| GenBank top hits | e value | %identity | Alignment |
|---|
| PKU68330.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum] | 5.6e-26 | 41.72 | Show/hide |
Query: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAKPLD-SPNPVT
+P+ SL+ +P+ KL+G P HL++FGC C+P LKPYT + L P++ + FLGY+ +KGY CYN T K +SRHV+FHE TFP+A +P+P T
Subjt: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAKPLD-SPNPVT
Query: PLHPDITPLLTLLHTSLPSPPTQLSTVDTNSP------PREILHVSSSNISDLSTSESSHEHS
P PLL + H+++ + QL T +SP P ILH SS I+ T S+H+ +
Subjt: PLHPDITPLLTLLHTSLPSPPTQLSTVDTNSP------PREILHVSSSNISDLSTSESSHEHS
|
|
| PRQ49208.1 putative RNA-directed DNA polymerase [Rosa chinensis] | 6.2e-25 | 42.77 | Show/hide |
Query: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAK-PLDSPNPVT
MP ++L+M SPFE L+ P + H++VFGC CYPLLKPY + L+PKT+ IF+G+ + YKG+ICY+P+++KSI+SRHVIF E+ F F P S + V
Subjt: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAK-PLDSPNPVT
Query: PLHPDITP--LLTLLHTSL--PSPPTQLSTVDTN-SPPREILHVSSSNISDLSTSESSHEHSVSQN
+ P + T LHT+L SP QL + + SPP S ++I + S+S ++ +H + N
Subjt: PLHPDITP--LLTLLHTSL--PSPPTQLSTVDTN-SPPREILHVSSSNISDLSTSESSHEHSVSQN
|
|
| RVW18976.1 Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera] | 9.0e-24 | 51.28 | Show/hide |
Query: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAKPLDSPNPVTP
MPTS+LN SPFEKL+ P+ LK FGC CYPL +PY KH LEPK F+GY+L Y+C+ P T+K SRHVIFHE TFPF+ P NP +P
Subjt: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAKPLDSPNPVTP
Query: LHPDITPLLTLLHTSLP
P +T+ SLP
Subjt: LHPDITPLLTLLHTSLP
|
|
| TQE01264.1 hypothetical protein C1H46_013171 [Malus baccata] | 1.8e-24 | 41.67 | Show/hide |
Query: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAKPLDS------
M +L MSSPF+ L+G +P + HLKVFGCAC+PLLK L+PKTSQ IF+GY +YKGY+C NP+T K VSRHV+F ETTFP++ + S
Subjt: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAKPLDS------
Query: -PNPVTPLHPDITPLLTLLHTSLPSP-PTQLSTVDTNSPPREILHVSSSNISDLSTSESSHEHSVSQNVHNPASSIAVVPTACSSSTTHSPP
+P + P + P L H ++ SP P Q S ++PP N S+ S S S+ V +P S + PTA + +T S P
Subjt: -PNPVTPLHPDITPLLTLLHTSLPSP-PTQLSTVDTNSPPREILHVSSSNISDLSTSESSHEHSVSQNVHNPASSIAVVPTACSSSTTHSPP
|
|
| TQE09310.1 hypothetical protein C1H46_005046 [Malus baccata] | 8.2e-25 | 64.37 | Show/hide |
Query: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFP
MPT L M SPFEKLY P L HLK+FGCACYP L+PY H L PKTS+ IFLGY +YKG+IC+NP K IVSRHV+F E FP
Subjt: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFP
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2I0VY53 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.7e-26 | 41.72 | Show/hide |
Query: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAKPLD-SPNPVT
+P+ SL+ +P+ KL+G P HL++FGC C+P LKPYT + L P++ + FLGY+ +KGY CYN T K +SRHV+FHE TFP+A +P+P T
Subjt: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAKPLD-SPNPVT
Query: PLHPDITPLLTLLHTSLPSPPTQLSTVDTNSP------PREILHVSSSNISDLSTSESSHEHS
P PLL + H+++ + QL T +SP P ILH SS I+ T S+H+ +
Subjt: PLHPDITPLLTLLHTSLPSPPTQLSTVDTNSP------PREILHVSSSNISDLSTSESSHEHS
|
|
| A0A2P6RRZ9 Putative RNA-directed DNA polymerase | 3.0e-25 | 42.77 | Show/hide |
Query: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAK-PLDSPNPVT
MP ++L+M SPFE L+ P + H++VFGC CYPLLKPY + L+PKT+ IF+G+ + YKG+ICY+P+++KSI+SRHVIF E+ F F P S + V
Subjt: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAK-PLDSPNPVT
Query: PLHPDITP--LLTLLHTSL--PSPPTQLSTVDTN-SPPREILHVSSSNISDLSTSESSHEHSVSQN
+ P + T LHT+L SP QL + + SPP S ++I + S+S ++ +H + N
Subjt: PLHPDITP--LLTLLHTSL--PSPPTQLSTVDTN-SPPREILHVSSSNISDLSTSESSHEHSVSQN
|
|
| A0A438C7T3 Retrovirus-related Pol polyprotein from transposon RE2 | 4.4e-24 | 51.28 | Show/hide |
Query: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAKPLDSPNPVTP
MPTS+LN SPFEKL+ P+ LK FGC CYPL +PY KH LEPK F+GY+L Y+C+ P T+K SRHVIFHE TFPF+ P NP +P
Subjt: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAKPLDSPNPVTP
Query: LHPDITPLLTLLHTSLP
P +T+ SLP
Subjt: LHPDITPLLTLLHTSLP
|
|
| A0A540MR48 Uncharacterized protein | 8.8e-25 | 41.67 | Show/hide |
Query: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAKPLDS------
M +L MSSPF+ L+G +P + HLKVFGCAC+PLLK L+PKTSQ IF+GY +YKGY+C NP+T K VSRHV+F ETTFP++ + S
Subjt: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAKPLDS------
Query: -PNPVTPLHPDITPLLTLLHTSLPSP-PTQLSTVDTNSPPREILHVSSSNISDLSTSESSHEHSVSQNVHNPASSIAVVPTACSSSTTHSPP
+P + P + P L H ++ SP P Q S ++PP N S+ S S S+ V +P S + PTA + +T S P
Subjt: -PNPVTPLHPDITPLLTLLHTSLPSP-PTQLSTVDTNSPPREILHVSSSNISDLSTSESSHEHSVSQNVHNPASSIAVVPTACSSSTTHSPP
|
|
| A0A540NFL3 Integrase catalytic domain-containing protein | 3.9e-25 | 64.37 | Show/hide |
Query: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFP
MPT L M SPFEKLY P L HLK+FGCACYP L+PY H L PKTS+ IFLGY +YKG+IC+NP K IVSRHV+F E FP
Subjt: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFP
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.8e-04 | 30.63 | Show/hide |
Query: HLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAKPLDSPNPVTPLHPDITPLLTLLHTSLPSPPTQL
HLKVFGC + + + L+ K+ IF+GY E GY ++P+ KK I SR V+F E+ A + + I P + ++ +P +
Subjt: HLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAKPLDSPNPVTPLHPDITPLLTLLHTSLPSPPTQL
Query: STVDTNSPPRE
ST D S E
Subjt: STVDTNSPPRE
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.8e-19 | 34.11 | Show/hide |
Query: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAKPLDSPNPVTP
+PT L + SPF+KL+G +P+ L+VFGCACYP L+PY +H L+ K+ Q +FLGY+L Y+C + T + +SRHV F E FPF+ L + +PV
Subjt: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAKPLDSPNPVTP
Query: LHPDITPLLTLLHTSLP-----------SPPTQLSTVDTN-SPPREILHVSSSNI-SDLSTSESSHEHSVSQNVHNPASSIAVVPTACSSSTTHSPPSTA
+ + + HT+LP S P +T ++ S P VSSSN+ S S+S S + + P + T + THS +T+
Subjt: LHPDITPLLTLLHTSLP-----------SPPTQLSTVDTN-SPPREILHVSSSNI-SDLSTSESSHEHSVSQNVHNPASSIAVVPTACSSSTTHSPPSTA
Query: ASDLPFATCSTLAE
++ + S LA+
Subjt: ASDLPFATCSTLAE
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 9.7e-21 | 35.26 | Show/hide |
Query: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAKPLDSPNPVTP
+PT L + SPF+KL+G P+ LKVFGCACYP L+PY +H LE K+ Q F+GY+L Y+C + T + SRHV F E FPF+ +
Subjt: MPTSSLNMSSPFEKLYGYTPDLHHLKVFGCACYPLLKPYTKHNLEPKTSQHIFLGYTLEYKGYICYNPITKKSIVSRHVIFHETTFPFAKPLDSPNPVTP
Query: LHPDITPLLTLLHTSLPSPPTQLSTVDTNSPPREILHVSSSNISDLSTSESSHEHSVSQNVHNPASSIAVVPTACSSSTTHSPPSTAASD
D P HT+LP+ P L P + S+ S L T++ S + S ++ +P+SS P+ T P T S+
Subjt: LHPDITPLLTLLHTSLPSPPTQLSTVDTNSPPREILHVSSSNISDLSTSESSHEHSVSQNVHNPASSIAVVPTACSSSTTHSPPSTAASD
|
|
