVTTLANTLKGITVVSNVQQPPVVEPAAVVNQVAAKSCVYYG-
        ++DAS  GA+L+K++NE +EILE I++ + QWSN R                 A+ A + ++ N LK +    ++     ++PAA + Q    SCV+ G 
Subjt:  MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRGS--------------RAIRADVTTLANTLKGITVVSNVQQPPVVEPAAVVNQVAAKSCVYYG-

Query:  ------------------------------------WRNHPNFAWGWQGSNLQALQAHQKVANQPRFVMQNQQGLPQQNKQATHPNSESSLEAMMKEYMA
                                            W+NHPNF+WG QG++     A  + A  P F  Q +     QN Q       SSLE++M++YMA
Subjt:  ------------------------------------WRNHPNFAWGWQGSNLQALQAHQKVANQPRFVMQNQQGLPQQNKQATHPNSESSLEAMMKEYMA

Query:  QTDATIQSNQASMRAVELQMGQLANELKAQPHGKIPLDTEHPRREDRK
        + DA IQS  AS+R +ELQ+G LANELKA+P G +P DTE+PRR+ ++
Subjt:  QTDATIQSNQASMRAVELQMGQLANELKAQPHGKIPLDTEHPRREDRK

XP_030494874.1 uncharacterized protein LOC115710657 [Cannabis sativa]1.8e-2637.22Show/hide
Query:  MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRGS--------------RAIRADVTTLANTLKGITVVSNVQQPPVVEPAAVV-------NQVAAK
        ++DAS  GA+L+K++NE +EILE I++ + QWSN R                 A+ A + ++ N LK +      + P   E    +       N  A  
Subjt:  MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRGS--------------RAIRADVTTLANTLKGITVVSNVQQPPVVEPAAVV-------NQVAAK

Query:  SCVYYGWRNHPNFAWGWQGSNLQALQAHQKVANQPRFVMQNQQGLPQQNKQATHPNSESSLEAMMKEYMAQTDATIQSNQASMRAVELQMGQLANELKAQ
        +     W+NHPN +WG QG++     A  + A  P F   +QQ    Q+ Q + P   SSLE++M++YMA+ DA IQS  AS+R +ELQ+G LANELKA+
Subjt:  SCVYYGWRNHPNFAWGWQGSNLQALQAHQKVANQPRFVMQNQQGLPQQNKQATHPNSESSLEAMMKEYMAQTDATIQSNQASMRAVELQMGQLANELKAQ

Query:  PHGKIPLDTEHPRREDRKPSNLL
        P G +P DTE+PRR+ ++  N +
Subjt:  PHGKIPLDTEHPRREDRKPSNLL

XP_030497888.1 uncharacterized protein LOC115713544 [Cannabis sativa]3.0e-2638.25Show/hide
Query:  MVDASVGGALLAKTFNEVYEILERISTYSCQWS--------NVRGSRAIRADVTTLANTLKGITVVSNVQQPPVVEPAAVVNQVAAKSCVYYG-------
        ++DAS  GA+L+K++NE +EILERI++ + QWS         V G   + A     A       ++ N+     ++PAA + Q A  SCVYYG       
Subjt:  MVDASVGGALLAKTFNEVYEILERISTYSCQWS--------NVRGSRAIRADVTTLANTLKGITVVSNVQQPPVVEPAAVVNQVAAKSCVYYG-------

Query:  -----WRNHPNFAWGWQGSNLQALQAHQKVANQPRFVMQNQQGLPQQNKQATHPNSESSLEAMMKEYMAQTDATIQSNQASMRAVELQMGQLANELKAQP
               +HPNF+WG QG++    QA  K +   RF   +QQ  PQQ  Q    +  SSLE++M++Y  + DA IQS  AS++ +E+Q+GQLAN+LK++P
Subjt:  -----WRNHPNFAWGWQGSNLQALQAHQKVANQPRFVMQNQQGLPQQNKQATHPNSESSLEAMMKEYMAQTDATIQSNQASMRAVELQMGQLANELKAQP

Query:  HGKIPLDTEHPRREDRK
         G +P DT++PRR+ ++
Subjt:  HGKIPLDTEHPRREDRK

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]1.5e-2537.86Show/hide
Query:  MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRG--SRAIRA-----DVTTLANTLKGIT-VVSNVQQPPVVEPAAVVNQVAAKSCVYYG-------
        ++DAS  GA+L+K++NE +EILERI++ + QWS  R   SR +        +T L   +  +T ++ N+     V+PAA + Q A  SCVY G       
Subjt:  MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRG--SRAIRA-----DVTTLANTLKGIT-VVSNVQQPPVVEPAAVVNQVAAKSCVYYG-------

Query:  ------------------------------WRNHPNFAWGWQG-SNLQALQAHQKVANQPRFVMQNQQGLPQQNKQATHPNSESSLEAMMKEYMAQTDAT
                                      W++HPNF+WG QG S+  A QA  K +  P F   +QQ  PQQ  Q    +  SSLE++M++YMA+ DA 
Subjt:  ------------------------------WRNHPNFAWGWQG-SNLQALQAHQKVANQPRFVMQNQQGLPQQNKQATHPNSESSLEAMMKEYMAQTDAT

Query:  IQSNQASMRAVELQMGQLANELKAQPHGKIPLDTEHPRREDRK
        IQS  AS+R +E+Q+GQLAN+LK +P G +P DTE+PRR+ ++
Subjt:  IQSNQASMRAVELQMGQLANELKAQPHGKIPLDTEHPRREDRK

TrEMBL top hitse value%identityAlignment
A0A6J1DW02 uncharacterized protein LOC1110248971.7e-1935.53Show/hide
Query:  MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRGSRA-----------------IRADVTTLANTLKGITVVSNVQQPPVVEPA-------AVVNQV
        M++ +  GA   KTFNE+ +IL  +++++  W + R   A                 ++ ++ T+   LK + +         ++P        A V QV
Subjt:  MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRGSRA-----------------IRADVTTLANTLKGITVVSNVQQPPVVEPA-------AVVNQV

Query:  AAKSCVYYGWRNHPNFAWGWQGSNLQALQAHQKVANQPRFVMQNQQGLP---QQNKQATH----PNSESSLEAMMKEYMAQTDATIQSNQASMRAVELQM
            C    WR+HPNF+WG QG +    Q   +   QP +V   QQ +P   QQ  Q T      N+ S+LE MMKEYMA+TDA IQS  ASMR    Q+
Subjt:  AAKSCVYYGWRNHPNFAWGWQGSNLQALQAHQKVANQPRFVMQNQQGLP---QQNKQATH----PNSESSLEAMMKEYMAQTDATIQSNQASMRAVELQM

Query:  GQLANELKAQPHGKIPLDTEHPRREDRK
        G LANELK +P G  P  TE PRRE ++
Subjt:  GQLANELKAQPHGKIPLDTEHPRREDRK

A0A6J1DWK1 uncharacterized protein LOC1110250531.5e-1837.04Show/hide
Query:  MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRGSRAIRA-------DVTTLANTLKGITVVSNVQQPPVVEPAAVVNQVAAKSCVYYGWRNHPNFA
        ++DAS  GALL K + +   ILERIS+ +  WS+ R      +         TTL + ++ +T ++N                +  +      RNHPNF 
Subjt:  MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRGSRAIRA-------DVTTLANTLKGITVVSNVQQPPVVEPAAVVNQVAAKSCVYYGWRNHPNFA

Query:  W-GWQG------SNLQALQAHQKVANQPRFVMQNQQGLPQQNKQATHPNSESSLEAMMKEYMAQTDATIQSNQASMRAVELQMGQLANELKAQPHGKIPL
        W G QG      SN    Q  QKV+  P F  Q Q     Q+K      S +SLE +MK+YMA  DAT+QS  AS+R +ELQ+GQLA +LK++P G +P 
Subjt:  W-GWQG------SNLQALQAHQKVANQPRFVMQNQQGLPQQNKQATHPNSESSLEAMMKEYMAQTDATIQSNQASMRAVELQMGQLANELKAQPHGKIPL

Query:  DTEHPRREDRKPSNLL
        DTE P+R+ ++  N L
Subjt:  DTEHPRREDRKPSNLL

A0A6J1EEI2 uncharacterized protein LOC1114333943.0e-1934.21Show/hide
Query:  MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRGS--------------RAIRADVTTLANTLKGITVVSNVQQPPVVEPAAVVNQVAAKSCVYY--
        +VDAS  GA+L+KT+NE YEILERI++ +CQW++VR +               +I A + ++ N L+ + +  +      V   AV+NQ AA+SCVY   
Subjt:  MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRGS--------------RAIRADVTTLANTLKGITVVSNVQQPPVVEPAAVVNQVAAKSCVYY--

Query:  -------------------------------------GWRNHPNFAWGWQGSNLQALQAHQKVANQPRFVMQNQQGLPQQ--NKQATH-PNSE----SSL
                                             GWRNHPNF+W  QGS  Q  Q   K    P F +QNQ     Q  N Q    P ++    +S+
Subjt:  -------------------------------------GWRNHPNFAWGWQGSNLQALQAHQKVANQPRFVMQNQQGLPQQ--NKQATH-PNSE----SSL

Query:  EAMMKEYMAQTDATIQSNQASMRAVELQ
        E+++KEYMA+ D  IQ+ QAS+R +E+Q
Subjt:  EAMMKEYMAQTDATIQSNQASMRAVELQ

A0A6J1EQ90 uncharacterized protein LOC1114364117.5e-2333.46Show/hide
Query:  MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRGS--------------RAIRADVTTLANTLKGITVVSNVQQPPVVEPAAVVNQVAAKSCVYY--
        +VDAS  GA+L+KT+NE YEILERI++ +CQW++VR +               +I A + ++ N L+ + +  +      V  AA +NQ AA+SCVY   
Subjt:  MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRGS--------------RAIRADVTTLANTLKGITVVSNVQQPPVVEPAAVVNQVAAKSCVYY--

Query:  -------------------------------------GWRNHPNFAWGWQGSNLQALQAHQKVANQPRFVMQNQ-----QGLPQQNKQATHP--NSESSL
                                             GWRNHPNF+  W+G +L   Q   K      F +QNQ     Q +  Q K  T     SE+S+
Subjt:  -------------------------------------GWRNHPNFAWGWQGSNLQALQAHQKVANQPRFVMQNQ-----QGLPQQNKQATHP--NSESSL

Query:  EAMMKEYMAQTDATIQSNQASMRAVELQMGQLANELKAQPHGKIPLDTEHPRRE
        E+++KEYMA+ DA IQS QAS+R +E+Q+G   N  +   H +   DT+    E
Subjt:  EAMMKEYMAQTDATIQSNQASMRAVELQMGQLANELKAQPHGKIPLDTEHPRRE

A0A6J1G7Q6 uncharacterized protein LOC1114515982.8e-2535.94Show/hide
Query:  MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRGS--------------RAIRADVTTLANTLKGITVVSNVQQPPVVEPAAVVNQVAAKSCVYY--
        +VDAS  G +L+KT+NE YEILERI++ +CQW +VR +               +I A + ++ N L+ +              A V+ Q A +SCVY   
Subjt:  MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRGS--------------RAIRADVTTLANTLKGITVVSNVQQPPVVEPAAVVNQVAAKSCVYY--

Query:  -------------------------------------GWRNHPNFAWGWQGSNLQALQAHQKVANQPRFVMQNQQGLPQQNKQATHPNSESS--------
                                             GWRNHPNF    QGS  Q  Q   K    P F +QNQ  L   ++QAT     +S        
Subjt:  -------------------------------------GWRNHPNFAWGWQGSNLQALQAHQKVANQPRFVMQNQQGLPQQNKQATHPNSESS--------

Query:  -LEAMMKEYMAQTDATIQSNQASMRAVELQMGQLANELKAQPHGKIPLDTEHPRRE
         LE+++KEYMA+ DA IQS Q S+R +E+Q+GQLANEL+ +P GK+P DTE P+RE
Subjt:  -LEAMMKEYMAQTDATIQSNQASMRAVELQMGQLANELKAQPHGKIPLDTEHPRRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGACGCTTCTGTGGGAGGGGCTCTTTTGGCAAAAACTTTTAATGAAGTTTATGAGATTTTAGAGAGAATATCAACCTACAGTTGTCAGTGGTCAAATGTTAGAGG
CTCTAGGGCCATTAGGGCTGATGTTACAACATTAGCTAACACTCTTAAAGGCATAACTGTGGTAAGCAATGTTCAGCAGCCACCAGTGGTGGAGCCTGCTGCAGTTGTAA
ACCAAGTGGCAGCCAAATCTTGTGTCTATTATGGTTGGCGCAACCACCCCAACTTTGCATGGGGATGGCAGGGAAGTAATTTGCAAGCCCTCCAAGCACATCAAAAGGTG
GCGAATCAGCCAAGATTTGTTATGCAGAATCAACAGGGGTTGCCCCAGCAAAATAAGCAAGCTACCCATCCAAATTCAGAGAGTTCTCTTGAAGCAATGATGAAAGAATA
TATGGCTCAAACAGATGCCACAATTCAAAGTAATCAAGCTTCAATGAGAGCCGTGGAATTGCAAATGGGTCAGCTAGCTAATGAGCTGAAGGCACAACCTCACGGGAAGA
TTCCTTTGGATACTGAACACCCTAGAAGAGAAGATCGAAAACCCAGCAACCTTCTTGTGCGAACACCACCAATTGGTTACACCAGTATATCTCTAAGACTTCTTGAAGCA
GGAGACTGGTGGGAATCTTTCAGGAGAGATCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGACGCTTCTGTGGGAGGGGCTCTTTTGGCAAAAACTTTTAATGAAGTTTATGAGATTTTAGAGAGAATATCAACCTACAGTTGTCAGTGGTCAAATGTTAGAGG
CTCTAGGGCCATTAGGGCTGATGTTACAACATTAGCTAACACTCTTAAAGGCATAACTGTGGTAAGCAATGTTCAGCAGCCACCAGTGGTGGAGCCTGCTGCAGTTGTAA
ACCAAGTGGCAGCCAAATCTTGTGTCTATTATGGTTGGCGCAACCACCCCAACTTTGCATGGGGATGGCAGGGAAGTAATTTGCAAGCCCTCCAAGCACATCAAAAGGTG
GCGAATCAGCCAAGATTTGTTATGCAGAATCAACAGGGGTTGCCCCAGCAAAATAAGCAAGCTACCCATCCAAATTCAGAGAGTTCTCTTGAAGCAATGATGAAAGAATA
TATGGCTCAAACAGATGCCACAATTCAAAGTAATCAAGCTTCAATGAGAGCCGTGGAATTGCAAATGGGTCAGCTAGCTAATGAGCTGAAGGCACAACCTCACGGGAAGA
TTCCTTTGGATACTGAACACCCTAGAAGAGAAGATCGAAAACCCAGCAACCTTCTTGTGCGAACACCACCAATTGGTTACACCAGTATATCTCTAAGACTTCTTGAAGCA
GGAGACTGGTGGGAATCTTTCAGGAGAGATCTCTGA
Protein sequenceShow/hide protein sequence
MVDASVGGALLAKTFNEVYEILERISTYSCQWSNVRGSRAIRADVTTLANTLKGITVVSNVQQPPVVEPAAVVNQVAAKSCVYYGWRNHPNFAWGWQGSNLQALQAHQKV
ANQPRFVMQNQQGLPQQNKQATHPNSESSLEAMMKEYMAQTDATIQSNQASMRAVELQMGQLANELKAQPHGKIPLDTEHPRREDRKPSNLLVRTPPIGYTSISLRLLEA
GDWWESFRRDL