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Lag0026616 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026616
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:39680962..39681444
RNA-Seq ExpressionLag0026616
SyntenyLag0026616
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG67205.1 hypothetical protein EZV62_008480 [Acer yangbiense]2.3e-1735.67Show/hide
Query:  EDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFDR
        +DL     +  + DE++++    EE     +  ++ C++GKV S KRVN+EAF+SV+       G   IE VGEN+F   F++  ++R +   G W FDR
Subjt:  EDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFDR

Query:  SLVILKEPRSAGLVLDVEFNDCAFGFRF--ITSLCAGRR-EKWLGSWEVRLEPWRRL
        SL++LK+P   G +  + FN   F  +   I  +C  RR  KWL   E   E W RL
Subjt:  SLVILKEPRSAGLVLDVEFNDCAFGFRF--ITSLCAGRR-EKWLGSWEVRLEPWRRL

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.1e-1939.2Show/hide
Query:  MEDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFD
        M+++   W  ++ T++E + V        L+  +++ CV+ K+ +SKR++ EA RSVM+S  RVH +TR E +G N++ I F+S  EK RV+S+G W F+
Subjt:  MEDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFD

Query:  RSLVILKEPRSAGLVLDVEFNDCAF
        +SL++L  P +    LD+ FN CAF
Subjt:  RSLVILKEPRSAGLVLDVEFNDCAF

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]5.2e-1737.19Show/hide
Query:  MEDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFD
        M+++   W ++ LT E+ + +    E   ++  +++   +GK+ +SKR++VEAFRSVM+S  +VH +T IE+ G NL+ I F+S  EK RV+++G W+F+
Subjt:  MEDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFD

Query:  RSLVILKEPRSAGLVLDVEFN
         SL++L  P +     D+ FN
Subjt:  RSLVILKEPRSAGLVLDVEFN

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.9e-1937.41Show/hide
Query:  MEDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFD
        M+D+   W ++ L  EE   +    +   L++ +I+ C +GK+  SKR+ VEAF SVM+   ++H +TRIE+ G N++ I F++  EK RV S G W FD
Subjt:  MEDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFD

Query:  RSLVILKEPRSAGLVLDVEFNDCAF--GFRFITSLCAGR-REKWLGS
        +SL+IL    +A   LD++ + CAF     +IT  C  +   K+LG+
Subjt:  RSLVILKEPRSAGLVLDVEFNDCAF--GFRFITSLCAGR-REKWLGS

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]4.2e-1938.4Show/hide
Query:  MEDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFD
        M+++   W ++ LT+EE +      +   L+  +I+ C +GK+ +SKR++ +A  SVM+   ++H +TRIE+ G N++ I F++  EK+RV+S+G W FD
Subjt:  MEDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFD

Query:  RSLVILKEPRSAGLVLDVEFNDCAF
        +SL +L  P +A   LDV+F  CAF
Subjt:  RSLVILKEPRSAGLVLDVEFNDCAF

TrEMBL top hitse value%identityAlignment
A0A5C7IDS9 CCHC-type domain-containing protein1.1e-1735.67Show/hide
Query:  EDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFDR
        +DL     +  + DE++++    EE     +  ++ C++GKV S KRVN+EAF+SV+       G   IE VGEN+F   F++  ++R +   G W FDR
Subjt:  EDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFDR

Query:  SLVILKEPRSAGLVLDVEFNDCAFGFRF--ITSLCAGRR-EKWLGSWEVRLEPWRRL
        SL++LK+P   G +  + FN   F  +   I  +C  RR  KWL   E   E W RL
Subjt:  SLVILKEPRSAGLVLDVEFNDCAFGFRF--ITSLCAGRR-EKWLGSWEVRLEPWRRL

A0A6J1D765 uncharacterized protein LOC1110179025.4e-2039.2Show/hide
Query:  MEDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFD
        M+++   W  ++ T++E + V        L+  +++ CV+ K+ +SKR++ EA RSVM+S  RVH +TR E +G N++ I F+S  EK RV+S+G W F+
Subjt:  MEDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFD

Query:  RSLVILKEPRSAGLVLDVEFNDCAF
        +SL++L  P +    LD+ FN CAF
Subjt:  RSLVILKEPRSAGLVLDVEFNDCAF

A0A6J1DP89 uncharacterized protein LOC1110229322.5e-1737.19Show/hide
Query:  MEDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFD
        M+++   W ++ LT E+ + +    E   ++  +++   +GK+ +SKR++VEAFRSVM+S  +VH +T IE+ G NL+ I F+S  EK RV+++G W+F+
Subjt:  MEDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFD

Query:  RSLVILKEPRSAGLVLDVEFN
         SL++L  P +     D+ FN
Subjt:  RSLVILKEPRSAGLVLDVEFN

A0A6J1DVS4 uncharacterized protein LOC1110235559.2e-2037.41Show/hide
Query:  MEDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFD
        M+D+   W ++ L  EE   +    +   L++ +I+ C +GK+  SKR+ VEAF SVM+   ++H +TRIE+ G N++ I F++  EK RV S G W FD
Subjt:  MEDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFD

Query:  RSLVILKEPRSAGLVLDVEFNDCAF--GFRFITSLCAGR-REKWLGS
        +SL+IL    +A   LD++ + CAF     +IT  C  +   K+LG+
Subjt:  RSLVILKEPRSAGLVLDVEFNDCAF--GFRFITSLCAGR-REKWLGS

A0A6J1DYG3 uncharacterized protein LOC1110246762.1e-1938.4Show/hide
Query:  MEDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFD
        M+++   W ++ LT+EE +      +   L+  +I+ C +GK+ +SKR++ +A  SVM+   ++H +TRIE+ G N++ I F++  EK+RV+S+G W FD
Subjt:  MEDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFD

Query:  RSLVILKEPRSAGLVLDVEFNDCAF
        +SL +L  P +A   LDV+F  CAF
Subjt:  RSLVILKEPRSAGLVLDVEFNDCAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACTTAGTTAGCCGGTGGAATTCTTGGAGATTGACAGACGAGGAGGCGAAGATGGTGCGGCCGGGGGAGGAGACATCGGGTTTGTCAATGGGTTCGATAGAGCC
GTGTGTGATTGGTAAAGTCTTCTCCTCCAAGCGTGTGAATGTGGAGGCGTTCCGGAGTGTTATGAGGTCAGCAAGGAGAGTTCATGGAGCGACACGCATAGAATCTGTGG
GTGAAAATTTATTTGCTATTCAGTTCCGCTCCAGAGGGGAAAAGAGGCGTGTGATGTCGACGGGTCGATGGGCTTTTGACCGGTCTCTGGTAATCCTGAAGGAGCCGAGG
TCTGCAGGTTTGGTATTGGATGTGGAGTTTAATGACTGTGCTTTTGGGTTCAGATTCATAACGTCCCTATGCGCTGGCAGACGAGAGAAATGGCTCGGCAGTTGGGAGGT
AAGATTGGAACCGTGGAGGAGGTTGGTGGCCGCGGGAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACTTAGTTAGCCGGTGGAATTCTTGGAGATTGACAGACGAGGAGGCGAAGATGGTGCGGCCGGGGGAGGAGACATCGGGTTTGTCAATGGGTTCGATAGAGCC
GTGTGTGATTGGTAAAGTCTTCTCCTCCAAGCGTGTGAATGTGGAGGCGTTCCGGAGTGTTATGAGGTCAGCAAGGAGAGTTCATGGAGCGACACGCATAGAATCTGTGG
GTGAAAATTTATTTGCTATTCAGTTCCGCTCCAGAGGGGAAAAGAGGCGTGTGATGTCGACGGGTCGATGGGCTTTTGACCGGTCTCTGGTAATCCTGAAGGAGCCGAGG
TCTGCAGGTTTGGTATTGGATGTGGAGTTTAATGACTGTGCTTTTGGGTTCAGATTCATAACGTCCCTATGCGCTGGCAGACGAGAGAAATGGCTCGGCAGTTGGGAGGT
AAGATTGGAACCGTGGAGGAGGTTGGTGGCCGCGGGAAGGTGA
Protein sequenceShow/hide protein sequence
MEDLVSRWNSWRLTDEEAKMVRPGEETSGLSMGSIEPCVIGKVFSSKRVNVEAFRSVMRSARRVHGATRIESVGENLFAIQFRSRGEKRRVMSTGRWAFDRSLVILKEPR
SAGLVLDVEFNDCAFGFRFITSLCAGRREKWLGSWEVRLEPWRRLVAAGR