CuGenDBv2

Gene ID	Lag0026546
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Pyridoxal 5'-phosphate synthase
Genome location	chr10:38869176..38870430
RNA-Seq Expression	Lag0026546
Synteny	Lag0026546
Gene Ontology terms	GO:0008615 - pyridoxine biosynthetic process (biological process) GO:0042823 - pyridoxal phosphate biosynthetic process (biological process) GO:0004733 - pyridoxamine-phosphate oxidase activity (molecular function) GO:0010181 - FMN binding (molecular function)
InterPro domains	IPR000659 - Pyridoxamine 5'-phosphate oxidase IPR012349 - FMN-binding split barrel IPR024624 - Pyridoxamine 5'-phosphate oxidase, Alr4036 family, FMN-binding domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0048877.1 pyridoxine/pyridoxamine 5'-phosphate oxidase 2 [Cucumis melo var. makuwa]

5.6e-26

82.05

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Query:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV
        MGSA APWKSLLL ALESN QIKHSKFLQLATIGTNGRPSNRTVVFR FE+ TD+I I+T+S SRKIEELKN PF E+
Subjt:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV

XP_008437871.1 PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 2 [Cucumis melo]

4.3e-26

83.33

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Query:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV
        MGSA APWKSLLL ALESN QIKHSKFLQLATIGTNGRPSNRTVVFR FE+ TD+I I+T+S SRKIEELKN PF EV
Subjt:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV

XP_038874699.1 pyridoxine/pyridoxamine 5'-phosphate oxidase 2-like isoform X2 [Benincasa hispida]

8.7e-27

82.05

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Query:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV
        MGSAAAPWKSLLLGALESN +IKHSKFLQLATIG NGRPSNRTVVFRGFE+ TD+I I+T+S +RKIEELKN PF E+
Subjt:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV

XP_038899249.1 pyridoxine/pyridoxamine 5'-phosphate oxidase 2 isoform X1 [Benincasa hispida]

3.9e-27

83.33

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Query:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV
        MGSAAAPWKSLLLGALESN +IKHSKFLQLATIG NGRPSNRTVVFRGFE+ TDKI I+T+S +RKIEELKN PF E+
Subjt:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV

XP_038899256.1 pyridoxine/pyridoxamine 5'-phosphate oxidase 2 isoform X2 [Benincasa hispida]

8.7e-27

84.42

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Query:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDE
        MGSAAAPWKSLLLGALESN +IKHSKFLQLATIG NGRPSNRTVVFRGFE+ TDKI I+T+S +RKIEELKN PF E
Subjt:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L745 Pyridoxal 5'-phosphate synthase

4.6e-26

79.49

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Query:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV
        MGSA APWKSLLL ALESN   KHSKFLQLATIGTNGRPSNRTVVFRGFE+ TD+I I+T+S +RKIEELKN PF E+
Subjt:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV

A0A1S4DSQ7 Pyridoxal 5'-phosphate synthase

2.1e-26

83.33

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Query:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV
        MGSA APWKSLLL ALESN QIKHSKFLQLATIGTNGRPSNRTVVFR FE+ TD+I I+T+S SRKIEELKN PF EV
Subjt:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV

A0A5A7U3K2 Pyridoxal 5'-phosphate synthase

2.7e-26

82.05

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Query:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV
        MGSA APWKSLLL ALESN QIKHSKFLQLATIGTNGRPSNRTVVFR FE+ TD+I I+T+S SRKIEELKN PF E+
Subjt:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV

A0A5D3DBA0 Pyridoxal 5'-phosphate synthase

2.1e-26

83.33

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Query:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV
        MGSA APWKSLLL ALESN QIKHSKFLQLATIGTNGRPSNRTVVFR FE+ TD+I I+T+S SRKIEELKN PF EV
Subjt:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV

A0A6J1EFU0 Pyridoxal 5'-phosphate synthase

7.9e-26

80.77

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Query:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV
        MGSAAAPWKSLLL ALESNAQIKHS FL LATIG NGRPSNRTVVFRGFE+ TD+I I+T+S SRKIEELK  PF E+
Subjt:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV

SwissProt top hits

e value

%identity

Alignment

Q9ZPY1 Pyridoxine/pyridoxamine 5'-phosphate oxidase 2

7.1e-24

65.38

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Query:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV
        MG+  APWK LL GA+E+N+ + HS ++QLATIG NGRPSNRTVVFRGFE+++D+IQI+T+  SRKIEELK+ PF E+
Subjt:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV

Arabidopsis top hits

e value

%identity

Alignment

AT2G46580.1 Pyridoxamine 5'-phosphate oxidase family protein

5.1e-25

65.38

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Query:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV
        MG+  APWK LL GA+E+N+ + HS ++QLATIG NGRPSNRTVVFRGFE+++D+IQI+T+  SRKIEELK+ PF E+
Subjt:  MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEV

Sequences

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CDS sequence

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ATGGGGTCAGCAGCAGCGCCATGGAAATCCCTTCTTCTCGGCGCTTTGGAATCTAATGCTCAAATCAAGCATTCCAAATTCTTGCAGCTCGCAACGATCGGAACAAATGG
AAGGCCCTCAAATCGCACAGTTGTTTTCAGAGGATTTGAAGACGACACTGATAAGATCCAAATTCACACGAATTCTGGAAGTCGCAAGATTGAAGAGCTTAAGAATAGTC
CATTTGATGAGGTAAAGTTAAAGTTACTGTATTTGGTTGTTAGGACAGATGATATTGACCTGGGTAAAGCCCAAAATTTTGGGCTTCTCTTTCGAAAACAACCGTCAGCA
AAGCTTCTTCATGATTTCATTTGGGCATTTTCCTTCCCTCCATCTTTGGCACCGTCGGCGTTGTCAGCCATTTTCGCCACCGCCATCACCGGTCGTCTTCGCTGCTGTCG
CTAG

mRNA sequence

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Protein sequence

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MGSAAAPWKSLLLGALESNAQIKHSKFLQLATIGTNGRPSNRTVVFRGFEDDTDKIQIHTNSGSRKIEELKNSPFDEVKLKLLYLVVRTDDIDLGKAQNFGLLFRKQPSA
KLLHDFIWAFSFPPSLAPSALSAIFATAITGRLRCCR

Lag0026546 (gene) of Sponge gourd (AG-4) v1 genome