; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026698 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026698
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:40721892..40723058
RNA-Seq ExpressionLag0026698
SyntenyLag0026698
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4351405.1 hypothetical protein F8388_001025, partial [Cannabis sativa]6.3e-3441.03Show/hide
Query:  PQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWNSESKVTINSYSEGHIDVLIKDKPTS-WRFTGFYGNPETDKRHFSWDLLERLKVCF
        P L+F+ ETK   G  E I+  + F   F+V   G SG L++LWN + +V++ S+S GHID L+K    + WRFTGFYGNP+   R  SW LL RLK  F
Subjt:  PQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWNSESKVTINSYSEGHIDVLIKDKPTS-WRFTGFYGNPETDKRHFSWDLLERLKVCF

Query:  DGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGLMDVGYSGDKCIHKLHKWNKNRLKGSLRSAIARKEEEIQTLYREENEQNWESIF
        D PW+ GGDF+E++S +EKK G  RSL  I  F +A+++C L+D+G+ G +C   L+K          R  +A  +E +   +     Q W ++F
Subjt:  DGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGLMDVGYSGDKCIHKLHKWNKNRLKGSLRSAIARKEEEIQTLYREENEQNWESIF

KAF4372682.1 hypothetical protein F8388_000849, partial [Cannabis sativa]3.7e-3441.54Show/hide
Query:  PQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWNSESKVTINSYSEGHIDVLIKDKPTS-WRFTGFYGNPETDKRHFSWDLLERLKVCF
        P L+F+ ETK   G  E I+  + F   F+V   G SG L++LWN + +V++ S+S GHID L+K    + WRFTGFYGNP+   R  SW LL RLK  F
Subjt:  PQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWNSESKVTINSYSEGHIDVLIKDKPTS-WRFTGFYGNPETDKRHFSWDLLERLKVCF

Query:  DGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGLMDVGYSGDKCIHKLHKWNKNRLKGSLRSAIARKEEEIQTLYREENEQNWESIF
        D PW+ GGDF+EV+S +EKK G  RSL  I  F +A+++C L+D+G+ G +C   L+K          R  +A  +E +   +     Q+W ++F
Subjt:  DGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGLMDVGYSGDKCIHKLHKWNKNRLKGSLRSAIARKEEEIQTLYREENEQNWESIF

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]5.0e-3151.77Show/hide
Query:  KPQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWNSESKVTINSYSEGHIDVLIKDKPTSWRFTGFYGNPETDKRHFSWDLLERLKVCF
        +PQL+F+ ETK +     R K +L F+   +V S G SG LM+LWNS+S V I S S GHID +I DK  SWRFTGFYGNP T KR  SW LLERL    
Subjt:  KPQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWNSESKVTINSYSEGHIDVLIKDKPTSWRFTGFYGNPETDKRHFSWDLLERLKVCF

Query:  DGPWLVGGDFSEVMSFDEKKRGSTRSLKQIR--PFTEAINR
        D PW++GGDF+E++S  EK  G  R+  Q+R  P  E ++R
Subjt:  DGPWLVGGDFSEVMSFDEKKRGSTRSLKQIR--PFTEAINR

XP_030922943.1 uncharacterized protein LOC115949807 [Quercus lobata]8.6e-3142.37Show/hide
Query:  PQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWNSESKVTINSYSEGHIDVLI--KDKPTSWRFTGFYGNPETDKRHFSWDLLERLKVC
        P+++F+ ETKS   + E++K +L F     VPSRG SG L +LW+S++ + I SYS  HID +I   D   SWRFT FYG  ET  R  SW LL  L   
Subjt:  PQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWNSESKVTINSYSEGHIDVLI--KDKPTSWRFTGFYGNPETDKRHFSWDLLERLKVC

Query:  FDGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGLMDVGYSGDKCIHKLHKWNKNRLKGSLRSAIARKE
        F+ PW   GDF+E++S  EK  G+ RS  Q+  F   +N+CG  D+GY G        K   NR+   L  A A  E
Subjt:  FDGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGLMDVGYSGDKCIHKLHKWNKNRLKGSLRSAIARKE

XP_030974624.1 uncharacterized protein LOC115994558 [Quercus lobata]1.5e-3044.37Show/hide
Query:  KPQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWNSESKVTINSYSEGHIDVLIKDKPTS--WRFTGFYGNPETDKRHFSWDLLERLKV
        KP+++F+METKS   + ERIK  + F   F VPS+G SG + + W  +  + I S+S  HID ++++  ++  WR TGFYG+PET +R+ SW LL  L  
Subjt:  KPQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWNSESKVTINSYSEGHIDVLIKDKPTS--WRFTGFYGNPETDKRHFSWDLLERLKV

Query:  CFDGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGLMDVGYSG
         F  PWL  GDF+E++S DEK  GS RS +Q+  F   ++ CG  D+GY G
Subjt:  CFDGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGLMDVGYSG

TrEMBL top hitse value%identityAlignment
A0A2N9EV43 Reverse transcriptase domain-containing protein5.2e-3441.01Show/hide
Query:  PQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWNSESKVTINSYSEGHIDVLIKDKPTS-WRFTGFYGNPETDKRHFSWDLLERLKVCF
        P+++F++ETK +  + E ++V L FE +F+VPS G SG L +LW +E+++ I ++S+ HID  ++ +    WR TGFYG PE  +R  SW LL+ L    
Subjt:  PQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWNSESKVTINSYSEGHIDVLIKDKPTS-WRFTGFYGNPETDKRHFSWDLLERLKVCF

Query:  DGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGLMDVGYSGDKCIHKLHKWNKNR-----LKGSLRSAIA
          PWL  GDF+E+++  EK+ G+ RSL+QI  F +A+N C L+D+GY G       + WN NR     ++G L  A+A
Subjt:  DGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGLMDVGYSGDKCIHKLHKWNKNR-----LKGSLRSAIA

A0A2N9F204 Uncharacterized protein5.6e-3636.94Show/hide
Query:  IVIQTKNSKPTALRVSEGYRRRLWYNPARRHENIMLERSRFGESSSDPSSSSFGWQRKPQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMI
        I+I ++ +    L +S  YRRRLW +PA  HE   +E S   E ++    +     + P ++F++ET  D G  ER++  L F+  F   S+   G L +
Subjt:  IVIQTKNSKPTALRVSEGYRRRLWYNPARRHENIMLERSRFGESSSDPSSSSFGWQRKPQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMI

Query:  LWNSESKVTINSYSEGHIDVLIKDK-PTSWRFTGFYGNPETDKRHFSWDLLERLKVCFDGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGL
        LW S + + +NS+S  HID ++ D  P +WRFTGFYG PET KR  SW LL RL      PW   GDF+E++  +EK+    RS +Q++ F + ++ CG 
Subjt:  LWNSESKVTINSYSEGHIDVLIKDK-PTSWRFTGFYGNPETDKRHFSWDLLERLKVCFDGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGL

Query:  MDVGYSGDKCIHKLHKWNKNRL
        +D+G++G K       W  NR+
Subjt:  MDVGYSGDKCIHKLHKWNKNRL

A0A2N9F775 Reverse transcriptase domain-containing protein1.4e-3437.67Show/hide
Query:  RLWYNPARRHENIMLERSRFGESSSDPSSSSFGWQRKPQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWNSESKVTINSYSEGHIDVL
        R W N  +R  N+    S  G   +  +  +    + P+++F++ETK D G+ E +++ L ++ +F+VPS G SG L +LW +E+++ I +YS+ HID  
Subjt:  RLWYNPARRHENIMLERSRFGESSSDPSSSSFGWQRKPQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWNSESKVTINSYSEGHIDVL

Query:  IKDKPTS-WRFTGFYGNPETDKRHFSWDLLERLKVCFDGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGLMDVGYSGDKCIHKLHKWNKNR
        +  + T  WR TGFYG PE  +R  SW LL+ L      PWL  GDF+E+++  EK+ G+ RSL+QI  F EA+N   L+D+GY G       + WN NR
Subjt:  IKDKPTS-WRFTGFYGNPETDKRHFSWDLLERLKVCFDGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGLMDVGYSGDKCIHKLHKWNKNR

Query:  -----LKGSLRSAIA
             ++G L  A+A
Subjt:  -----LKGSLRSAIA

A0A7J6DZ24 CCHC-type domain-containing protein3.1e-3441.03Show/hide
Query:  PQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWNSESKVTINSYSEGHIDVLIKDKPTS-WRFTGFYGNPETDKRHFSWDLLERLKVCF
        P L+F+ ETK   G  E I+  + F   F+V   G SG L++LWN + +V++ S+S GHID L+K    + WRFTGFYGNP+   R  SW LL RLK  F
Subjt:  PQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWNSESKVTINSYSEGHIDVLIKDKPTS-WRFTGFYGNPETDKRHFSWDLLERLKVCF

Query:  DGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGLMDVGYSGDKCIHKLHKWNKNRLKGSLRSAIARKEEEIQTLYREENEQNWESIF
        D PW+ GGDF+E++S +EKK G  RSL  I  F +A+++C L+D+G+ G +C   L+K          R  +A  +E +   +     Q W ++F
Subjt:  DGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGLMDVGYSGDKCIHKLHKWNKNRLKGSLRSAIARKEEEIQTLYREENEQNWESIF

A0A7J6FPV7 CCHC-type domain-containing protein1.8e-3441.54Show/hide
Query:  PQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWNSESKVTINSYSEGHIDVLIKDKPTS-WRFTGFYGNPETDKRHFSWDLLERLKVCF
        P L+F+ ETK   G  E I+  + F   F+V   G SG L++LWN + +V++ S+S GHID L+K    + WRFTGFYGNP+   R  SW LL RLK  F
Subjt:  PQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWNSESKVTINSYSEGHIDVLIKDKPTS-WRFTGFYGNPETDKRHFSWDLLERLKVCF

Query:  DGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGLMDVGYSGDKCIHKLHKWNKNRLKGSLRSAIARKEEEIQTLYREENEQNWESIF
        D PW+ GGDF+EV+S +EKK G  RSL  I  F +A+++C L+D+G+ G +C   L+K          R  +A  +E +   +     Q+W ++F
Subjt:  DGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGLMDVGYSGDKCIHKLHKWNKNRLKGSLRSAIARKEEEIQTLYREENEQNWESIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAAGAGAATCCTGCATATTGTGATTCAAACAAAAAACTCAAAACCAACTGCTTTGAGAGTCTCGGAGGGATATCGACGAAGGCTGTGGTACAACCCCGCCAGACG
CCATGAAAACATTATGTTGGAACGCTCAAGGTTTGGGGAATCTTCGAGCGATCCGAGCTCTTCCTCATTTGGTTGGCAAAGAAAACCCCAATTGATCTTTGTTATGGAAA
CCAAAAGTGATTATGGAAAGTGTGAGAGGATCAAAGTTGATCTGCAGTTTGAGTTTATGTTCAACGTTCCTAGTCGTGGTAATAGTGGGTGGCTCATGATTCTCTGGAAT
TCAGAATCGAAAGTTACAATTAACTCCTACTCCGAAGGCCATATTGATGTTTTAATTAAAGATAAGCCAACTTCTTGGAGATTCACTGGTTTTTATGGGAATCCCGAAAC
AGACAAAAGACACTTTTCTTGGGATTTATTGGAAAGGCTTAAGGTTTGCTTTGATGGGCCATGGCTTGTGGGGGGCGATTTTAGTGAAGTGATGTCTTTCGATGAAAAGA
AACGAGGCTCAACTAGAAGCTTAAAGCAAATAAGACCTTTCACGGAAGCGATTAACAGATGCGGCCTTATGGATGTGGGTTACTCGGGAGACAAGTGCATCCACAAGCTT
CACAAATGGAACAAAAATCGTCTAAAAGGCAGTCTTAGAAGTGCAATAGCAAGAAAAGAAGAAGAAATTCAAACTTTATATAGGGAAGAGAATGAACAGAACTGGGAGAG
CATTTTTTCGGCAGAGAATGAATTGGATGATCTTCTAGAGGAAGAAGAAGAATACTGGTGGATTAGATCACGAGATGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCAAGAGAATCCTGCATATTGTGATTCAAACAAAAAACTCAAAACCAACTGCTTTGAGAGTCTCGGAGGGATATCGACGAAGGCTGTGGTACAACCCCGCCAGACG
CCATGAAAACATTATGTTGGAACGCTCAAGGTTTGGGGAATCTTCGAGCGATCCGAGCTCTTCCTCATTTGGTTGGCAAAGAAAACCCCAATTGATCTTTGTTATGGAAA
CCAAAAGTGATTATGGAAAGTGTGAGAGGATCAAAGTTGATCTGCAGTTTGAGTTTATGTTCAACGTTCCTAGTCGTGGTAATAGTGGGTGGCTCATGATTCTCTGGAAT
TCAGAATCGAAAGTTACAATTAACTCCTACTCCGAAGGCCATATTGATGTTTTAATTAAAGATAAGCCAACTTCTTGGAGATTCACTGGTTTTTATGGGAATCCCGAAAC
AGACAAAAGACACTTTTCTTGGGATTTATTGGAAAGGCTTAAGGTTTGCTTTGATGGGCCATGGCTTGTGGGGGGCGATTTTAGTGAAGTGATGTCTTTCGATGAAAAGA
AACGAGGCTCAACTAGAAGCTTAAAGCAAATAAGACCTTTCACGGAAGCGATTAACAGATGCGGCCTTATGGATGTGGGTTACTCGGGAGACAAGTGCATCCACAAGCTT
CACAAATGGAACAAAAATCGTCTAAAAGGCAGTCTTAGAAGTGCAATAGCAAGAAAAGAAGAAGAAATTCAAACTTTATATAGGGAAGAGAATGAACAGAACTGGGAGAG
CATTTTTTCGGCAGAGAATGAATTGGATGATCTTCTAGAGGAAGAAGAAGAATACTGGTGGATTAGATCACGAGATGACTAG
Protein sequenceShow/hide protein sequence
MGKRILHIVIQTKNSKPTALRVSEGYRRRLWYNPARRHENIMLERSRFGESSSDPSSSSFGWQRKPQLIFVMETKSDYGKCERIKVDLQFEFMFNVPSRGNSGWLMILWN
SESKVTINSYSEGHIDVLIKDKPTSWRFTGFYGNPETDKRHFSWDLLERLKVCFDGPWLVGGDFSEVMSFDEKKRGSTRSLKQIRPFTEAINRCGLMDVGYSGDKCIHKL
HKWNKNRLKGSLRSAIARKEEEIQTLYREENEQNWESIFSAENELDDLLEEEEEYWWIRSRDD