CuGenDBv2

Gene ID	Lag0026839
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	DNA-directed DNA polymerase, family B, conserved site
Genome location	chr10:42437343..42437891
RNA-Seq Expression	Lag0026839
Synteny	Lag0026839
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6596606.1 hypothetical protein SDJN03_09786, partial [Cucurbita argyrosperma subsp. sororia]

2.3e-53

67.96

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Query:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCWRNQSRVEPKEIASKTHDDSEAAAETVALADELEKWRELCGPSRTLFT
        MDGGLNKIATALI++FAI+FLLLLAQILFFFSR RHH    +PK+ C+YLF WR ++R+EP EIASK HDDS A+ ET A+  ELEKWR LCGP+R LFT
Subjt:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCWRNQSRVEPKEIASKTHDDSEAAAETVALADELEKWRELCGPSRTLFT

Query:  I-NEEEEREGIESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEIS
        I  EEEEREGIES E D K           D DT PF+TPCGSPPFF  SPSPTRDAGDFPV+KDSSD +    FLAIEI+
Subjt:  I-NEEEEREGIESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEIS

KAG7028145.1 hypothetical protein SDJN02_09325, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.0e-53

68.51

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Query:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCWRNQSRVEPKEIASKTHDDSEAAAETVALADELEKWRELCGPSRTLFT
        MDGGLNKIATALI++FAI+FLLLLAQILFFFSR RHH    +PK+ C+YLF WR ++R+EP EIASK HDDS A+ ET A+  ELEKWR LCGPSR LFT
Subjt:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCWRNQSRVEPKEIASKTHDDSEAAAETVALADELEKWRELCGPSRTLFT

Query:  I-NEEEEREGIESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEIS
        I  EEEEREGIES E D K           D DT PF+TPCGSPPFF  SPSPTRDAGDFPV+KDSSD +    FLAIEI+
Subjt:  I-NEEEEREGIESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEIS

XP_022943016.1 uncharacterized protein LOC111447877 [Cucurbita moschata]

1.0e-53

68.51

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Query:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCWRNQSRVEPKEIASKTHDDSEAAAETVALADELEKWRELCGPSRTLFT
        MDGGLNKIATALI++FAI+FLLLLAQILFFFSR RHH    +PK+ C+YLF WR ++R+EP EIASK +DDS A+ ET A+  ELEKWR LCGPSR LFT
Subjt:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCWRNQSRVEPKEIASKTHDDSEAAAETVALADELEKWRELCGPSRTLFT

Query:  I-NEEEEREGIESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEIS
        I  EEEEREGIES E D K           D DT PFHTPCGSPPFF  SPSPTRDAGDFPV+KDSSD +    FLAIEI+
Subjt:  I-NEEEEREGIESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEIS

XP_023005969.1 uncharacterized protein LOC111498829 [Cucurbita maxima]

3.8e-56

68.51

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Query:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCWRNQSRVEPKEIASKTHDDSEAAAETVALADELEKWRELCGPSRTLFT
        MDGGL KIATALI++FAI+FLLLLAQILFFFSR RHH    +PK+ C+YLFCWR ++R+EP EIASK HDDS A AET A+  ELEKWR LCGPSR LFT
Subjt:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCWRNQSRVEPKEIASKTHDDSEAAAETVALADELEKWRELCGPSRTLFT

Query:  I-NEEEEREGIESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEIS
        I  EEEEREG+ES E DPK           D DT PF+TPCGSPPFFT  PSPT DA DFPV+KDS D + TA FLAIEI+
Subjt:  I-NEEEEREGIESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEIS

XP_038905411.1 uncharacterized protein LOC120091450 [Benincasa hispida]

2.0e-49

62.11

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Query:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCW-RNQSRVEPKEIA--SKTHDDSEAA---AETVALADELEKWRELCGP
        MDGGLNK ATA+IAVF ++FLLL+AQIL+F SRRR      EP EKC Y+FCW RNQSR+EPKE+   SK + D E A    E  A+ +ELEKW+ELCGP
Subjt:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCW-RNQSRVEPKEIA--SKTHDDSEAA---AETVALADELEKWRELCGP

Query:  SRTLFTI-NEEEEREG-IESFEYD--PKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEIS
        SRTLFTI  EEEEREG IE F YD  PKLK        +DEDT PFHTPC SPP+FTPS SPTRD+ DFP ++  S+DN T PF  I+I+
Subjt:  SRTLFTI-NEEEEREG-IESFEYD--PKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEIS

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TPT7 Uncharacterized protein

7.5e-42

55.96

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Query:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRR--HHHAAAEPKEKCVYLFCWRNQSRVEPKEIASKTHDDSEAAAETVALA-----DELEKWRELCG
        MDGGLNKIAT LI +F   F  LLAQIL+   RRR        EP +KC YLF WRNQSR++PKEI S +  D  ++   V +      DEL KW+ELCG
Subjt:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRR--HHHAAAEPKEKCVYLFCWRNQSRVEPKEIASKTHDDSEAAAETVALA-----DELEKWRELCG

Query:  PSRTLFTINEEEEREG-IESFEYD---PKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEISGH
        PSRTLFTI EEEEREG IE FEY+   PKLK         DEDT PFHTPC SPP+ TPS SP+R   DFP ++   DDN T PF AI+I+ H
Subjt:  PSRTLFTINEEEEREG-IESFEYD---PKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEISGH

A0A6J1F429 uncharacterized protein LOC111442204

2.0e-47

60.96

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Query:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCWRNQSRVEPKEIA--SKTHDDSEAAAETVALADELEKWRELCGPSRTL
        MDGGLNKI   LIA+F ++FLLL+AQIL+  SRRRH H AA+P EKC Y FCWRNQ R+EPKEIA  SKTH + EAAA  V     +E+W+EL GPSRTL
Subjt:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCWRNQSRVEPKEIA--SKTHDDSEAAAETVALADELEKWRELCGPSRTL

Query:  FTINEEEEREGIESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPP-FFTPSP--SPTRDAGDFPVEKDSSDDNGTAPFLAIEISGH
        FTI EEEE EGIES                    T  FHTPCGSP  +FTPSP  SPTRDAG+FPV+ D  D N T PFLAIEIS H
Subjt:  FTINEEEEREGIESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPP-FFTPSP--SPTRDAGDFPVEKDSSDDNGTAPFLAIEISGH

A0A6J1FQJ7 uncharacterized protein LOC111447877

5.0e-54

68.51

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Query:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCWRNQSRVEPKEIASKTHDDSEAAAETVALADELEKWRELCGPSRTLFT
        MDGGLNKIATALI++FAI+FLLLLAQILFFFSR RHH    +PK+ C+YLF WR ++R+EP EIASK +DDS A+ ET A+  ELEKWR LCGPSR LFT
Subjt:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCWRNQSRVEPKEIASKTHDDSEAAAETVALADELEKWRELCGPSRTLFT

Query:  I-NEEEEREGIESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEIS
        I  EEEEREGIES E D K           D DT PFHTPCGSPPFF  SPSPTRDAGDFPV+KDSSD +    FLAIEI+
Subjt:  I-NEEEEREGIESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEIS

A0A6J1J6W6 uncharacterized protein LOC111481774

4.5e-47

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Query:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCWRNQSRVEPKEIA--SKTHDDSEAAAETVALADELEKWRELCGPSRTL
        MDGGLNKI   LIA+F ++FLLL+AQIL+  SRRRH H AAEP +KC Y FCWRNQSR++PKEIA  SKTH + EAAA  V      E+W+EL GPSRTL
Subjt:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCWRNQSRVEPKEIA--SKTHDDSEAAAETVALADELEKWRELCGPSRTL

Query:  FTINEEEEREGIESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPP-FFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEISGH
        FTI EEEE EG ES                    T  FHTPCGSP  +FTPSPSPTR+AG+FPV+ D  D N T PFLA+EIS H
Subjt:  FTINEEEEREGIESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPP-FFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEISGH

A0A6J1L0U5 uncharacterized protein LOC111498829

1.8e-56

68.51

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Query:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCWRNQSRVEPKEIASKTHDDSEAAAETVALADELEKWRELCGPSRTLFT
        MDGGL KIATALI++FAI+FLLLLAQILFFFSR RHH    +PK+ C+YLFCWR ++R+EP EIASK HDDS A AET A+  ELEKWR LCGPSR LFT
Subjt:  MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCWRNQSRVEPKEIASKTHDDSEAAAETVALADELEKWRELCGPSRTLFT

Query:  I-NEEEEREGIESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEIS
        I  EEEEREG+ES E DPK           D DT PF+TPCGSPPFFT  PSPT DA DFPV+KDS D + TA FLAIEI+
Subjt:  I-NEEEEREGIESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEIS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G11640.1 unknown protein

1.3e-09

34.52

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Query:  LNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCV-YLFCWR---NQSRVEPKE--IASKTHDDSEAAA---ETVALADELEKWRELCGPS
        L      L+AV     L+L A++ + F  R     +   KE    +L C +   + SR+EP    ++ +  +D  AAA   E  A AD   KWR     S
Subjt:  LNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCV-YLFCWR---NQSRVEPKE--IASKTHDDSEAAA---ETVALADELEKWRELCGPS

Query:  RTLFTINE-----EEEREGIESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGD
        R LFTI E     E++ + + S E D   +       +   D  PF TPC SPP+FTPSPSP RD  D
Subjt:  RTLFTINE-----EEEREGIESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGD

AT3G52480.1 unknown protein

3.0e-11

33.18

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Query:  GLNKIATALIAVFAISFLLLLAQILF--------------------FFSRRRHHHAAAEPKEKCVY--LFCWRNQSRVEPKEIASKTHDDSEAAAETVAL
        GL   AT L+AVFA   + + AQ  +                    F SR     A   P ++ +Y  LFC  N+       I S T     AAA  V  
Subjt:  GLNKIATALIAVFAISFLLLLAQILF--------------------FFSRRRHHHAAAEPKEKCVY--LFCWRNQSRVEPKEIASKTHDDSEAAAETVAL

Query:  ADELEKW-----RELCGPSRTLFTI-----NEEEEREG-------------IESFEYDPKLKAPSSSDTDVD----EDTPPFHTPCGSPPFFTPSPSPTR
         D   KW       LCGPS TLFTI     +E + R G             ++  E + ++ A   SD +VD      T PF TPC SPPF+TPSPSP R
Subjt:  ADELEKW-----RELCGPSRTLFTI-----NEEEEREG-------------IESFEYDPKLKAPSSSDTDVD----EDTPPFHTPCGSPPFFTPSPSPTR

Query:  DAGDFPVEKDS
        D     V ++S
Subjt:  DAGDFPVEKDS

Sequences

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CDS sequence

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ATGGACGGCGGCCTGAACAAGATCGCCACCGCTCTCATCGCCGTCTTCGCAATCTCTTTCCTACTCCTCCTCGCCCAAATCCTCTTCTTTTTCTCTCGCCGCCGCCACCA
CCACGCTGCCGCCGAACCCAAGGAAAAATGCGTCTACCTTTTCTGCTGGAGGAACCAATCGCGGGTCGAACCTAAAGAAATCGCGTCCAAAACCCACGATGATTCCGAAG
CGGCGGCGGAGACGGTGGCGCTCGCCGACGAGTTGGAGAAGTGGCGGGAACTGTGCGGACCGTCGAGAACGCTTTTCACTATCAATGAAGAAGAAGAGAGAGAGGGAATC
GAATCTTTCGAGTACGATCCTAAACTGAAGGCGCCTTCTTCTTCCGATACGGATGTGGACGAGGATACGCCGCCGTTCCATACGCCCTGCGGTTCTCCTCCGTTCTTCAC
GCCGTCGCCGTCGCCCACTCGTGACGCCGGCGACTTTCCGGTGGAAAAAGATTCTTCCGACGACAATGGAACGGCGCCGTTTTTGGCTATTGAGATTAGTGGCCACTGA

mRNA sequence

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Protein sequence

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MDGGLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAEPKEKCVYLFCWRNQSRVEPKEIASKTHDDSEAAAETVALADELEKWRELCGPSRTLFTINEEEEREGI
ESFEYDPKLKAPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFPVEKDSSDDNGTAPFLAIEISGH

Lag0026839 (gene) of Sponge gourd (AG-4) v1 genome