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Lag0026828 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026828
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationchr10:42349412..42349858
RNA-Seq ExpressionLag0026828
SyntenyLag0026828
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK02246.1 uncharacterized protein E5676_scaffold18G00450 [Cucumis melo var. makuwa]3.9e-1944.83Show/hide
Query:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSSQAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMTAEIATQVMG
        L  + + LPI++SYK EGHLTGE PC  KFI   +G +            ++EA   A++ S  T+ VNP ++ WL    LLLGW+YNSMTAE+A Q+ G
Subjt:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSSQAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMTAEIATQVMG

Query:  CENAQELWSAVQELYG
           A++LW A+Q+L+G
Subjt:  CENAQELWSAVQELYG

XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]1.1e-1844.92Show/hide
Query:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSSQAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMTAEIATQVMG
        L  + + LPIL+ YKLEGHLT E PC + F+ +A   +N   ++ GA  +        A+ S+  + VNPL+E W+  D LLLGWLYNSMT ++A Q+MG
Subjt:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSSQAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMTAEIATQVMG

Query:  CENAQELWSAVQELYGVQ
          N ++LW A Q+ +GVQ
Subjt:  CENAQELWSAVQELYGVQ

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]1.1e-1844.92Show/hide
Query:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSSQAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMTAEIATQVMG
        L  + + LPIL+ YKLEGHLT E PC + F+ +A   +N   ++ GA  +        A+ S+  + VNPL+E W+  D LLLGWLYNSMT ++A Q+MG
Subjt:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSSQAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMTAEIATQVMG

Query:  CENAQELWSAVQELYGVQ
          N ++LW A Q+ +GVQ
Subjt:  CENAQELWSAVQELYGVQ

XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]1.1e-1844.92Show/hide
Query:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSSQAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMTAEIATQVMG
        L  + + LPIL+ YKLEGHLT E PC + F+ +A   +N   ++ GA  +        A+ S+  + VNPL+E W+  D LLLGWLYNSMT ++A Q+MG
Subjt:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSSQAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMTAEIATQVMG

Query:  CENAQELWSAVQELYGVQ
          N ++LW A Q+ +GVQ
Subjt:  CENAQELWSAVQELYGVQ

XP_038902487.1 uncharacterized protein LOC120089143 [Benincasa hispida]1.4e-2151.18Show/hide
Query:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAA--VGRTNPGSSQAGAGVSSSEAVA-------SAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMT
        L  R + LPILRSY+LEGHLTGE PC  +F  A      T P   +AG G   S   +       + A+ S P  +VNP YES   +DQLLLGWLYN MT
Subjt:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAA--VGRTNPGSSQAGAGVSSSEAVA-------SAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMT

Query:  AEIATQVMGCENAQELWSAVQELYGVQ
        AE+A QVMG EN + LW+A+QEL+G+Q
Subjt:  AEIATQVMGCENAQELWSAVQELYGVQ

TrEMBL top hitse value%identityAlignment
A0A1S4DY80 uncharacterized protein LOC1079911165.5e-1948.74Show/hide
Query:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSS-QAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMTAEIATQVM
        L  + + LPIL+SYKL  HL GE PCL K I      T P  S    AG  S E  +S+ A       VNP YE W+  D LLLGWLYNSMT E+  Q+M
Subjt:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSS-QAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMTAEIATQVM

Query:  GCENAQELWSAVQELYGVQ
        G  NA++LW A Q+L+G+Q
Subjt:  GCENAQELWSAVQELYGVQ

A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X15.5e-1944.92Show/hide
Query:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSSQAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMTAEIATQVMG
        L  + + LPIL+ YKLEGHLT E PC + F+ +A   +N   ++ GA  +        A+ S+  + VNPL+E W+  D LLLGWLYNSMT ++A Q+MG
Subjt:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSSQAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMTAEIATQVMG

Query:  CENAQELWSAVQELYGVQ
          N ++LW A Q+ +GVQ
Subjt:  CENAQELWSAVQELYGVQ

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X45.5e-1944.92Show/hide
Query:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSSQAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMTAEIATQVMG
        L  + + LPIL+ YKLEGHLT E PC + F+ +A   +N   ++ GA  +        A+ S+  + VNPL+E W+  D LLLGWLYNSMT ++A Q+MG
Subjt:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSSQAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMTAEIATQVMG

Query:  CENAQELWSAVQELYGVQ
          N ++LW A Q+ +GVQ
Subjt:  CENAQELWSAVQELYGVQ

A0A5A7VPY0 Uncharacterized protein5.5e-1948.74Show/hide
Query:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSS-QAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMTAEIATQVM
        L  + + LPIL+SYKL  HL GE PCL K I      T P  S    AG  S E  +S+ A       VNP YE W+  D LLLGWLYNSMT E+  Q+M
Subjt:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSS-QAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMTAEIATQVM

Query:  GCENAQELWSAVQELYGVQ
        G  NA++LW A Q+L+G+Q
Subjt:  GCENAQELWSAVQELYGVQ

A0A5D3BVJ1 Uncharacterized protein1.9e-1944.83Show/hide
Query:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSSQAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMTAEIATQVMG
        L  + + LPI++SYK EGHLTGE PC  KFI   +G +            ++EA   A++ S  T+ VNP ++ WL    LLLGW+YNSMTAE+A Q+ G
Subjt:  LFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSSQAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQLLLGWLYNSMTAEIATQVMG

Query:  CENAQELWSAVQELYG
           A++LW A+Q+L+G
Subjt:  CENAQELWSAVQELYG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAACATCATTATCTTCCGCTTTAAAGTTTACAAAGTTTTCCGTACTCATGCATGTGGTAGCGACTCCTTTGTACGTTTTTATCCCCTCTTTAGTCGGGTCGTTAC
ACTGCCAATTCTTAGGAGCTACAAGCTAGAAGGTCATTTGACCGGAGAACAACCGTGCCTAACAAAGTTCATTCAAGCCGCTGTCGGAAGAACCAATCCTGGTTCATCGC
AAGCTGGAGCAGGAGTGTCAAGCTCTGAGGCTGTTGCAAGTGCAGCAGCAGAATCCCTACCCACCCAAGAGGTAAATCCTTTATATGAGTCGTGGTTAGCCATAGATCAA
CTTTTGCTTGGCTGGTTGTATAACTCTATGACAGCTGAGATTGCTACCCAAGTGATGGGATGCGAAAATGCTCAAGAACTGTGGTCAGCGGTACAAGAACTTTATGGTGT
TCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAACATCATTATCTTCCGCTTTAAAGTTTACAAAGTTTTCCGTACTCATGCATGTGGTAGCGACTCCTTTGTACGTTTTTATCCCCTCTTTAGTCGGGTCGTTAC
ACTGCCAATTCTTAGGAGCTACAAGCTAGAAGGTCATTTGACCGGAGAACAACCGTGCCTAACAAAGTTCATTCAAGCCGCTGTCGGAAGAACCAATCCTGGTTCATCGC
AAGCTGGAGCAGGAGTGTCAAGCTCTGAGGCTGTTGCAAGTGCAGCAGCAGAATCCCTACCCACCCAAGAGGTAAATCCTTTATATGAGTCGTGGTTAGCCATAGATCAA
CTTTTGCTTGGCTGGTTGTATAACTCTATGACAGCTGAGATTGCTACCCAAGTGATGGGATGCGAAAATGCTCAAGAACTGTGGTCAGCGGTACAAGAACTTTATGGTGT
TCAATAG
Protein sequenceShow/hide protein sequence
MKNIIIFRFKVYKVFRTHACGSDSFVRFYPLFSRVVTLPILRSYKLEGHLTGEQPCLTKFIQAAVGRTNPGSSQAGAGVSSSEAVASAAAESLPTQEVNPLYESWLAIDQ
LLLGWLYNSMTAEIATQVMGCENAQELWSAVQELYGVQ