; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026576 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026576
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCUGBP Elav-like family member 1
Genome locationchr10:39208834..39217328
RNA-Seq ExpressionLag0026576
SyntenyLag0026576
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EDO44381.1 predicted protein, partial [Nematostella vectensis]2.5e-0733.33Show/hide
Query:  FKCLTLLEDQTLFKTSTLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTSTLLEDQILFRTSTLLESQTLFKTSTLLEDQKLFKTSTFLEDQTLFKTS
        +K  +L E   L+K+S+L +  +L+K+S+L +   L+K+S+L +   P+K+S+L +   L+R+S L +S  L+K+S+L +   L+K+S+  +   L+K+S
Subjt:  FKCLTLLEDQTLFKTSTLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTSTLLEDQILFRTSTLLESQTLFKTSTLLEDQKLFKTSTFLEDQTLFKTS

Query:  TLIEDQRLFRTSTL
        +L +   L+++S L
Subjt:  TLIEDQRLFRTSTL

TWW67029.1 CUGBP Elav-like family member 1 [Takifugu flavidus]5.5e-1037.42Show/hide
Query:  TLTKTRVQSFKALKQNQRIQRDSTKSEDRRL-----------STIHKFKCLTLLEDQTLFKTSTLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTST
        TL +T VQ+ + L Q Q + +  T  + + L            T+   + LTL++ QTL +T TL++ QTL +T TL++ Q L +T TL++ QT  +T T
Subjt:  TLTKTRVQSFKALKQNQRIQRDSTKSEDRRL-----------STIHKFKCLTLLEDQTLFKTSTLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTST

Query:  LLEDQILFRTSTLLESQTLFKTSTLLEDQKLFKTSTFLEDQTLFKTSTLIEDQRLFRTSTLLE
        L+  Q L +T TL+++ TL +T TL++ Q L +T T ++ QTL +T TL++ Q L +T TL++
Subjt:  LLEDQILFRTSTLLESQTLFKTSTLLEDQKLFKTSTFLEDQTLFKTSTLIEDQRLFRTSTLLE

WP_060599517.1 SH3 domain-containing protein [Paraburkholderia caribensis]6.5e-1133.88Show/hide
Query:  TIHKFKCLTLLEDQTLFKTSTLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTSTLLEDQILFRTSTLLESQTLFKTSTLLEDQKLFKTSTFLEDQTL
        ++H  K +  +E+  + KT+ +LED  + KT+ +LED  + KT+ +LED    K+  +LED  + +T+ +LE   + KT+ +LED  + KT+  LED  +
Subjt:  TIHKFKCLTLLEDQTLFKTSTLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTSTLLEDQILFRTSTLLESQTLFKTSTLLEDQKLFKTSTFLEDQTL

Query:  FKTSTLIEDQRLFRTSTLLED
         K+  ++ED  + +T+ +L D
Subjt:  FKTSTLIEDQRLFRTSTLLED

XP_029607989.1 proteoglycan 4-like [Salmo trutta]8.4e-1145.9Show/hide
Query:  LSTIHKFKCLTLLEDQTLFKTSTLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTSTLLEDQILFRTSTLLESQTLFKTSTLLEDQKLFKTSTFLEDQ
        L T    K    L+ QTL KT TLL+ QT  KT TLL+ Q   KT TLL  Q P KT TLL+ Q+  +T TLL++QTL KT T L+ Q    T   L+ Q
Subjt:  LSTIHKFKCLTLLEDQTLFKTSTLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTSTLLEDQILFRTSTLLESQTLFKTSTLLEDQKLFKTSTFLEDQ

Query:  TLFKTSTLIEDQRLFRTSTLLE
        T  KT T ++ Q   +T T L+
Subjt:  TLFKTSTLIEDQRLFRTSTLLE

XP_038137370.1 uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02-like, partial [Cyprinodon tularosa]9.7e-0746.61Show/hide
Query:  TLLEDQTLFKTSTLLEDQTLFK----TSTLLEDQRLFKTSTLLEDQTPFKTSTLLEDQILFRTSTLLESQTLFKTSTLLEDQKLFKTSTFLED--QTLFK
        TLL+  TL +TSTLL+  TL +    TSTLL+   L +TSTLL+  TP  T T    Q    TSTLL++ T   TSTLL+   L +TST      QT   
Subjt:  TLLEDQTLFKTSTLLEDQTLFK----TSTLLEDQRLFKTSTLLEDQTPFKTSTLLEDQILFRTSTLLESQTLFKTSTLLEDQKLFKTSTFLED--QTLFK

Query:  TSTLIEDQRLFRTSTLLE
        TSTL++   L +TSTLL+
Subjt:  TSTLIEDQRLFRTSTLLE

TrEMBL top hitse value%identityAlignment
A0A2I4D8V5 protein CASC1-like4.7e-0726.97Show/hide
Query:  LTKTRVQSFKALKQNQRIQRDSTKSEDRRLSTIHKFKCLTLLEDQTLFKTSTLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTSTLLEDQILFRTST
        L  + V    ++ ++  + +DS+  +D  L      K  ++L+D ++ K S++L+D ++ K S +L+D  + K S++L+D +  K S++L+D  + + S+
Subjt:  LTKTRVQSFKALKQNQRIQRDSTKSEDRRLSTIHKFKCLTLLEDQTLFKTSTLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTSTLLEDQILFRTST

Query:  LLESQTLFKTSTLLEDQKLFKTSTFLEDQTLFKTSTLIEDQRLFRTSTLLED
        +L+  ++ K S++L+D  + K S+ L+D ++ K S++++D  + + S++L+D
Subjt:  LLESQTLFKTSTLLEDQKLFKTSTFLEDQTLFKTSTLIEDQRLFRTSTLLED

A0A5C6NK67 CUGBP Elav-like family member 12.6e-1037.42Show/hide
Query:  TLTKTRVQSFKALKQNQRIQRDSTKSEDRRL-----------STIHKFKCLTLLEDQTLFKTSTLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTST
        TL +T VQ+ + L Q Q + +  T  + + L            T+   + LTL++ QTL +T TL++ QTL +T TL++ Q L +T TL++ QT  +T T
Subjt:  TLTKTRVQSFKALKQNQRIQRDSTKSEDRRL-----------STIHKFKCLTLLEDQTLFKTSTLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTST

Query:  LLEDQILFRTSTLLESQTLFKTSTLLEDQKLFKTSTFLEDQTLFKTSTLIEDQRLFRTSTLLE
        L+  Q L +T TL+++ TL +T TL++ Q L +T T ++ QTL +T TL++ Q L +T TL++
Subjt:  LLEDQILFRTSTLLESQTLFKTSTLLEDQKLFKTSTFLEDQTLFKTSTLIEDQRLFRTSTLLE

A0A6H5HKK0 Uncharacterized protein (Fragment)1.2e-0532.35Show/hide
Query:  FKTSTLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTSTLLEDQILFRTSTLLESQTLFKTSTLLEDQKLFKTSTFLEDQTLFKTSTLIEDQRLFRTS
        F++ +L + Q+LFK+ +L + Q LF++ +L + Q+ F++ +L + Q LF+T +L ++Q+LF+T +L + Q LF++ +       F++ +L + Q LF++ 
Subjt:  FKTSTLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTSTLLEDQILFRTSTLLESQTLFKTSTLLEDQKLFKTSTFLEDQTLFKTSTLIEDQRLFRTS

Query:  TL
        T+
Subjt:  TL

A0A7J5XVB6 Uncharacterized protein6.7e-0632.86Show/hide
Query:  KQNQRIQRDSTKSEDRRLSTIHKFKCLTLLEDQTLFKTSTLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTSTLLEDQILFRTSTLLESQTLFKTST
        K+   ++ ++ + E   +    + K  T +EDQT  K +T +ED+T  K +T +ED+   K +T +ED+T  K +T +ED+   + +T +E +T  K +T
Subjt:  KQNQRIQRDSTKSEDRRLSTIHKFKCLTLLEDQTLFKTSTLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTSTLLEDQILFRTSTLLESQTLFKTST

Query:  LLEDQKLFKTSTFLEDQTLFKTSTLIEDQRLFRTSTLLED
         +ED+   K +T +ED+T  K +T +EDQ   + +T +ED
Subjt:  LLEDQKLFKTSTFLEDQTLFKTSTLIEDQRLFRTSTLLED

A7RW30 Predicted protein (Fragment)1.2e-0733.33Show/hide
Query:  FKCLTLLEDQTLFKTSTLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTSTLLEDQILFRTSTLLESQTLFKTSTLLEDQKLFKTSTFLEDQTLFKTS
        +K  +L E   L+K+S+L +  +L+K+S+L +   L+K+S+L +   P+K+S+L +   L+R+S L +S  L+K+S+L +   L+K+S+  +   L+K+S
Subjt:  FKCLTLLEDQTLFKTSTLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTSTLLEDQILFRTSTLLESQTLFKTSTLLEDQKLFKTSTFLEDQTLFKTS

Query:  TLIEDQRLFRTSTL
        +L +   L+++S L
Subjt:  TLIEDQRLFRTSTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGTTGGATCGTTCCTCTAGAGTTTTCTAGCTCAACTTTCGTTTCAAGTCTTGCACTCCTCTCTTCCTCAACCATTGATTCCACCTGGATAATCTTTGCTTCTGA
TTGCTCAAGTTTTGCCTTCAAGGATAGTTTTGATCATAAACCCCCCCTTCTGCGTTTTGCTTCGCCAGCCAGCACCCCGAAACGCGTCGCCGCCGTCCCTGCTCGAGCGC
CGCCCTCCCCCTCGTGCGCGATCTTCCTTCCCCACGCCGTCTTCGTGGGTTTTTTCGTCGAGAAGTGGAAAAATACTCGTGTGGGGTTTAGACTCCGTTTTGGATCGTTA
TGGCGTCGCTTAGCGATTTCGGTGAGTTTATGCGCTTACCCATTCTTGCGCCGTCTAAGTGATCGATTGGGTTCGAATCACTATAAGCTCGAATACCCACTACCCAAGGA
TCGTTCTAGTGCGTTGTTCGAGCGCCGTAAAAGTGTTCGATTGAGTTCGAATCACTTAAAACTTGAATACCCATTGTCCAAGGAGTATTCTAACACGTTGTTCGAGGTTA
GTATAACCCGTCTAGCGTGGAGCTTGTCTGAATCTCTTGAGCGGTTCAAGGAGTTCTTAGGAGCGCTCGTAAGCTTTTCGGTAAGTAGGTTCTATCCGTTGAGTCTGTTT
GACTGCATGAGCATGCTTGCTGTTTATCGCTTTTCTACGCGTTGTCTTATTGCTTTTGAGCTATACTGCATGATAGTCAAGTTGCATGGTCTTGTGTGCTCATTGAGAGG
TGAGTTTGCATATGATGAGCTCGGTGGTGCTGAGGAGGCGAGACCTTACTCGCTATATTTGTGGAGTTTTGGGCTTGATGAGTTGCCTTGGAGCTGTGACGCTGTGTACG
AGAAAAGACGAGGGCTACGGAGTGGAACGACAGCGGAAGCACGAGCAAAACAACGGCGGTGGTGCGAGATAAACGACGACGGCGACGGAGGAGAACCGGCGGTGCGGGAG
ATTTGGGATAAGGCTGGGTACCTTATCCTGGTAACACTATGTGATACGGCCCGCTTTGTATTCGATACAGACGTATTGATCCAAGGCGTCCATGTAGGAGACATGCGAGC
GGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCACGAAATAGGGTTCAGAAATTCTACACTCTCACAAAGACAAGAGTTCAGAGTTTCAAAGCTCTCAAGCAGA
ACCAAAGAATTCAGAGAGACTCCACCAAGTCTGAAGACCGAAGACTCTCTACAATCCATAAGTTCAAGTGTTTAACACTTCTTGAAGACCAAACACTCTTCAAGACTTCA
ACACTCCTTGAAGACCAAACACTCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAAGACTTCAACACTCCTTGAAGACCAAACACCCTTCAAGACTTCAAC
ACTCCTTGAAGATCAAATACTCTTCAGGACATCAACACTTCTTGAAAGCCAAACGCTCTTCAAGACCTCAACACTCCTTGAAGATCAAAAACTCTTCAAGACATCAACAT
TTCTTGAAGACCAAACACTCTTCAAGACTTCAACACTCATTGAAGATCAAAGACTCTTCAGGACATCAACACTTCTTGAAGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTGTTGGATCGTTCCTCTAGAGTTTTCTAGCTCAACTTTCGTTTCAAGTCTTGCACTCCTCTCTTCCTCAACCATTGATTCCACCTGGATAATCTTTGCTTCTGA
TTGCTCAAGTTTTGCCTTCAAGGATAGTTTTGATCATAAACCCCCCCTTCTGCGTTTTGCTTCGCCAGCCAGCACCCCGAAACGCGTCGCCGCCGTCCCTGCTCGAGCGC
CGCCCTCCCCCTCGTGCGCGATCTTCCTTCCCCACGCCGTCTTCGTGGGTTTTTTCGTCGAGAAGTGGAAAAATACTCGTGTGGGGTTTAGACTCCGTTTTGGATCGTTA
TGGCGTCGCTTAGCGATTTCGGTGAGTTTATGCGCTTACCCATTCTTGCGCCGTCTAAGTGATCGATTGGGTTCGAATCACTATAAGCTCGAATACCCACTACCCAAGGA
TCGTTCTAGTGCGTTGTTCGAGCGCCGTAAAAGTGTTCGATTGAGTTCGAATCACTTAAAACTTGAATACCCATTGTCCAAGGAGTATTCTAACACGTTGTTCGAGGTTA
GTATAACCCGTCTAGCGTGGAGCTTGTCTGAATCTCTTGAGCGGTTCAAGGAGTTCTTAGGAGCGCTCGTAAGCTTTTCGGTAAGTAGGTTCTATCCGTTGAGTCTGTTT
GACTGCATGAGCATGCTTGCTGTTTATCGCTTTTCTACGCGTTGTCTTATTGCTTTTGAGCTATACTGCATGATAGTCAAGTTGCATGGTCTTGTGTGCTCATTGAGAGG
TGAGTTTGCATATGATGAGCTCGGTGGTGCTGAGGAGGCGAGACCTTACTCGCTATATTTGTGGAGTTTTGGGCTTGATGAGTTGCCTTGGAGCTGTGACGCTGTGTACG
AGAAAAGACGAGGGCTACGGAGTGGAACGACAGCGGAAGCACGAGCAAAACAACGGCGGTGGTGCGAGATAAACGACGACGGCGACGGAGGAGAACCGGCGGTGCGGGAG
ATTTGGGATAAGGCTGGGTACCTTATCCTGGTAACACTATGTGATACGGCCCGCTTTGTATTCGATACAGACGTATTGATCCAAGGCGTCCATGTAGGAGACATGCGAGC
GGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCACGAAATAGGGTTCAGAAATTCTACACTCTCACAAAGACAAGAGTTCAGAGTTTCAAAGCTCTCAAGCAGA
ACCAAAGAATTCAGAGAGACTCCACCAAGTCTGAAGACCGAAGACTCTCTACAATCCATAAGTTCAAGTGTTTAACACTTCTTGAAGACCAAACACTCTTCAAGACTTCA
ACACTCCTTGAAGACCAAACACTCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAAGACTTCAACACTCCTTGAAGACCAAACACCCTTCAAGACTTCAAC
ACTCCTTGAAGATCAAATACTCTTCAGGACATCAACACTTCTTGAAAGCCAAACGCTCTTCAAGACCTCAACACTCCTTGAAGATCAAAAACTCTTCAAGACATCAACAT
TTCTTGAAGACCAAACACTCTTCAAGACTTCAACACTCATTGAAGATCAAAGACTCTTCAGGACATCAACACTTCTTGAAGACTGA
Protein sequenceShow/hide protein sequence
MNCWIVPLEFSSSTFVSSLALLSSSTIDSTWIIFASDCSSFAFKDSFDHKPPLLRFASPASTPKRVAAVPARAPPSPSCAIFLPHAVFVGFFVEKWKNTRVGFRLRFGSL
WRRLAISVSLCAYPFLRRLSDRLGSNHYKLEYPLPKDRSSALFERRKSVRLSSNHLKLEYPLSKEYSNTLFEVSITRLAWSLSESLERFKEFLGALVSFSVSRFYPLSLF
DCMSMLAVYRFSTRCLIAFELYCMIVKLHGLVCSLRGEFAYDELGGAEEARPYSLYLWSFGLDELPWSCDAVYEKRRGLRSGTTAEARAKQRRWCEINDDGDGGEPAVRE
IWDKAGYLILVTLCDTARFVFDTDVLIQGVHVGDMRAGVSYAMSLHKTGPRNRVQKFYTLTKTRVQSFKALKQNQRIQRDSTKSEDRRLSTIHKFKCLTLLEDQTLFKTS
TLLEDQTLFKTSTLLEDQRLFKTSTLLEDQTPFKTSTLLEDQILFRTSTLLESQTLFKTSTLLEDQKLFKTSTFLEDQTLFKTSTLIEDQRLFRTSTLLED