; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026731 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026731
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionserine/arginine-rich SC35-like splicing factor SCL33
Genome locationchr10:41159837..41164063
RNA-Seq ExpressionLag0026731
SyntenyLag0026731
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043761.1 serine/arginine-rich SC35-like splicing factor SCL33 isoform X1 [Cucumis melo var. makuwa]4.1e-8668.54Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYELDG
        MRGRSYSYSPSPPRSYGRR RSPSPR RGGR R+LPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQ+VD ADAADAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYELDG

Query:  QLLLGRELTVVFAEENRKRPEEMRARDSSR--PRFDSINSESKYS--------SKLTSGNQQPSSCIQL---GKGKVVFLFLNCLWRGVGLSVTGVPHSD
        Q+LLG ELTVVFAEENRKRPEEMRARDSSR     +S+ + S +S        ++       PS+ + L   GKG          W G  ++  G+   D
Subjt:  QLLLGRELTVVFAEENRKRPEEMRARDSSR--PRFDSINSESKYS--------SKLTSGNQQPSSCIQL---GKGKVVFLFLNCLWRGVGLSVTGVPHSD

Query:  IHDHRTMVENIHVVQSIIPLLGLGGIQGQSRQGTESTESDPTRGRHMIQGAAATAEAGAVAIAKVIL
        IHDH TM+ENIHVV SIIPL G   IQG  R G   T S+PT+G HMIQGAA TAEAGAVAIA+VIL
Subjt:  IHDHRTMVENIHVVQSIIPLLGLGGIQGQSRQGTESTESDPTRGRHMIQGAAATAEAGAVAIAKVIL

KAG6596659.1 Serine/arginine-rich SC35-like splicing factor SCL30A, partial [Cucurbita argyrosperma subsp. sororia]5.2e-6581.88Show/hide
Query:  KKLKMRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKY
        +KLKMRGRSYSYSPSPPRSYGRRNRS SPRG GGRGR+LPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSG+PRGFGFVQY+DP+DAADAKY
Subjt:  KKLKMRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKY

Query:  ELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPR-FDSINSESKYSSKLTSGNQQPSS
        ELDGQ+LLGRELTVVFAEENRKRPE+MRARDSSR R +    S  +YS     G +   S
Subjt:  ELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPR-FDSINSESKYSSKLTSGNQQPSS

KAG7028197.1 Serine/arginine-rich SC35-like splicing factor SCL30A [Cucurbita argyrosperma subsp. argyrosperma]7.0e-7062.89Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYELDG
        MRGRSYSYSPSPPRSYGRRNRS SPRG GGRGR+LPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSG+PRGFGFVQY+DPADAADAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYELDG

Query:  QLLLGRELTVVFAEENRKRPEEMRARDSSRPRFDSINSESKYSSKLTSGNQQPSSCIQLGKGKVVFLFLNCLWRGVGLSVTGVPHSDIHDHRTMVENIHV
        Q+LLGRELTVVFAEENRKRPE+MRARDSSR R     S S   S L      P                            G  +S   ++ +   +   
Subjt:  QLLLGRELTVVFAEENRKRPEEMRARDSSRPRFDSINSESKYSSKLTSGNQQPSSCIQLGKGKVVFLFLNCLWRGVGLSVTGVPHSDIHDHRTMVENIHV

Query:  VQSIIPLLGLGGIQGQSRQGTESTESDPTRGRHMIQG--AAATAEAGAVAIAKVIL
         +  + L        QSR GTE T SDPT+G HMIQG  A A AEAGA AIA+ IL
Subjt:  VQSIIPLLGLGGIQGQSRQGTESTESDPTRGRHMIQG--AAATAEAGAVAIAKVIL

XP_023005833.1 serine/arginine-rich SC35-like splicing factor SCL33 isoform X1 [Cucurbita maxima]3.1e-6582.5Show/hide
Query:  KKLKMRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKY
        KKLKMRGRSYSYSPSPPRSYGRRNRS SPRG GGRGR+LPTSLLVRNLRHDCRPEDLRGLFG+FGPLKDIYLPRDYYSG+PRGFGFVQY+DPADAADAKY
Subjt:  KKLKMRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKY

Query:  ELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPR-FDSINSESKYSSKLTSGNQQPSS
        ELDGQ+LLGRELTVVFAEENRKRPE+MRARDSSR R +    S  +YS     G +   S
Subjt:  ELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPR-FDSINSESKYSSKLTSGNQQPSS

XP_023539101.1 serine/arginine-rich SC35-like splicing factor SCL33 [Cucurbita pepo subsp. pepo]1.1e-6583.12Show/hide
Query:  KKLKMRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKY
        KKLKMRGRSYSYSPSPPRSYGRRNRS SPRG GGRGR+LPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSG+PRGFGFVQY+DPADAADAKY
Subjt:  KKLKMRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKY

Query:  ELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPR-FDSINSESKYSSKLTSGNQQPSS
        ELDGQ+LLGRELTVVFAEENRKRPE+MRARDSSR R +    S  +YS     G +   S
Subjt:  ELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPR-FDSINSESKYSSKLTSGNQQPSS

TrEMBL top hitse value%identityAlignment
A0A5A7TQD2 Serine/arginine-rich SC35-like splicing factor SCL33 isoform X12.0e-8668.54Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYELDG
        MRGRSYSYSPSPPRSYGRR RSPSPR RGGR R+LPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQ+VD ADAADAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYELDG

Query:  QLLLGRELTVVFAEENRKRPEEMRARDSSR--PRFDSINSESKYS--------SKLTSGNQQPSSCIQL---GKGKVVFLFLNCLWRGVGLSVTGVPHSD
        Q+LLG ELTVVFAEENRKRPEEMRARDSSR     +S+ + S +S        ++       PS+ + L   GKG          W G  ++  G+   D
Subjt:  QLLLGRELTVVFAEENRKRPEEMRARDSSR--PRFDSINSESKYS--------SKLTSGNQQPSSCIQL---GKGKVVFLFLNCLWRGVGLSVTGVPHSD

Query:  IHDHRTMVENIHVVQSIIPLLGLGGIQGQSRQGTESTESDPTRGRHMIQGAAATAEAGAVAIAKVIL
        IHDH TM+ENIHVV SIIPL G   IQG  R G   T S+PT+G HMIQGAA TAEAGAVAIA+VIL
Subjt:  IHDHRTMVENIHVVQSIIPLLGLGGIQGQSRQGTESTESDPTRGRHMIQGAAATAEAGAVAIAKVIL

A0A6J1DCY5 serine/arginine-rich SC35-like splicing factor SCL332.1e-6488.89Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYELDG
        MRGRSYSYSPSPPRSYGRR+RSPSPR RGGRGR+LPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQ+VDPADA DAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYELDG

Query:  QLLLGRELTVVFAEENRKRPEEMRARDSSRPR-FDSINSESKYS
        Q+LLGRELTVVFAEENRKRPEEMRARDSSR R ++   S  +YS
Subjt:  QLLLGRELTVVFAEENRKRPEEMRARDSSRPR-FDSINSESKYS

A0A6J1G9Y3 serine/arginine-rich SC35-like splicing factor SCL33 isoform X17.3e-6580.98Show/hide
Query:  RPAKKLKMRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAAD
        R  KKLKMRGRSYSYSPSPPRSYGRRNRS SPRG GGRGR+LPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSG+PRGFGFVQY+DP+DAAD
Subjt:  RPAKKLKMRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAAD

Query:  AKYELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPR-FDSINSESKYSSKLTSGNQQPSS
        AKYELDGQ+LLGRELTVVFAEENRKRPE+MRARDSS  R +    S  +YS     G +   S
Subjt:  AKYELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPR-FDSINSESKYSSKLTSGNQQPSS

A0A6J1L0E4 serine/arginine-rich SC35-like splicing factor SCL33 isoform X25.6e-6582.39Show/hide
Query:  KLKMRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYE
        KLKMRGRSYSYSPSPPRSYGRRNRS SPRG GGRGR+LPTSLLVRNLRHDCRPEDLRGLFG+FGPLKDIYLPRDYYSG+PRGFGFVQY+DPADAADAKYE
Subjt:  KLKMRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYE

Query:  LDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPR-FDSINSESKYSSKLTSGNQQPSS
        LDGQ+LLGRELTVVFAEENRKRPE+MRARDSSR R +    S  +YS     G +   S
Subjt:  LDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPR-FDSINSESKYSSKLTSGNQQPSS

A0A6J1L3A1 serine/arginine-rich SC35-like splicing factor SCL33 isoform X11.5e-6582.5Show/hide
Query:  KKLKMRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKY
        KKLKMRGRSYSYSPSPPRSYGRRNRS SPRG GGRGR+LPTSLLVRNLRHDCRPEDLRGLFG+FGPLKDIYLPRDYYSG+PRGFGFVQY+DPADAADAKY
Subjt:  KKLKMRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKY

Query:  ELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPR-FDSINSESKYSSKLTSGNQQPSS
        ELDGQ+LLGRELTVVFAEENRKRPE+MRARDSSR R +    S  +YS     G +   S
Subjt:  ELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPR-FDSINSESKYSSKLTSGNQQPSS

SwissProt top hitse value%identityAlignment
O75494 Serine/arginine-rich splicing factor 102.4e-2044.34Show/hide
Query:  TSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPRFDSI
        TSL VRN+  D R EDLR  FGR+GP+ D+Y+P D+Y+  PRGF +VQ+ D  DA DA + LD + + GR++ + FA+ +RK P +M+A++       ++
Subjt:  TSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPRFDSI

Query:  NSESKY
         S S+Y
Subjt:  NSESKY

Q1PDV2 Serine/arginine-rich SC35-like splicing factor SCL281.5e-2748.08Show/hide
Query:  KMRGRSYSYSP-----SPPRSY-----GRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPA
        + R RS SYSP     SPPR        R    PS R     G   P+ LL+RNL  D RP DLR  F RFGPLKDIYLPR+YY+GEPRGFGFV+Y    
Subjt:  KMRGRSYSYSP-----SPPRSY-----GRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPA

Query:  DAADAKYELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPRFDSINSESKYSSK
        DAA+A   ++ +++ GRE+ +VFAEENRK P+EMR  + +  R       S  S +
Subjt:  DAADAKYELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPRFDSINSESKYSSK

Q8L3X8 Serine/arginine-rich SC35-like splicing factor SCL301.1e-3051.41Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSPSP----------RGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPAD
        MR  S  Y   P R YG R RSP P           G GGR  +   SLLVRN+  DCRPE+LR  F RFGP++D+Y+PRDYYSG+PRGF FV++VD  D
Subjt:  MRGRSYSYSPSPPRSYGRRNRSPSP----------RGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPAD

Query:  AADAKYELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPR
        A +A+  ++ +   GRE+TVV A E+RKRPEEMR +  +R R
Subjt:  AADAKYELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPR

Q9LHP2 Serine/arginine-rich SC35-like splicing factor SCL30A2.2e-5076.74Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSPSPRGR--GGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYEL
        MRGR  SY+PSPPR YGRR RSPSPRGR  G R  +LPTSLLVRNLRHDCR EDLR  F +FGP+KDIYLPRDYY+G+PRGFGF+Q++DPADAA+AK+++
Subjt:  MRGRSYSYSPSPPRSYGRRNRSPSPRGR--GGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYEL

Query:  DGQLLLGRELTVVFAEENRKRPEEMRARD
        DG LLLGRELTVVFAEENRK+P EMR RD
Subjt:  DGQLLLGRELTVVFAEENRKRPEEMRARD

Q9SEU4 Serine/arginine-rich SC35-like splicing factor SCL338.1e-5372.67Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSPSPRGR-GGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYELD
        MRGR  SY+PSPPR YGRR RSPSPRGR GGR R+LPTSLLVRNLRHDCR EDLR  F +FGP+KDIYLPRDYY+G+PRGFGFVQ++DPADAADAK+ +D
Subjt:  MRGRSYSYSPSPPRSYGRRNRSPSPRGR-GGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYELD

Query:  GQLLLGRELTVVFAEENRKRPEEMRARDSSRPRF-DSINSESKYSSKLTS
        G LLLGRELTVVFAEENRK+P EMRAR+    RF D   +  +Y S+  S
Subjt:  GQLLLGRELTVVFAEENRKRPEEMRARDSSRPRF-DSINSESKYSSKLTS

Arabidopsis top hitse value%identityAlignment
AT1G55310.1 SC35-like splicing factor 335.8e-5472.67Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSPSPRGR-GGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYELD
        MRGR  SY+PSPPR YGRR RSPSPRGR GGR R+LPTSLLVRNLRHDCR EDLR  F +FGP+KDIYLPRDYY+G+PRGFGFVQ++DPADAADAK+ +D
Subjt:  MRGRSYSYSPSPPRSYGRRNRSPSPRGR-GGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYELD

Query:  GQLLLGRELTVVFAEENRKRPEEMRARDSSRPRF-DSINSESKYSSKLTS
        G LLLGRELTVVFAEENRK+P EMRAR+    RF D   +  +Y S+  S
Subjt:  GQLLLGRELTVVFAEENRKRPEEMRARDSSRPRF-DSINSESKYSSKLTS

AT1G55310.2 SC35-like splicing factor 335.8e-5472.67Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSPSPRGR-GGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYELD
        MRGR  SY+PSPPR YGRR RSPSPRGR GGR R+LPTSLLVRNLRHDCR EDLR  F +FGP+KDIYLPRDYY+G+PRGFGFVQ++DPADAADAK+ +D
Subjt:  MRGRSYSYSPSPPRSYGRRNRSPSPRGR-GGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYELD

Query:  GQLLLGRELTVVFAEENRKRPEEMRARDSSRPRF-DSINSESKYSSKLTS
        G LLLGRELTVVFAEENRK+P EMRAR+    RF D   +  +Y S+  S
Subjt:  GQLLLGRELTVVFAEENRKRPEEMRARDSSRPRF-DSINSESKYSSKLTS

AT1G55310.3 SC35-like splicing factor 336.0e-5173.57Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSPSPRGR-GGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSG------------EPRGFGFVQYVD
        MRGR  SY+PSPPR YGRR RSPSPRGR GGR R+LPTSLLVRNLRHDCR EDLR  F +FGP+KDIYLPRDYY+G            +PRGFGFVQ++D
Subjt:  MRGRSYSYSPSPPRSYGRRNRSPSPRGR-GGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSG------------EPRGFGFVQYVD

Query:  PADAADAKYELDGQLLLGRELTVVFAEENRKRPEEMRARD
        PADAADAK+ +DG LLLGRELTVVFAEENRK+P EMRAR+
Subjt:  PADAADAKYELDGQLLLGRELTVVFAEENRKRPEEMRARD

AT3G13570.1 SC35-like splicing factor 30A1.6e-5176.74Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSPSPRGR--GGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYEL
        MRGR  SY+PSPPR YGRR RSPSPRGR  G R  +LPTSLLVRNLRHDCR EDLR  F +FGP+KDIYLPRDYY+G+PRGFGF+Q++DPADAA+AK+++
Subjt:  MRGRSYSYSPSPPRSYGRRNRSPSPRGR--GGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAADAKYEL

Query:  DGQLLLGRELTVVFAEENRKRPEEMRARD
        DG LLLGRELTVVFAEENRK+P EMR RD
Subjt:  DGQLLLGRELTVVFAEENRKRPEEMRARD

AT3G55460.1 SC35-like splicing factor 308.1e-3251.41Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSPSP----------RGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPAD
        MR  S  Y   P R YG R RSP P           G GGR  +   SLLVRN+  DCRPE+LR  F RFGP++D+Y+PRDYYSG+PRGF FV++VD  D
Subjt:  MRGRSYSYSPSPPRSYGRRNRSPSP----------RGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPAD

Query:  AADAKYELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPR
        A +A+  ++ +   GRE+TVV A E+RKRPEEMR +  +R R
Subjt:  AADAKYELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGTAAAAGAGTCCCCACGAGAAACCATAGACCTGCGAAGAAATTGAAAATGAGAGGTAGAAGTTACAGTTACAGTCCATCACCACCAAGGAGTTATGGCAGGAG
AAATCGTAGCCCTAGTCCAAGGGGTCGGGGAGGCCGTGGAAGGAATCTGCCAACAAGTCTTTTGGTTCGAAACCTAAGACACGACTGCAGGCCAGAGGACCTTCGTGGAT
TATTTGGGCGCTTTGGTCCTCTTAAGGACATTTACTTGCCACGAGATTATTATTCTGGGGAACCACGTGGCTTTGGATTTGTTCAGTACGTTGATCCTGCTGATGCTGCT
GATGCCAAGTATGAGTTGGATGGCCAACTTCTCCTTGGTCGTGAATTAACTGTTGTGTTTGCTGAGGAGAACAGGAAGAGACCTGAAGAGATGAGAGCAAGAGACTCATC
GAGACCGAGGTTTGATTCCATTAACAGTGAATCCAAATACTCGAGTAAATTGACTTCAGGCAATCAACAACCATCATCTTGTATCCAGCTAGGGAAAGGAAAAGTAGTAT
TTTTGTTTTTAAATTGCCTCTGGCGAGGGGTCGGTCTATCAGTTACAGGCGTTCCCCACTCCGATATTCACGATCACCGCACTATGGTCGAAAATATTCACGTAGTCCAG
AGTATTATTCCCCTGCTCGGTCTAGGCGGTATTCAAGGTCAATCTCGCCAAGGGACCGAAAGTACAGAGAGCGATCCTACTCGAGGTCGCCATATGATTCAAGGGGCCGC
AGCTACAGCCGAAGCAGGAGCCGTAGCTATAGCCAAAGTTATTCTAGAATGGAACTTGGATTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCGTAAAAGAGTCCCCACGAGAAACCATAGACCTGCGAAGAAATTGAAAATGAGAGGTAGAAGTTACAGTTACAGTCCATCACCACCAAGGAGTTATGGCAGGAG
AAATCGTAGCCCTAGTCCAAGGGGTCGGGGAGGCCGTGGAAGGAATCTGCCAACAAGTCTTTTGGTTCGAAACCTAAGACACGACTGCAGGCCAGAGGACCTTCGTGGAT
TATTTGGGCGCTTTGGTCCTCTTAAGGACATTTACTTGCCACGAGATTATTATTCTGGGGAACCACGTGGCTTTGGATTTGTTCAGTACGTTGATCCTGCTGATGCTGCT
GATGCCAAGTATGAGTTGGATGGCCAACTTCTCCTTGGTCGTGAATTAACTGTTGTGTTTGCTGAGGAGAACAGGAAGAGACCTGAAGAGATGAGAGCAAGAGACTCATC
GAGACCGAGGTTTGATTCCATTAACAGTGAATCCAAATACTCGAGTAAATTGACTTCAGGCAATCAACAACCATCATCTTGTATCCAGCTAGGGAAAGGAAAAGTAGTAT
TTTTGTTTTTAAATTGCCTCTGGCGAGGGGTCGGTCTATCAGTTACAGGCGTTCCCCACTCCGATATTCACGATCACCGCACTATGGTCGAAAATATTCACGTAGTCCAG
AGTATTATTCCCCTGCTCGGTCTAGGCGGTATTCAAGGTCAATCTCGCCAAGGGACCGAAAGTACAGAGAGCGATCCTACTCGAGGTCGCCATATGATTCAAGGGGCCGC
AGCTACAGCCGAAGCAGGAGCCGTAGCTATAGCCAAAGTTATTCTAGAATGGAACTTGGATTTCTAG
Protein sequenceShow/hide protein sequence
MDRKRVPTRNHRPAKKLKMRGRSYSYSPSPPRSYGRRNRSPSPRGRGGRGRNLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQYVDPADAA
DAKYELDGQLLLGRELTVVFAEENRKRPEEMRARDSSRPRFDSINSESKYSSKLTSGNQQPSSCIQLGKGKVVFLFLNCLWRGVGLSVTGVPHSDIHDHRTMVENIHVVQ
SIIPLLGLGGIQGQSRQGTESTESDPTRGRHMIQGAAATAEAGAVAIAKVILEWNLDF