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Lag0026941 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0026941
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr10:43543691..43543993
RNA-Seq ExpressionLag0026941
SyntenyLag0026941
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEE68778.1 hypothetical protein OsJ_27492 [Oryza sativa Japonica Group]3.7e-0537.97Show/hide
Query:  KLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKILH
        KLN DA  +PD+GE G G ++    G VL+A+C  L RC S   AE  A  +G++L  +      ++E+D+ S V  L+
Subjt:  KLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKILH

KAF7802400.1 uncharacterized protein G2W53_041511 [Senna tora]4.0e-0738.1Show/hide
Query:  RELKLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKILHGD
        R LKLN DAS+R D G+   GC++ +  G  L A    +  C+SV++AE  A+Y+G+ + +++     +VE DS S +K+L+G+
Subjt:  RELKLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKILHGD

MQM20978.1 hypothetical protein [Colocasia esculenta]3.7e-0536.14Show/hide
Query:  LKLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKILHGDL
        LKLN D + +P + +AGGG +L + +GE ++A  +  +   S   AE +AL  G+ + R   F   +VETDSLS ++ + G +
Subjt:  LKLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKILHGDL

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]1.7e-0539.02Show/hide
Query:  LKLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKILHGD
        LK+N DA+ R +S  AG G ++ +  G V + A   L R   VD  EG+A+Y+G+ L  +  F  F +ETDSL    +L  D
Subjt:  LKLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKILHGD

XP_030964226.1 uncharacterized protein LOC115985426 [Quercus lobata]3.7e-0532.89Show/hide
Query:  KLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVK
        K+N+D +   D   +  G ++ +  G+V+ A C  L  C++VD  EG A+  G+ L +++D ++ ++E+DSLS V+
Subjt:  KLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVK

TrEMBL top hitse value%identityAlignment
A0A0P0VFG5 Os02g0175302 protein4.0e-0539.24Show/hide
Query:  LKLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKIL
        +KLN D S +PD+G+ G G VL N  GEV+ AAC  +QRC     AE  A  +G+ +  Q      ++ETD    + +L
Subjt:  LKLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKIL

A0A6J1DBJ7 uncharacterized protein LOC1110189738.1e-0639.02Show/hide
Query:  LKLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKILHGD
        LK+N DA+ R +S  AG G ++ +  G V + A   L R   VD  EG+A+Y+G+ L  +  F  F +ETDSL    +L  D
Subjt:  LKLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKILHGD

A0A803Q185 Uncharacterized protein1.1e-0535.8Show/hide
Query:  ELKLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKILH
        E+K+N DAS++  +G +G GCV+    G+VL A+   +QR +S    E  A+ KG+Q+  Q     F +E D L  ++++H
Subjt:  ELKLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKILH

B9F3B9 RNase H domain-containing protein4.0e-0539.24Show/hide
Query:  LKLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKIL
        +KLN D S +PD+G+ G G VL N  GEV+ AAC  +QRC     AE  A  +G+ +  Q      ++ETD    + +L
Subjt:  LKLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKIL

B9G161 Reverse transcriptase domain-containing protein1.8e-0537.97Show/hide
Query:  KLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKILH
        KLN DA  +PD+GE G G ++    G VL+A+C  L RC S   AE  A  +G++L  +      ++E+D+ S V  L+
Subjt:  KLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKILH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGAAAAGATGTTGCAACTTTAGTATATTATTAAGAATTGGTAGGGAGTTGAAGCTTAACGCGGATGCTTCTATTCGACCGGATTCAGGTGAAGCTGGAGGTGGTTG
TGTGTTGTGTAATGTTGATGGTGAGGTCCTTATGGCGGCATGTTTGACTCTACAACGGTGTTGGAGTGTGGATTTGGCTGAGGGTTGGGCTTTGTATAAAGGGGTCCAAC
TTGTTCGACAGATAGACTTTTCTGAATTTGTGGTGGAGACTGATTCTCTGAGCTTTGTCAAAATTCTCCATGGTGATTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGAAAAGATGTTGCAACTTTAGTATATTATTAAGAATTGGTAGGGAGTTGAAGCTTAACGCGGATGCTTCTATTCGACCGGATTCAGGTGAAGCTGGAGGTGGTTG
TGTGTTGTGTAATGTTGATGGTGAGGTCCTTATGGCGGCATGTTTGACTCTACAACGGTGTTGGAGTGTGGATTTGGCTGAGGGTTGGGCTTTGTATAAAGGGGTCCAAC
TTGTTCGACAGATAGACTTTTCTGAATTTGTGGTGGAGACTGATTCTCTGAGCTTTGTCAAAATTCTCCATGGTGATTTGTAG
Protein sequenceShow/hide protein sequence
MWKRCCNFSILLRIGRELKLNADASIRPDSGEAGGGCVLCNVDGEVLMAACLTLQRCWSVDLAEGWALYKGVQLVRQIDFSEFVVETDSLSFVKILHGDL