; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026771 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026771
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:41717569..41719833
RNA-Seq ExpressionLag0026771
SyntenyLag0026771
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PRQ55763.1 putative RNA-directed DNA polymerase [Rosa chinensis]1.4e-2827.96Show/hide
Query:  WWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIGAMKDNLSGSNF
        +W  +W   +  K + F+WRL    LPTK  L K+       CV C+   E  LHLF +C  +   W   +             EE +  + D ++  + 
Subjt:  WWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIGAMKDNLSGSNF

Query:  DLVVIFWWSVWNLQNSLSWGG---QPDGLDLWA--FLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGDAGGGCVLQ
        +L  ++ W +W+ +N+L W G          WA  FL +Y        ++                R  W  PP   LK+N+D S +P++GD G G V++
Subjt:  DLVVIFWWSVWNLQNSLSWGG---QPDGLDLWA--FLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGDAGGGCVLQ

Query:  GADGE-------------------------GVQLARQLEFADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRVAHALA
           G                          G+ LA   E+ +F++E+D   +V  L   ++D SEVG ++DD +  L    + K+    R+ N VA+ LA
Subjt:  GADGE-------------------------GVQLARQLEFADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRVAHALA

Query:  SLAFS-YVDRVWLEEGPSEISDVLRLFIC
         LA S +++ VWLEE P  I DVL   +C
Subjt:  SLAFS-YVDRVWLEEGPSEISDVLRLFIC

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.2e-3228.04Show/hide
Query:  PSPSNLDRIRAWWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIG
        PS S+ + +R WW+G W++++  K K FLWRL  DRLPT  NL KR   +++ C  C    ED +HLFW C   E++W+ SKF       S F    I+ 
Subjt:  PSPSNLDRIRAWWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIG

Query:  AMKDNLSGSNFDLVVIFWWSVWNLQNSLSWGGQPD-----GLDLWAFLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPD
           ++LS ++F+ + +  W +WN +N+ ++          G++L  + N Y   F     R    + +  R+ +  E  +W+PP     K+N DAS    
Subjt:  AMKDNLSGSNFDLVVIFWWSVWNLQNSLSWGGQPD-----GLDLWAFLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPD

Query:  TGDAGGGCVLQGADGEGVQLA-------RQLEFADFVVETDSLRLVKI--LRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRVAHALASLAFS
           AG G ++    G+ +  A       + ++ A+ +   + L+L     +   ++D+SE G ++   +       +    F  R+GN+ AH LA  A  
Subjt:  TGDAGGGCVLQGADGEGVQLA-------RQLEFADFVVETDSLRLVKI--LRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRVAHALASLAFS

Query:  YVD-RVWLEEGPSEISDVLRL
          +  +W+E+ P E+   L +
Subjt:  YVD-RVWLEEGPSEISDVLRL

XP_023908235.1 uncharacterized protein LOC112019924 [Quercus suber]4.8e-2930Show/hide
Query:  WSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIGAMKDNLSGSNFD
        W  LW+L +  K K F WR  HD LPT+ NL K+   V  LC LC    E  +H  W C + + IW  S  A  +    Q  F  ++  + D L+ +  +
Subjt:  WSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIGAMKDNLSGSNFD

Query:  LVVIFWWSVWNLQNSLSWGG---QPDGLDLWAFLNDYLSTFHVGGRRCLAEDCLQARLG-----DQEERCVWRPPPAEELKLNVDASVKPDTGDAGGGCV
          ++  W +WN +N + +GG   +P  L+  A     +  F    ++  A   + A++G      Q +   W PPP    KLN DA+V  ++  +G G V
Subjt:  LVVIFWWSVWNLQNSLSWGG---QPDGLDLWAFLNDYLSTFHVGGRRCLAEDCLQARLG-----DQEERCVWRPPPAEELKLNVDASVKPDTGDAGGGCV

Query:  LQGADG-------------EGVQLA------RQLEFA------DFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRVAHA
        ++ + G             +G ++A      + LEFA        +VE DS+   K +  G    S +G ++ D+R +L+  +   V  + R GNRVA  
Subjt:  LQGADG-------------EGVQLA------RQLEFA------DFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRVAHA

Query:  LASLAFSY-VDRVWLEEGPS
        LA  A++  VD  W+EE PS
Subjt:  LASLAFSY-VDRVWLEEGPS

XP_030923330.1 uncharacterized protein LOC115950239 [Quercus lobata]3.3e-3028.31Show/hide
Query:  WSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIGAMKDNLSGSNFD
        WS +W+L +  K K F WR  H+ LPT VNL  R       C +C    E  +H  W+C  V+ IW  S     +    Q    +++  M++ L   N D
Subjt:  WSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIGAMKDNLSGSNFD

Query:  LVVIFW---WSVWNLQNSLSWGGQ---PDGLDLWAFLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGDAGGGCVLQ
         + +FW   W VW  +NSL  GG+   P  L+L A   +Y++ F        A++ L  +   Q    +W+PPP  E KLN DA+V  D G  G G +++
Subjt:  LVVIFW---WSVWNLQNSLSWGGQ---PDGLDLWAFLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGDAGGGCVLQ

Query:  GADGE-------------------------GVQLARQLEFADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRVAHALA
           GE                          ++      F+  +VE D++ +   +   + + S  G ++DD+  +L+      V  + R GN+VAH LA
Subjt:  GADGE-------------------------GVQLARQLEFADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRVAHALA

Query:  SLAFSYV--DRVWLEEGPSEISDVL
          A + +  D  W+E+ P    + L
Subjt:  SLAFSYV--DRVWLEEGPSEISDVL

XP_030925054.1 uncharacterized protein LOC115952115 [Quercus lobata]1.1e-2827.61Show/hide
Query:  SPSNLDRIRAWWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIGA
        S SN    R++W G+W+L V  K K F+WR+ ++ LPTK NL +R    S LC LC D  ED  H    C +V  +W    +     S     F +++  
Subjt:  SPSNLDRIRAWWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIGA

Query:  MKDNLSGSNFDLVVIFWWSVWNLQNSLSWGGQPDGLDLWAFLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGDAGG
        +         +L     W +WN +N+L +G   + +   +F+   L       +  +A    +  +     +  WRPP  + +K+N DA++   T  AG 
Subjt:  MKDNLSGSNFDLVVIFWWSVWNLQNSLSWGGQPDGLDLWAFLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGDAGG

Query:  GCVLQGADG-------------------------EGVQLARQLEFADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRV
        G +++   G                           VQLA +LEF   + E DS  ++  +  G   +S  G ++DD+R +L  + +       R GN V
Subjt:  GCVLQGADG-------------------------EGVQLARQLEFADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRV

Query:  AHALASLAFSYV-DRVWLEEGPSEIS
        A AL   A S V  +VW+   PS+I+
Subjt:  AHALASLAFSYV-DRVWLEEGPSEIS

TrEMBL top hitse value%identityAlignment
A0A2N9FBQ4 Reverse transcriptase domain-containing protein2.0e-2825.9Show/hide
Query:  PSPSNLDRIRAWWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIG
        P PSN   +   W+ +W L V  K + FLWR  H+ LPT+ NL +R      +C+ CN   E  +H+ W C   +++W    ++      +   F+E++ 
Subjt:  PSPSNLDRIRAWWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIG

Query:  AMKDNLSGSNFDLVVIFWWSVWNLQNSLSWGGQPDGL-DLWAFLNDYLSTF-HVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGD
            NL+     L  +  WS+W  +N +      + +  L     + L  +  V       +  +  +L  +   C WRPP    +K+N D +V  + G+
Subjt:  AMKDNLSGSNFDLVVIFWWSVWNLQNSLSWGGQPDGL-DLWAFLNDYLSTF-HVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGD

Query:  AGGGCVLQGADG-------------------------EGVQLARQLEFADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQG
        AG G +++ + G                           VQLA  L F D  +E DS+ +VK L     + +  G +++D +++ Q   + K +   R+G
Subjt:  AGGGCVLQGADG-------------------------EGVQLARQLEFADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQG

Query:  NRVAHALASLA-FSYVDRVWLEEGPSEISDVL
        N+VAH+LA  A  +   +VW+E  P ++  +L
Subjt:  NRVAHALASLA-FSYVDRVWLEEGPSEISDVL

A0A2N9HE46 Uncharacterized protein2.0e-2825.9Show/hide
Query:  PSPSNLDRIRAWWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIG
        P PSN   +   W+ +W L V  K + FLWR  H+ LPT+ NL +R      +C+ CN   E  +H+ W C   +++W    ++      +   F+E++ 
Subjt:  PSPSNLDRIRAWWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIG

Query:  AMKDNLSGSNFDLVVIFWWSVWNLQNSLSWGGQPDGL-DLWAFLNDYLSTF-HVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGD
            NL+     L  +  WS+W  +N +      + +  L     + L  +  V       +  +  +L  +   C WRPP    +K+N D +V  + G+
Subjt:  AMKDNLSGSNFDLVVIFWWSVWNLQNSLSWGGQPDGL-DLWAFLNDYLSTF-HVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGD

Query:  AGGGCVLQGADG-------------------------EGVQLARQLEFADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQG
        AG G +++ + G                           VQLA  L F D  +E DS+ +VK L     + +  G +++D +++ Q   + K +   R+G
Subjt:  AGGGCVLQGADG-------------------------EGVQLARQLEFADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQG

Query:  NRVAHALASLA-FSYVDRVWLEEGPSEISDVL
        N+VAH+LA  A  +   +VW+E  P ++  +L
Subjt:  NRVAHALASLA-FSYVDRVWLEEGPSEISDVL

A0A2P6SAP1 Putative RNA-directed DNA polymerase6.7e-2927.96Show/hide
Query:  WWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIGAMKDNLSGSNF
        +W  +W   +  K + F+WRL    LPTK  L K+       CV C+   E  LHLF +C  +   W   +             EE +  + D ++  + 
Subjt:  WWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIGAMKDNLSGSNF

Query:  DLVVIFWWSVWNLQNSLSWGG---QPDGLDLWA--FLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGDAGGGCVLQ
        +L  ++ W +W+ +N+L W G          WA  FL +Y        ++                R  W  PP   LK+N+D S +P++GD G G V++
Subjt:  DLVVIFWWSVWNLQNSLSWGG---QPDGLDLWA--FLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGDAGGGCVLQ

Query:  GADGE-------------------------GVQLARQLEFADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRVAHALA
           G                          G+ LA   E+ +F++E+D   +V  L   ++D SEVG ++DD +  L    + K+    R+ N VA+ LA
Subjt:  GADGE-------------------------GVQLARQLEFADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRVAHALA

Query:  SLAFS-YVDRVWLEEGPSEISDVLRLFIC
         LA S +++ VWLEE P  I DVL   +C
Subjt:  SLAFS-YVDRVWLEEGPSEISDVLRLFIC

A0A6J1DAR4 uncharacterized protein LOC1110189545.9e-3328.04Show/hide
Query:  PSPSNLDRIRAWWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIG
        PS S+ + +R WW+G W++++  K K FLWRL  DRLPT  NL KR   +++ C  C    ED +HLFW C   E++W+ SKF       S F    I+ 
Subjt:  PSPSNLDRIRAWWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIG

Query:  AMKDNLSGSNFDLVVIFWWSVWNLQNSLSWGGQPD-----GLDLWAFLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPD
           ++LS ++F+ + +  W +WN +N+ ++          G++L  + N Y   F     R    + +  R+ +  E  +W+PP     K+N DAS    
Subjt:  AMKDNLSGSNFDLVVIFWWSVWNLQNSLSWGGQPD-----GLDLWAFLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPD

Query:  TGDAGGGCVLQGADGEGVQLA-------RQLEFADFVVETDSLRLVKI--LRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRVAHALASLAFS
           AG G ++    G+ +  A       + ++ A+ +   + L+L     +   ++D+SE G ++   +       +    F  R+GN+ AH LA  A  
Subjt:  TGDAGGGCVLQGADGEGVQLA-------RQLEFADFVVETDSLRLVKI--LRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRVAHALASLAFS

Query:  YVD-RVWLEEGPSEISDVLRL
          +  +W+E+ P E+   L +
Subjt:  YVD-RVWLEEGPSEISDVLRL

A0A7N2MU32 Uncharacterized protein1.1e-2826.89Show/hide
Query:  RIRAWWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIGAMKDNLS
        R +  W  +W + V  K K F+WR   + +PTK  L++R     S C  C   VED LH  W C  ++ +W       FR S     F++++  +     
Subjt:  RIRAWWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIGAMKDNLS

Query:  GSNFDLVVIFWWSVWNLQNSLSWGGQPDGLDLWAF-LNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGDAGGGCVLQ
        G N +L  +  WSVWN +N        + L   A      L  F++  +R    D  Q R      +  WRPPP E +K+N D +       +G G V++
Subjt:  GSNFDLVVIFWWSVWNLQNSLSWGGQPDGLDLWAF-LNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGDAGGGCVLQ

Query:  GADG-------------------------EGVQLARQLEFADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRVAHALA
          +G                           +  A+ L F   ++E DSL +++ L    + ++  GLL++DVR + Q +D      + R GN VAH+LA
Subjt:  GADG-------------------------EGVQLARQLEFADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRVAHALA

Query:  SLAFSYVD-RVWLEEGPSEISDVLRLFICMI
          A    D   W+E+ P+ I  +++  + ++
Subjt:  SLAFSYVD-RVWLEEGPSEISDVLRLFICMI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.8e-0933.33Show/hide
Query:  DRIRAWWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIW
        + I  W+  +W  N + KH F  W +  +RL T+  L      + ++C+LCN   E R HLF+ CP   ++W
Subjt:  DRIRAWWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIW

AT2G02650.1 Ribonuclease H-like superfamily protein3.9e-1324.84Show/hide
Query:  LWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIG---AMKDNLSGSNFD
        +W+L+V  K K FLWR     L T   L  R+     +C  C    E   H+ +NCP  +S+W  +      +      FE+ +     +    + ++ D
Subjt:  LWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIG---AMKDNLSGSNFD

Query:  LVVIFW--WSVWNLQN---------SLSWGGQPDGLDLWAFLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASV---KPDT--
          + FW  W +W  +N         S  +  +    D   +LN   +T +      +A + +Q    D  +   W PPP   +K N D+      P T  
Subjt:  LVVIFW--WSVWNLQN---------SLSWGGQPDGLDLWAFLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASV---KPDT--

Query:  ----GDAGGGCVLQG------------ADGEGVQLARQLEFADFV----VETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRV
             +  G  VL G            A+  G   A Q+ +A  +     E+DS  LV ++  G +D S +G L+ D+R  +       + F  R+ N  
Subjt:  ----GDAGGGCVLQG------------ADGEGVQLARQLEFADFV----VETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRV

Query:  AHALAS
        A ALAS
Subjt:  AHALAS

AT3G09510.1 Ribonuclease H-like superfamily protein4.6e-1422.12Show/hide
Query:  LWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIGAMKD---NLSGSNFD
        +W L ++ K K FLWR     L T   L  R   +   C  C+   E   H  + CP     W  S  +  R       FEE I  + +   + + S+F 
Subjt:  LWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIGAMKD---NLSGSNFD

Query:  LVVIFW--WSVWNLQNSLSWGGQPDG-----LDLWAFLNDYLSTFHVGGR-----RCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGDAG
         ++  W  W +W  +N++ +    +      L   A  +D+L+      +     R +AE+ ++           WR PPA  +K N DA       +A 
Subjt:  LVVIFW--WSVWNLQNSLSWGGQPDG-----LDLWAFLNDYLSTFHVGGR-----RCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGDAG

Query:  GGCVLQGADGEGV--------QLARQLE-----------------FADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNR
        GG +++   G  +          +  LE                 +    +E D   L+ ++  GI   S +   ++D+      + + +  F  R+GN+
Subjt:  GGCVLQGADGEGV--------QLARQLE-----------------FADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNR

Query:  VAHALASLAFSY
        +AH LA    +Y
Subjt:  VAHALASLAFSY

AT3G25270.1 Ribonuclease H-like superfamily protein6.2e-1122.38Show/hide
Query:  LWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFS----QFRFEEIIGAMKDNLSGSNF
        +W+L    K K FLW+L    L T  NL +R       C  C    E   HLF++C   + +W  S         +    + + E ++ +   N     F
Subjt:  LWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFS----QFRFEEIIGAMKDNLSGSNF

Query:  DLVVIFWWSVWNLQN-------SLSWGG----QPDGLDLWAFLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGDAG
        +L +   W +W  +N       S+SW        + +  W   N Y+ + +        +    A       R  W+ PP+  +K N D +    T +A 
Subjt:  DLVVIFWWSVWNLQN-------SLSWGG----QPDGLDLWAFLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGDAG

Query:  GGCVLQGADG
         G +++  +G
Subjt:  GGCVLQGADG

AT4G29090.1 Ribonuclease H-like superfamily protein1.9e-1521.88Show/hide
Query:  VVQDRPSPSNLDR--IRAWWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKF-APFRRSFSQ
        ++  R SP  +    +   +  +W+     K + FLW+   + LP    L  R     S C+ C    E   HL + C      W  S    P    ++ 
Subjt:  VVQDRPSPSNLDR--IRAWWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKF-APFRRSFSQ

Query:  FRFEEIIGAMKDNLSGSN------FDLVVIFWWSVWNLQNSLSWGGQP-DGLDLWAFLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELK
          +  +      NL   N        LV    W +W  +N L + G+  +  ++     D L  + +   R  AE C      ++     WRPPP + +K
Subjt:  FRFEEIIGAMKDNLSGSN------FDLVVIFWWSVWNLQNSLSWGGQP-DGLDLWAFLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELK

Query:  LNVDASVKPDTGDAGGGCVLQGADGE-------------------------GVQLARQLEFADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQP
         N DA+   D    G G VL+   GE                          V    + ++   + E+DS  L++IL    +    +   + D++ +L  
Subjt:  LNVDASVKPDTGDAGGGCVLQGADGE-------------------------GVQLARQLEFADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQP

Query:  WDNNKVLFSPRQGNRVAHALASLAFSYVD
        +   K +F PR+GN +A  +A  + S+++
Subjt:  WDNNKVLFSPRQGNRVAHALASLAFSYVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGTTGTGCAGGACCGACCTTCTCCGTCGAACCTGGACAGGATTCGTGCGTGGTGGTCTGGCCTTTGGAGGCTGAATGTGCTTGGTAAGCACAAGTTTTTCCTATG
GCGATTGTTCCATGATCGGTTGCCCACCAAGGTAAACCTTCTCAAACGTGATTTTCATGTTTCTAGCCTGTGTGTCTTGTGTAATGATCCTGTTGAGGACCGTCTCCACT
TGTTCTGGAATTGCCCTGTGGTTGAAAGTATATGGTTGTGCTCCAAGTTTGCCCCATTCCGTCGGTCCTTCTCCCAATTCAGGTTTGAGGAAATCATTGGGGCGATGAAG
GATAATCTTTCAGGATCGAATTTTGACCTGGTGGTCATCTTTTGGTGGTCTGTGTGGAATCTCCAAAACAGTCTGAGTTGGGGTGGTCAACCAGATGGTCTAGATCTATG
GGCCTTTTTAAACGACTATCTCAGTACCTTCCATGTTGGTGGGAGGCGTTGCCTGGCAGAGGACTGCTTACAGGCCCGGTTAGGGGACCAGGAGGAACGCTGTGTGTGGA
GGCCACCCCCTGCTGAGGAGTTGAAGTTGAATGTTGATGCCTCTGTCAAGCCTGATACAGGGGATGCTGGGGGTGGCTGTGTACTGCAGGGGGCTGACGGGGAGGGGGTC
CAGCTTGCTCGACAGTTAGAGTTTGCTGATTTTGTGGTGGAAACCGACTCTCTAAGGTTGGTCAAAATTCTTCGTGGTGGTATTCAGGATGTTTCGGAAGTAGGGCTTCT
GATGGATGATGTTCGAATGATCCTCCAACCTTGGGACAACAACAAGGTTTTGTTTTCGCCACGCCAGGGAAACAGGGTGGCACATGCTCTGGCTAGCTTGGCCTTTTCTT
ATGTTGACCGTGTTTGGCTTGAAGAAGGGCCTAGCGAAATTTCTGATGTTCTAAGATTGTTTATTTGCATGATTCTGTTTTGGGTCCTCTCTATTAGAACTGGTTTTGAG
GCCATGCGGCTGTGTAGTGGTCCTCATTTGGATCAGTCTGCTTCTCCTAGGCAAATGCGTAGCACTTGTTGTACGGGGCCTTGTCATGACAAGTGTCCATCTTCTGATCC
TGCTTTTGGGGCTCTTTATGCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGTTGTGCAGGACCGACCTTCTCCGTCGAACCTGGACAGGATTCGTGCGTGGTGGTCTGGCCTTTGGAGGCTGAATGTGCTTGGTAAGCACAAGTTTTTCCTATG
GCGATTGTTCCATGATCGGTTGCCCACCAAGGTAAACCTTCTCAAACGTGATTTTCATGTTTCTAGCCTGTGTGTCTTGTGTAATGATCCTGTTGAGGACCGTCTCCACT
TGTTCTGGAATTGCCCTGTGGTTGAAAGTATATGGTTGTGCTCCAAGTTTGCCCCATTCCGTCGGTCCTTCTCCCAATTCAGGTTTGAGGAAATCATTGGGGCGATGAAG
GATAATCTTTCAGGATCGAATTTTGACCTGGTGGTCATCTTTTGGTGGTCTGTGTGGAATCTCCAAAACAGTCTGAGTTGGGGTGGTCAACCAGATGGTCTAGATCTATG
GGCCTTTTTAAACGACTATCTCAGTACCTTCCATGTTGGTGGGAGGCGTTGCCTGGCAGAGGACTGCTTACAGGCCCGGTTAGGGGACCAGGAGGAACGCTGTGTGTGGA
GGCCACCCCCTGCTGAGGAGTTGAAGTTGAATGTTGATGCCTCTGTCAAGCCTGATACAGGGGATGCTGGGGGTGGCTGTGTACTGCAGGGGGCTGACGGGGAGGGGGTC
CAGCTTGCTCGACAGTTAGAGTTTGCTGATTTTGTGGTGGAAACCGACTCTCTAAGGTTGGTCAAAATTCTTCGTGGTGGTATTCAGGATGTTTCGGAAGTAGGGCTTCT
GATGGATGATGTTCGAATGATCCTCCAACCTTGGGACAACAACAAGGTTTTGTTTTCGCCACGCCAGGGAAACAGGGTGGCACATGCTCTGGCTAGCTTGGCCTTTTCTT
ATGTTGACCGTGTTTGGCTTGAAGAAGGGCCTAGCGAAATTTCTGATGTTCTAAGATTGTTTATTTGCATGATTCTGTTTTGGGTCCTCTCTATTAGAACTGGTTTTGAG
GCCATGCGGCTGTGTAGTGGTCCTCATTTGGATCAGTCTGCTTCTCCTAGGCAAATGCGTAGCACTTGTTGTACGGGGCCTTGTCATGACAAGTGTCCATCTTCTGATCC
TGCTTTTGGGGCTCTTTATGCTGCTTGA
Protein sequenceShow/hide protein sequence
MLVVQDRPSPSNLDRIRAWWSGLWRLNVLGKHKFFLWRLFHDRLPTKVNLLKRDFHVSSLCVLCNDPVEDRLHLFWNCPVVESIWLCSKFAPFRRSFSQFRFEEIIGAMK
DNLSGSNFDLVVIFWWSVWNLQNSLSWGGQPDGLDLWAFLNDYLSTFHVGGRRCLAEDCLQARLGDQEERCVWRPPPAEELKLNVDASVKPDTGDAGGGCVLQGADGEGV
QLARQLEFADFVVETDSLRLVKILRGGIQDVSEVGLLMDDVRMILQPWDNNKVLFSPRQGNRVAHALASLAFSYVDRVWLEEGPSEISDVLRLFICMILFWVLSIRTGFE
AMRLCSGPHLDQSASPRQMRSTCCTGPCHDKCPSSDPAFGALYAA