; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0026856 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026856
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUbiquitin-conjugating enzyme E2 variant
Genome locationchr10:42594469..42600200
RNA-Seq ExpressionLag0026856
SyntenyLag0026856
Gene Ontology termsGO:0006301 - postreplication repair (biological process)
GO:0070534 - protein K63-linked ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KEH41953.1 ubiquitin-conjugating enzyme [Medicago truncatula]5.4e-6594.57Show/hide
Query:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQVFVESKKFGLLANWQREYT
        MTLGS GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYP+KP   VE KKFGLLANWQREY+
Subjt:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQVFVESKKFGLLANWQREYT

Query:  MEDILTQLKKEMAAPHNRKLVQPPEGTYF
        MEDILTQLKKEMAAPHNRKLVQPPEGTYF
Subjt:  MEDILTQLKKEMAAPHNRKLVQPPEGTYF

XP_004136503.1 ubiquitin-conjugating enzyme E2 variant 1C [Cucumis sativus]9.2e-6585.62Show/hide
Query:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F
        MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYP+KP                    
Subjt:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F

Query:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
        VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
Subjt:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF

XP_021636663.1 ubiquitin-conjugating enzyme E2 variant 1C isoform X2 [Hevea brasiliensis]9.2e-6585.62Show/hide
Query:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F
        MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYP+KP                    
Subjt:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F

Query:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
        VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
Subjt:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF

XP_022144653.1 ubiquitin-conjugating enzyme E2 variant 1C [Momordica charantia]3.2e-6586.3Show/hide
Query:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F
        MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKP                    
Subjt:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F

Query:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
        VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
Subjt:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF

XP_022983154.1 ubiquitin-conjugating enzyme E2 variant 1C [Cucurbita maxima]9.2e-6585.62Show/hide
Query:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F
        MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKP                    
Subjt:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F

Query:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
        VESKKFGLLANWQREY+MEDILTQLKKEMAAPHNRKLVQPPEGTYF
Subjt:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF

TrEMBL top hitse value%identityAlignment
A0A072VKL3 Ubiquitin-conjugating enzyme2.6e-6594.57Show/hide
Query:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQVFVESKKFGLLANWQREYT
        MTLGS GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYP+KP   VE KKFGLLANWQREY+
Subjt:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQVFVESKKFGLLANWQREYT

Query:  MEDILTQLKKEMAAPHNRKLVQPPEGTYF
        MEDILTQLKKEMAAPHNRKLVQPPEGTYF
Subjt:  MEDILTQLKKEMAAPHNRKLVQPPEGTYF

A0A0A0LE42 UBC core domain-containing protein4.5e-6585.62Show/hide
Query:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F
        MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYP+KP                    
Subjt:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F

Query:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
        VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
Subjt:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF

A0A6J1CTV6 ubiquitin-conjugating enzyme E2 variant 1C1.5e-6586.3Show/hide
Query:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F
        MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKP                    
Subjt:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F

Query:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
        VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
Subjt:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF

A0A6J1J6I4 ubiquitin-conjugating enzyme E2 variant 1C4.5e-6585.62Show/hide
Query:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F
        MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKP                    
Subjt:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F

Query:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
        VESKKFGLLANWQREY+MEDILTQLKKEMAAPHNRKLVQPPEGTYF
Subjt:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF

A0A803QMF4 Uncharacterized protein3.4e-6585.52Show/hide
Query:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKP----------------QVFV
        MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYP++P                +  V
Subjt:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKP----------------QVFV

Query:  ESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
        ESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
Subjt:  ESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF

SwissProt top hitse value%identityAlignment
O74983 Ubiquitin-conjugating enzyme spm28.7e-3449.63Show/hide
Query:  VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQVF-----------------VESKKFGLLAN
        VPRNF+LLEELE+GEKG+G+ + SYG+ + DDI +  W  TI+GP ++VHE RIY LK+ CD +YPD P +                  V   K   L +
Subjt:  VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQVF-----------------VESKKFGLLAN

Query:  WQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
        W+REY+ME +L  LKKEMA+  NRKL QPPEG+ F
Subjt:  WQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF

Q93YP0 Ubiquitin-conjugating enzyme E2 variant 1A5.3e-4763.83Show/hide
Query:  LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------FVE
        + S  + VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDIYM+SWTGTI+GP NT +EG+I+QLKLFC K+YP+ P                    VE
Subjt:  LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------FVE

Query:  SKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG
           F +L NW+REYTMEDIL +LKKEM   HNRKL QPPEG
Subjt:  SKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG

Q9CAB6 Ubiquitin-conjugating enzyme E2 variant 1B7.6e-4662.41Show/hide
Query:  LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------FVE
        +GS    VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDI M+SWTGTI+GPHNT +EG+I+QLKLFC KDYP+ P                    V+
Subjt:  LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------FVE

Query:  SKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG
           F +L+NW+RE+TMED+L QLKKEM +  NRKL QP EG
Subjt:  SKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG

Q9SJ44 Ubiquitin-conjugating enzyme E2 variant 1C1.8e-6381.51Show/hide
Query:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F
        MTLGS GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYP+KP                    
Subjt:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F

Query:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
        V+SKKFG+LANWQR+YTMEDILTQLKKEMAA HNRKLVQPPEGT+F
Subjt:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF

Q9SVD7 Ubiquitin-conjugating enzyme E2 variant 1D1.4e-6380.82Show/hide
Query:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F
        MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYP+KP                    
Subjt:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F

Query:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
        V+ KKFGLLANWQREYTMEDIL QLKKEM+  HNRKLVQPPEGT F
Subjt:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF

Arabidopsis top hitse value%identityAlignment
AT2G36060.1 MMS ZWEI homologue 31.3e-6481.51Show/hide
Query:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F
        MTLGS GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYP+KP                    
Subjt:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F

Query:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
        V+SKKFG+LANWQR+YTMEDILTQLKKEMAA HNRKLVQPPEGT+F
Subjt:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF

AT2G36060.2 MMS ZWEI homologue 33.2e-6380.95Show/hide
Query:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHN-TVHEGRIYQLKLFCDKDYPDKPQV-----------------
        MTLGS GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHN TVHEGRIYQLKLFCDKDYP+KP                   
Subjt:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHN-TVHEGRIYQLKLFCDKDYPDKPQV-----------------

Query:  FVESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
         V+SKKFG+LANWQR+YTMEDILTQLKKEMAA HNRKLVQPPEGT+F
Subjt:  FVESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF

AT2G36060.3 MMS ZWEI homologue 39.8e-6582.07Show/hide
Query:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQVF----------------V
        MTLGS GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYP+KP                   V
Subjt:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQVF----------------V

Query:  ESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
        +SKKFG+LANWQR+YTMEDILTQLKKEMAA HNRKLVQPPEGT+F
Subjt:  ESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF

AT3G52560.1 ubiquitin E2 variant 1D-49.8e-6580.82Show/hide
Query:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F
        MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYP+KP                    
Subjt:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQV-----------------F

Query:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
        V+ KKFGLLANWQREYTMEDIL QLKKEM+  HNRKLVQPPEGT F
Subjt:  VESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF

AT3G52560.2 ubiquitin E2 variant 1D-42.4e-6380.27Show/hide
Query:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHN-TVHEGRIYQLKLFCDKDYPDKPQV-----------------
        MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHN TVHEGRIYQLKLFCDKDYP+KP                   
Subjt:  MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHN-TVHEGRIYQLKLFCDKDYPDKPQV-----------------

Query:  FVESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF
         V+ KKFGLLANWQREYTMEDIL QLKKEM+  HNRKLVQPPEGT F
Subjt:  FVESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCTCGGTTCAGGAGGCTCGAGTGTTGTTGTTCCTAGGAACTTCAGGTTGCTGGAGGAACTTGAACGTGGAGAAAAGGGCATTGGTGATGGTACTGTGAGCTATGG
AATGGATGATGGAGATGACATTTATATGCGTTCATGGACTGGCACCATTATTGGTCCACACAATACGGTACATGAAGGTAGAATTTATCAATTGAAGCTGTTCTGTGATA
AAGATTACCCTGATAAGCCCCAAGTGTTCGTCGAGTCAAAGAAATTTGGACTTCTTGCAAATTGGCAGCGAGAGTACACCATGGAGGATATACTCACACAGCTGAAAAAG
GAAATGGCAGCCCCACATAACCGAAAGCTGGTCCAACCTCCAGAAGGCACCTATTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGCTCGGTTCAGGAGGCTCGAGTGTTGTTGTTCCTAGGAACTTCAGGTTGCTGGAGGAACTTGAACGTGGAGAAAAGGGCATTGGTGATGGTACTGTGAGCTATGG
AATGGATGATGGAGATGACATTTATATGCGTTCATGGACTGGCACCATTATTGGTCCACACAATACGGTACATGAAGGTAGAATTTATCAATTGAAGCTGTTCTGTGATA
AAGATTACCCTGATAAGCCCCAAGTGTTCGTCGAGTCAAAGAAATTTGGACTTCTTGCAAATTGGCAGCGAGAGTACACCATGGAGGATATACTCACACAGCTGAAAAAG
GAAATGGCAGCCCCACATAACCGAAAGCTGGTCCAACCTCCAGAAGGCACCTATTTCTAG
Protein sequenceShow/hide protein sequence
MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPQVFVESKKFGLLANWQREYTMEDILTQLKK
EMAAPHNRKLVQPPEGTYF