CuGenDBv2

Gene ID	Lag0026551
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	DNA-binding protein SMUBP-2
Genome location	chr10:38932277..38933077
RNA-Seq Expression	Lag0026551
Synteny	Lag0026551
Gene Ontology terms	GO:0032508 - DNA duplex unwinding (biological process) GO:0005681 - spliceosomal complex (cellular component) GO:0003677 - DNA binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0043139 - 5'-3' DNA helicase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6580828.1 1-acyl-sn-glycerol-3-phosphate acyltransferase 2, partial [Cucurbita argyrosperma subsp. sororia]

9.2e-38

85.85

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Query:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH
        MEGSKTKKKSAPITLEQFVSITAPLLD+EKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNK DVLPPHK         +TH
Subjt:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH

Query:  GTLVLK
          +VLK
Subjt:  GTLVLK

KAG7017583.1 DNA-binding protein SMUBP-2 [Cucurbita argyrosperma subsp. argyrosperma]

9.2e-38

85.85

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Query:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH
        MEGSKTKKKSAPITLEQFVSITAPLLD+EKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNK DVLPPHK         +TH
Subjt:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH

Query:  GTLVLK
          +VLK
Subjt:  GTLVLK

XP_004136591.1 DNA-binding protein SMUBP-2 isoform X2 [Cucumis sativus]

1.6e-37

84.91

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Query:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH
        MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEI+ASISSGA+RNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNK DVLPPHK         +TH
Subjt:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH

Query:  GTLVLK
          +VLK
Subjt:  GTLVLK

XP_022982878.1 DNA-binding protein SMUBP-2 [Cucurbita maxima]

9.2e-38

85.85

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Query:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH
        MEGSKTKKKSAPITLEQFVSITAPLLD+EKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNK DVLPPHK         +TH
Subjt:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH

Query:  GTLVLK
          +VLK
Subjt:  GTLVLK

XP_031739172.1 DNA-binding protein SMUBP-2 isoform X1 [Cucumis sativus]

1.6e-37

84.91

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Query:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH
        MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEI+ASISSGA+RNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNK DVLPPHK         +TH
Subjt:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH

Query:  GTLVLK
          +VLK
Subjt:  GTLVLK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LEK1 Uncharacterized protein

7.6e-38

84.91

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Query:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH
        MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEI+ASISSGA+RNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNK DVLPPHK         +TH
Subjt:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH

Query:  GTLVLK
          +VLK
Subjt:  GTLVLK

A0A1S3B6U6 LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2

6.4e-37

83.96

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Query:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH
        MEGSKTKKKSA ITLEQFVSITAPLLDMEKDAEI+ASISSGA+RNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNK DVLPPHK         +TH
Subjt:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH

Query:  GTLVLK
          +VLK
Subjt:  GTLVLK

A0A5D3DQ25 DNA-binding protein SMUBP-2

6.4e-37

83.96

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Query:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH
        MEGSKTKKKSA ITLEQFVSITAPLLDMEKDAEI+ASISSGA+RNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNK DVLPPHK         +TH
Subjt:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH

Query:  GTLVLK
          +VLK
Subjt:  GTLVLK

A0A6J1FAE5 DNA-binding protein SMUBP-2

1.7e-37

83.96

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Query:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH
        MEG+KTKKKSAPITLEQFVSITAPL+D+EKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNK DVLPPHK         +TH
Subjt:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH

Query:  GTLVLK
          +VLK
Subjt:  GTLVLK

A0A6J1J668 DNA-binding protein SMUBP-2

4.5e-38

85.85

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Query:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH
        MEGSKTKKKSAPITLEQFVSITAPLLD+EKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNK DVLPPHK         +TH
Subjt:  MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTH

Query:  GTLVLK
          +VLK
Subjt:  GTLVLK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G03270.1 DNA-binding protein, putative

2.7e-27

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Query:  ITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTHGTLVLKIIESPL
        ++LE FVS  APL+DMEK+AEIS S++SGASRN+ETAQKKG+TILNLKC+D  +GLMGK+L+EFQSNK DVLP HK  +        H  +VLK+ +S L
Subjt:  ITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTHGTLVLKIIESPL

Sequences

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CDS sequence

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ATGGAGGGAAGCAAAACCAAGAAGAAATCAGCTCCTATCACTCTGGAGCAATTCGTTTCCATCACGGCACCACTTTTAGACATGGAGAAGGATGCAGAAATATCTGCGTC
TATCAGCTCAGGTGCATCCAGGAACTTGGAGACTGCCCAGAAAAAGGGTTCTACCATTCTCAACTTGAAGTGTATAGATGCTTCGAGTGGACTCATGGGAAAGACGCTTC
TTGAGTTTCAATCAAACAAGGCAGACGTTCTTCCTCCGCACAAGGTGAGAAGTAGTAGACAGTTTCCTCCAACTACTCATGGAACTCTAGTTTTGAAAATTATTGAATCA
CCACTAAGTCCTGTAAAGACAACCGACTACCTACAAGCTGCTTAA

mRNA sequence

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Protein sequence

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MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEISASISSGASRNLETAQKKGSTILNLKCIDASSGLMGKTLLEFQSNKADVLPPHKVRSSRQFPPTTHGTLVLKIIES
PLSPVKTTDYLQAA

Lag0026551 (gene) of Sponge gourd (AG-4) v1 genome