; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026582 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026582
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSingle-stranded DNA-binding protein, mitochondrial
Genome locationchr10:39306555..39309954
RNA-Seq ExpressionLag0026582
SyntenyLag0026582
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF6734224.1 hypothetical protein FQA47_013229 [Oryzias melastigma]1.4e-0833.86Show/hide
Query:  QQADHPRDQQANRPIK--KINKSAGRSSKRSTSQLTDQ-EDQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQE---DQQVNRPIIQEINKP----
        QQ D P +QQ NRP K  + NK   R + R T+Q TD+  +QQ  +P  ++ NK TD   + T++ + + T++PT+Q+   +QQ N+P  ++ N+P    
Subjt:  QQADHPRDQQANRPIK--KINKSAGRSSKRSTSQLTDQ-EDQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQE---DQQVNRPIIQEINKP----

Query:  ---TDRSRRSTSQQADHPRDQQANRPIKKINKSAGRSSKRSTSQLTDQEDQQVSRPIIQEIN---KPTDR-SRRSTSQQADHPRDQQAN
           T+R ++ T++Q + P +QQ +RP    N+   + +K +  Q   ++++Q ++P  ++ N   KPT+R + R T+QQ D P +QQ N
Subjt:  ---TDRSRRSTSQQADHPRDQQANRPIKKINKSAGRSSKRSTSQLTDQEDQQVSRPIIQEIN---KPTDR-SRRSTSQQADHPRDQQAN

KOX68120.1 Single-stranded DNA-binding protein, mitochondrial, partial [Melipona quadrifasciata]2.6e-1035.98Show/hide
Query:  QQADHPRDQQANRPIKKINKSAGRSSKRSTSQLTDQE-----DQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQE-----DQQVNRPIIQEINKP
        QQ   P DQQ +RP    ++   R + + TS+  DQ+     DQQ SRP  Q+ ++P D   + TSR + + TS+P DQ+     DQQ +RP  Q+ ++P
Subjt:  QQADHPRDQQANRPIKKINKSAGRSSKRSTSQLTDQE-----DQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQE-----DQQVNRPIIQEINKP

Query:  TD-RSRRSTSQQADHPRDQQANRPIKKINKSAGRSSKRSTSQLTDQE-----DQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQAN
         D ++ R   QQ   P DQQ +RP    ++   R + + TS+  DQ+     DQQ SRP  Q+ ++P D ++ R   QQ   P DQQ +
Subjt:  TD-RSRRSTSQQADHPRDQQANRPIKKINKSAGRSSKRSTSQLTDQE-----DQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQAN

RUS92128.1 hypothetical protein EGW08_000152 [Elysia chlorotica]9.8e-1037.43Show/hide
Query:  HPRDQQANRPIKKINKSAGRSSKRSTSQLTDQ-------EDQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQEDQQVNRPIIQEINKPTD-RSRR
        H RD  A  P  K N   G+ +         +        DQ+ +RP  Q+ N+PTD   + T+R + + T++P    DQQ NRP  Q+ N+P D ++ R
Subjt:  HPRDQQANRPIKKINKSAGRSSKRSTSQLTDQ-------EDQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQEDQQVNRPIIQEINKPTD-RSRR

Query:  STSQQADHPRDQQANRPI-KKINKSAGRSSKRSTSQLTDQ-EDQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQAN
         T QQA  P DQQANRP  ++ N+   + + R T Q T +  DQQ +RP  Q+ N+P D ++ R T QQ + P DQQ N
Subjt:  STSQQADHPRDQQANRPI-KKINKSAGRSSKRSTSQLTDQ-EDQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQAN

VEN61677.1 unnamed protein product [Callosobruchus maculatus]2.7e-0729.69Show/hide
Query:  DSKKGSLSQQADHPRDQQANRPIKKINKSAGRSSK---RSTSQLTD-QEDQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQ-EDQQVNRPIIQEI
        D +    + + D P D+  +RP ++ ++   R  +   R T + TD Q D+Q  R   ++ ++ TDR+ R T R + R T +PTD+  D+  +RP  +  
Subjt:  DSKKGSLSQQADHPRDQQANRPIKKINKSAGRSSK---RSTSQLTD-QEDQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQ-EDQQVNRPIIQEI

Query:  NKP------TDRSRRSTSQQADHPRDQQANRPIKKINKSAGRSSKRSTSQLTDQEDQQVSRPIIQEINKPTDR-SRRSTSQQADHPRDQQAN
        ++P      TDR+ R T +  D P D+  +RP ++ ++   R + R T + TD++D+Q  R   ++ ++ TDR + R T +Q D   D+Q +
Subjt:  NKP------TDRSRRSTSQQADHPRDQQANRPIKKINKSAGRSSKRSTSQLTDQEDQQVSRPIIQEINKPTDR-SRRSTSQQADHPRDQQAN

XP_042887401.1 probable hemoglobin and hemoglobin-haptoglobin-binding protein 3 [Penaeus japonicus]2.9e-0638.58Show/hide
Query:  QQADHPRDQQANRPI-KKINKSAGRSSKRSTSQLTDQEDQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQEDQQVNRPIIQEINKPTDRSRRSTS
        QQAD P DQQ NRP  ++ ++   R + + T+Q     DQQ  RP  ++ NKPTD+  +         T++PT   DQQ NRP  Q+ NK TD       
Subjt:  QQADHPRDQQANRPI-KKINKSAGRSSKRSTSQLTDQEDQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQEDQQVNRPIIQEINKPTDRSRRSTS

Query:  QQADHPRDQQANRPIKKINKSAGRSSK
        QQ + P DQQ ++P  +  ++ GR+SK
Subjt:  QQADHPRDQQANRPIKKINKSAGRSSK

TrEMBL top hitse value%identityAlignment
A0A0M8ZNX4 Single-stranded DNA-binding protein, mitochondrial (Fragment)1.2e-1035.98Show/hide
Query:  QQADHPRDQQANRPIKKINKSAGRSSKRSTSQLTDQE-----DQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQE-----DQQVNRPIIQEINKP
        QQ   P DQQ +RP    ++   R + + TS+  DQ+     DQQ SRP  Q+ ++P D   + TSR + + TS+P DQ+     DQQ +RP  Q+ ++P
Subjt:  QQADHPRDQQANRPIKKINKSAGRSSKRSTSQLTDQE-----DQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQE-----DQQVNRPIIQEINKP

Query:  TD-RSRRSTSQQADHPRDQQANRPIKKINKSAGRSSKRSTSQLTDQE-----DQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQAN
         D ++ R   QQ   P DQQ +RP    ++   R + + TS+  DQ+     DQQ SRP  Q+ ++P D ++ R   QQ   P DQQ +
Subjt:  TD-RSRRSTSQQADHPRDQQANRPIKKINKSAGRSSKRSTSQLTDQE-----DQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQAN

A0A2U9BDU1 Putative angiopoietin-4-like1.0e-0432Show/hide
Query:  GSLSQQADHPRDQQANR-PIKKINKSAGRSSKRSTSQLTDQ-EDQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQE-----DQQVNRPIIQEINK
        G   QQ + P DQ+  R P  + N+     + R T   T++  DQQ +RP  Q+  +PTD     T+R +   T++P DQ+     D Q  RP  Q+  +
Subjt:  GSLSQQADHPRDQQANR-PIKKINKSAGRSSKRSTSQLTDQ-EDQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQE-----DQQVNRPIIQEINK

Query:  PTD-----------------RSRRSTSQQADHPRDQQANR-PIKKINKSAGRSSKRSTSQLTDQ-EDQQVSRPIIQEINKPTDRSRRSTSQQADHPRDQQ
        PTD                 ++ R   QQ   P DQQ NR P  + N      + R T   T++  DQQ +RP  Q+ N+PTD   + T++Q DH   +Q
Subjt:  PTD-----------------RSRRSTSQQADHPRDQQANR-PIKKINKSAGRSSKRSTSQLTDQ-EDQQVSRPIIQEINKPTDRSRRSTSQQADHPRDQQ

A0A433UEB9 Uncharacterized protein4.7e-1037.43Show/hide
Query:  HPRDQQANRPIKKINKSAGRSSKRSTSQLTDQ-------EDQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQEDQQVNRPIIQEINKPTD-RSRR
        H RD  A  P  K N   G+ +         +        DQ+ +RP  Q+ N+PTD   + T+R + + T++P    DQQ NRP  Q+ N+P D ++ R
Subjt:  HPRDQQANRPIKKINKSAGRSSKRSTSQLTDQ-------EDQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQEDQQVNRPIIQEINKPTD-RSRR

Query:  STSQQADHPRDQQANRPI-KKINKSAGRSSKRSTSQLTDQ-EDQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQAN
         T QQA  P DQQANRP  ++ N+   + + R T Q T +  DQQ +RP  Q+ N+P D ++ R T QQ + P DQQ N
Subjt:  STSQQADHPRDQQANRPI-KKINKSAGRSSKRSTSQLTDQ-EDQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQAN

A0A653DPF2 Uncharacterized protein1.3e-0729.69Show/hide
Query:  DSKKGSLSQQADHPRDQQANRPIKKINKSAGRSSK---RSTSQLTD-QEDQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQ-EDQQVNRPIIQEI
        D +    + + D P D+  +RP ++ ++   R  +   R T + TD Q D+Q  R   ++ ++ TDR+ R T R + R T +PTD+  D+  +RP  +  
Subjt:  DSKKGSLSQQADHPRDQQANRPIKKINKSAGRSSK---RSTSQLTD-QEDQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQ-EDQQVNRPIIQEI

Query:  NKP------TDRSRRSTSQQADHPRDQQANRPIKKINKSAGRSSKRSTSQLTDQEDQQVSRPIIQEINKPTDR-SRRSTSQQADHPRDQQAN
        ++P      TDR+ R T +  D P D+  +RP ++ ++   R + R T + TD++D+Q  R   ++ ++ TDR + R T +Q D   D+Q +
Subjt:  NKP------TDRSRRSTSQQADHPRDQQANRPIKKINKSAGRSSKRSTSQLTDQEDQQVSRPIIQEINKPTDR-SRRSTSQQADHPRDQQAN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGACTGCAGAGCCAATCGATCGATGAGAGAGGAAATGGAGGCGAATCAAAGAGAAATACAATCTGGGTGTGAAGGAAAAGAGCGTTTTCGTTCAAACCCAAGACG
AATTGATGAGAAGAAAAGGGAAATTAAAGCTTGTAATAGCTTCTCACAGGCAAAGGATTTAGCATATGTAGCTCTTGGCTTTGAGCATGATAAATGTCAACATGTGAATC
TCGAAGACTCTAAGAAGGGATCATTAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAG
AGATCAACAAGCCAACTGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGCCGATCATC
CAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAACAGACCGATCATCCAAGAGATCAACAAGCCAACTGACCGATCAAGAAGATCAACAAGTCAGC
AGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACTGACCGATCAAGAAGAT
CAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGACTGCAGAGCCAATCGATCGATGAGAGAGGAAATGGAGGCGAATCAAAGAGAAATACAATCTGGGTGTGAAGGAAAAGAGCGTTTTCGTTCAAACCCAAGACG
AATTGATGAGAAGAAAAGGGAAATTAAAGCTTGTAATAGCTTCTCACAGGCAAAGGATTTAGCATATGTAGCTCTTGGCTTTGAGCATGATAAATGTCAACATGTGAATC
TCGAAGACTCTAAGAAGGGATCATTAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAG
AGATCAACAAGCCAACTGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGCCGATCATC
CAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAACAGACCGATCATCCAAGAGATCAACAAGCCAACTGACCGATCAAGAAGATCAACAAGTCAGC
AGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACTGACCGATCAAGAAGAT
CAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAATTGA
Protein sequenceShow/hide protein sequence
MLDCRANRSMREEMEANQREIQSGCEGKERFRSNPRRIDEKKREIKACNSFSQAKDLAYVALGFEHDKCQHVNLEDSKKGSLSQQADHPRDQQANRPIKKINKSAGRSSK
RSTSQLTDQEDQQVSRPIIQEINKPTDRSRRSTSRSSKRSTSQPTDQEDQQVNRPIIQEINKPTDRSRRSTSQQADHPRDQQANRPIKKINKSAGRSSKRSTSQLTDQED
QQVSRPIIQEINKPTDRSRRSTSQQADHPRDQQAN