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Lag0026592 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026592
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr10:39452514..39456060
RNA-Seq ExpressionLag0026592
SyntenyLag0026592
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5945963.1 hypothetical protein HYC85_016191 [Camellia sinensis]1.5e-1032.26Show/hide
Query:  AVGWSSFTEYAAIRRNLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEI
        A GW       A+ + L+  GVG V+R+   E+M    + + F V  D  EA A   ++ +ARD GF ++ +E DS  +V  +REE    SE G ++ + 
Subjt:  AVGWSSFTEYAAIRRNLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEI

Query:  CKVAGQFQRCHFSLCRRDLNRVAHA-ARVAVEDEMEGVWLEEYPSSLAVAVRREI
              F R H S   R  N +AH  AR+A     + VW+ + P+SL      E+
Subjt:  CKVAGQFQRCHFSLCRRDLNRVAHA-ARVAVEDEMEGVWLEEYPSSLAVAVRREI

XP_028115286.1 uncharacterized protein LOC114313136 isoform X1 [Camellia sinensis]2.5e-1032.26Show/hide
Query:  AVGWSSFTEYAAIRRNLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEI
        A GW       A+ + L+  GVG V+R+   E+M    + + F V  D  EA A   ++ +ARD G  ++ +E DS  +V ++REE    SE G ++ + 
Subjt:  AVGWSSFTEYAAIRRNLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEI

Query:  CKVAGQFQRCHFSLCRRDLNRVAHA-ARVAVEDEMEGVWLEEYPSSLAVAVRREI
          V   F R H S   R  N +AH  AR+A       VW+E  P+SL      ++
Subjt:  CKVAGQFQRCHFSLCRRDLNRVAHA-ARVAVEDEMEGVWLEEYPSSLAVAVRREI

XP_028115288.1 uncharacterized protein LOC114313136 isoform X3 [Camellia sinensis]2.5e-1032.26Show/hide
Query:  AVGWSSFTEYAAIRRNLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEI
        A GW       A+ + L+  GVG V+R+   E+M    + + F V  D  EA A   ++ +ARD G  ++ +E DS  +V ++REE    SE G ++ + 
Subjt:  AVGWSSFTEYAAIRRNLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEI

Query:  CKVAGQFQRCHFSLCRRDLNRVAHA-ARVAVEDEMEGVWLEEYPSSLAVAVRREI
          V   F R H S   R  N +AH  AR+A       VW+E  P+SL      ++
Subjt:  CKVAGQFQRCHFSLCRRDLNRVAHA-ARVAVEDEMEGVWLEEYPSSLAVAVRREI

XP_028115289.1 uncharacterized protein LOC114313136 isoform X4 [Camellia sinensis]2.5e-1032.26Show/hide
Query:  AVGWSSFTEYAAIRRNLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEI
        A GW       A+ + L+  GVG V+R+   E+M    + + F V  D  EA A   ++ +ARD G  ++ +E DS  +V ++REE    SE G ++ + 
Subjt:  AVGWSSFTEYAAIRRNLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEI

Query:  CKVAGQFQRCHFSLCRRDLNRVAHA-ARVAVEDEMEGVWLEEYPSSLAVAVRREI
          V   F R H S   R  N +AH  AR+A       VW+E  P+SL      ++
Subjt:  CKVAGQFQRCHFSLCRRDLNRVAHA-ARVAVEDEMEGVWLEEYPSSLAVAVRREI

XP_028115297.1 uncharacterized protein LOC114313136 isoform X6 [Camellia sinensis]2.5e-1032.26Show/hide
Query:  AVGWSSFTEYAAIRRNLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEI
        A GW       A+ + L+  GVG V+R+   E+M    + + F V  D  EA A   ++ +ARD G  ++ +E DS  +V ++REE    SE G ++ + 
Subjt:  AVGWSSFTEYAAIRRNLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEI

Query:  CKVAGQFQRCHFSLCRRDLNRVAHA-ARVAVEDEMEGVWLEEYPSSLAVAVRREI
          V   F R H S   R  N +AH  AR+A       VW+E  P+SL      ++
Subjt:  CKVAGQFQRCHFSLCRRDLNRVAHA-ARVAVEDEMEGVWLEEYPSSLAVAVRREI

TrEMBL top hitse value%identityAlignment
A0A2N9ESZ1 Uncharacterized protein3.9e-0931.62Show/hide
Query:  AIRRNLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEICKVAGQFQRCH
        AI ++ ++ G+G VVRD+   ++ T  + V      +L+EA A R ++  AR+ G L+++ E DS +++  +  ++ + +  GL++E+   +   FQR  
Subjt:  AIRRNLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEICKVAGQFQRCH

Query:  FSLCRRDLNRVAHA-ARVAVEDEMEGVWLEEYPSSL
        F+  RR  N VAHA AR A++     VW+E+ P  +
Subjt:  FSLCRRDLNRVAHA-ARVAVEDEMEGVWLEEYPSSL

A0A7J7GYW5 Uncharacterized protein7.1e-1132.26Show/hide
Query:  AVGWSSFTEYAAIRRNLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEI
        A GW       A+ + L+  GVG V+R+   E+M    + + F V  D  EA A   ++ +ARD GF ++ +E DS  +V  +REE    SE G ++ + 
Subjt:  AVGWSSFTEYAAIRRNLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEI

Query:  CKVAGQFQRCHFSLCRRDLNRVAHA-ARVAVEDEMEGVWLEEYPSSLAVAVRREI
              F R H S   R  N +AH  AR+A     + VW+ + P+SL      E+
Subjt:  CKVAGQFQRCHFSLCRRDLNRVAHA-ARVAVEDEMEGVWLEEYPSSLAVAVRREI

A0A7J9JAF5 RNase H domain-containing protein (Fragment)8.6e-0930.97Show/hide
Query:  VGWSSFTEYAAIRRNLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEIC
        + W      AA +    +S  G ++R+EK E+M + + + S ++ V LVEA+A    L  A++ GF+N+ VE D+ +V+  I +E+   +++  +I +I 
Subjt:  VGWSSFTEYAAIRRNLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEIC

Query:  KVAGQFQRCHFSLCRRDLNRVAH-AARVAVEDEMEGVWLEEYPSSLAVAVRREIV
             F    F   RR+ N+VAH  AR          W+E+ P     AV RE+V
Subjt:  KVAGQFQRCHFSLCRRDLNRVAH-AARVAVEDEMEGVWLEEYPSSLAVAVRREIV

A0A803LHG6 Uncharacterized protein2.7e-1031.29Show/hide
Query:  NLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEICKVAGQFQRCHFSLC
        N    G G V+RD   +++      +     VD+VEAMA+R +L +A + GF+ L +E D+  + S +++ K   +  G+++++I  +A     C F   
Subjt:  NLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEICKVAGQFQRCHFSLC

Query:  RRDLNRVAHA-ARVAVEDEMEGVWLEEYPSSLAVAVRREIVIEEASS
        +R+ N+VAH+ A+++   +   VWLEEYPS +      E+V+ ++SS
Subjt:  RRDLNRVAHA-ARVAVEDEMEGVWLEEYPSSLAVAVRREIVIEEASS

A0A803LYX2 Uncharacterized protein2.3e-0929.76Show/hide
Query:  LPSSIRRLCIVSVAVGWSSFTEYAAIRRNLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEK
        L  + + + I+  A+G     EYA  +      GV  V+RD + +++ +          VD+ EA+ +R +L +A D GF N+ +E DS  + + + +  
Subjt:  LPSSIRRLCIVSVAVGWSSFTEYAAIRRNLQRSGVGAVVRDEKEEIMLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEK

Query:  SIASEMGLLIEEICKVAGQFQRCHFSLCRRDLNRVAHA-ARVAVEDEMEGVWLEEYPSSLAVAVRREI
        S A+  G +I +I +++     C+FS  +R+ NRVAHA A++    +   VW++E PSS+A  V  ++
Subjt:  SIASEMGLLIEEICKVAGQFQRCHFSLCRRDLNRVAHA-ARVAVEDEMEGVWLEEYPSSLAVAVRREI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTTTCAAACTGCCAAAGTTTCCCTTTCAAACACCGTACAAATGTCATTTCACCATCGAATATCAGTTACAAACCTCCATTGTTCAAACTTCGTCGTCTTCCTCCG
TTCACGTACAAATGTTGGCCTCTGTCTAAAGTCCATCGGCTTCACGCTCCATCGTTGGCTCTGTCGTCTGGCAATTTGTCAGCTTCCATCTTCAATCCGTCGACTGTGTA
TTGTCTCAGTTGCTGTCGGTTGGAGTTCATTCACTGAATATGCAGCAATCAGACGAAATCTCCAACGAAGTGGTGTGGGTGCAGTAGTAAGAGATGAAAAGGAAGAGATT
ATGCTTACTTTTCTCAAAGTGGTGTCGTTTGTTGTCGGGGTGGACCTTGTCGAAGCCATGGCTGTGCGCGATAGTCTGTGTGTGGCGAGGGACTGTGGCTTCTTGAATCT
CGTAGTAGAGATGGACTCGGCGATGGTGGTGAGTCTAATTAGAGAGGAGAAGTCGATTGCGTCGGAGATGGGCTTGCTGATTGAGGAGATTTGCAAAGTCGCAGGCCAGT
TTCAAAGGTGCCATTTCTCTTTGTGCCGTCGGGATCTGAATAGGGTGGCGCATGCGGCACGGGTGGCGGTGGAAGACGAAATGGAGGGGGTGTGGCTGGAGGAATACCCA
TCGTCTTTAGCAGTAGCTGTCCGAAGGGAGATAGTTATCGAAGAGGCCTCTAGTGTGAATGTAAATGAACGTGTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCTTTCAAACTGCCAAAGTTTCCCTTTCAAACACCGTACAAATGTCATTTCACCATCGAATATCAGTTACAAACCTCCATTGTTCAAACTTCGTCGTCTTCCTCCG
TTCACGTACAAATGTTGGCCTCTGTCTAAAGTCCATCGGCTTCACGCTCCATCGTTGGCTCTGTCGTCTGGCAATTTGTCAGCTTCCATCTTCAATCCGTCGACTGTGTA
TTGTCTCAGTTGCTGTCGGTTGGAGTTCATTCACTGAATATGCAGCAATCAGACGAAATCTCCAACGAAGTGGTGTGGGTGCAGTAGTAAGAGATGAAAAGGAAGAGATT
ATGCTTACTTTTCTCAAAGTGGTGTCGTTTGTTGTCGGGGTGGACCTTGTCGAAGCCATGGCTGTGCGCGATAGTCTGTGTGTGGCGAGGGACTGTGGCTTCTTGAATCT
CGTAGTAGAGATGGACTCGGCGATGGTGGTGAGTCTAATTAGAGAGGAGAAGTCGATTGCGTCGGAGATGGGCTTGCTGATTGAGGAGATTTGCAAAGTCGCAGGCCAGT
TTCAAAGGTGCCATTTCTCTTTGTGCCGTCGGGATCTGAATAGGGTGGCGCATGCGGCACGGGTGGCGGTGGAAGACGAAATGGAGGGGGTGTGGCTGGAGGAATACCCA
TCGTCTTTAGCAGTAGCTGTCCGAAGGGAGATAGTTATCGAAGAGGCCTCTAGTGTGAATGTAAATGAACGTGTTGTTTAG
Protein sequenceShow/hide protein sequence
MIFQTAKVSLSNTVQMSFHHRISVTNLHCSNFVVFLRSRTNVGLCLKSIGFTLHRWLCRLAICQLPSSIRRLCIVSVAVGWSSFTEYAAIRRNLQRSGVGAVVRDEKEEI
MLTFLKVVSFVVGVDLVEAMAVRDSLCVARDCGFLNLVVEMDSAMVVSLIREEKSIASEMGLLIEEICKVAGQFQRCHFSLCRRDLNRVAHAARVAVEDEMEGVWLEEYP
SSLAVAVRREIVIEEASSVNVNERVV